RNA–Protein interactions for RNA: ENST00000448526.6

CDKN1A-204, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDKN1A, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-204ENST00000448526 ERBINQ96RT1 1412 aa23.67■■□□□ 1.38
CDKN1A-204ENST00000448526 CCDC144AA2RUR9 1427 aa23.66■■□□□ 1.38
CDKN1A-204ENST00000448526 CARD11Q9BXL7 1154 aa23.66■■□□□ 1.38
CDKN1A-204ENST00000448526 WDR7Q9Y4E6 1490 aa23.65■■□□□ 1.38
CDKN1A-204ENST00000448526 ARAP3Q8WWN8 1544 aa23.64■■□□□ 1.38
CDKN1A-204ENST00000448526 HNRNPUQ00839 825 aaKnown RBP eCLIP23.62■■□□□ 1.37
CDKN1A-204ENST00000448526 DHX29Q7Z478 1369 aaKnown RBP23.62■■□□□ 1.37
CDKN1A-204ENST00000448526 AFAP1Q8N556 730 aa23.62■■□□□ 1.37
CDKN1A-204ENST00000448526 POLR3GLQ9BT43 218 aa23.6■■□□□ 1.37
CDKN1A-204ENST00000448526 RGL3Q3MIN7 710 aa23.6■■□□□ 1.37
CDKN1A-204ENST00000448526 PRAG1Q86YV5 1406 aa23.59■■□□□ 1.37
CDKN1A-204ENST00000448526 TRPM1Q7Z4N2 1603 aa23.59■■□□□ 1.37
CDKN1A-204ENST00000448526 SPAG9O60271 1321 aaKnown RBP23.59■■□□□ 1.37
CDKN1A-204ENST00000448526 A2MP01023 1474 aa23.58■■□□□ 1.37
CDKN1A-204ENST00000448526 ZFYVE16Q7Z3T8 1539 aa23.58■■□□□ 1.37
CDKN1A-204ENST00000448526 ARID4BQ4LE39 1312 aaPredicted RBP23.58■■□□□ 1.37
CDKN1A-204ENST00000448526 ST20-MTHFSA0A0A6YYL1 179 aa23.57■■□□□ 1.36
CDKN1A-204ENST00000448526 FKBP8Q14318 412 aa23.57■■□□□ 1.36
CDKN1A-204ENST00000448526 ABCA9Q8IUA7 1624 aa23.57■■□□□ 1.36
CDKN1A-204ENST00000448526 RTEL1-TNFRSF6BF6WH68 1400 aa23.56■■□□□ 1.36
CDKN1A-204ENST00000448526 ATP10AO60312 1499 aa23.56■■□□□ 1.36
CDKN1A-204ENST00000448526 ROCK2O75116 1388 aaKnown RBP23.56■■□□□ 1.36
CDKN1A-204ENST00000448526 MRS2Q9HD23 443 aa23.56■■□□□ 1.36
CDKN1A-204ENST00000448526 FANCAO15360 1455 aa23.55■■□□□ 1.36
CDKN1A-204ENST00000448526 NBPF1Q3BBV0 1214 aa23.52■■□□□ 1.36
CDKN1A-204ENST00000448526 ASXL2Q76L83 1435 aa23.52■■□□□ 1.36
CDKN1A-204ENST00000448526 FAM9BQ8IZU0 186 aa23.51■■□□□ 1.35
CDKN1A-204ENST00000448526 BCANQ96GW7 911 aa23.51■■□□□ 1.35
CDKN1A-204ENST00000448526 E9PCH4 1651 aa23.5■■□□□ 1.35
CDKN1A-204ENST00000448526 INO80Q9ULG1 1556 aaPredicted RBP23.49■■□□□ 1.35
CDKN1A-204ENST00000448526 CNGB1Q14028 1251 aaPredicted RBP23.48■■□□□ 1.35
CDKN1A-204ENST00000448526 ATP7AQ04656 1500 aa23.48■■□□□ 1.35
CDKN1A-204ENST00000448526 GPRASP1Q5JY77 1395 aa23.47■■□□□ 1.35
CDKN1A-204ENST00000448526 DEPDC5O75140 1603 aa23.47■■□□□ 1.35
CDKN1A-204ENST00000448526 ADGRL1O94910 1474 aa23.46■■□□□ 1.35
CDKN1A-204ENST00000448526 SCAPERQ9BY12 1400 aa23.45■■□□□ 1.35
CDKN1A-204ENST00000448526 OSCARQ8IYS5 282 aa23.44■■□□□ 1.34
CDKN1A-204ENST00000448526 NEFLP07196 543 aa23.44■■□□□ 1.34
CDKN1A-204ENST00000448526 LAMC1P11047 1609 aa23.43■■□□□ 1.34
CDKN1A-204ENST00000448526 PRDM15P57071 1507 aaPredicted RBP23.42■■□□□ 1.34
CDKN1A-204ENST00000448526 EIF2AK4Q9P2K8 1649 aaKnown RBP23.41■■□□□ 1.34
CDKN1A-204ENST00000448526 SPHKAPQ2M3C7 1700 aa23.4■■□□□ 1.34
CDKN1A-204ENST00000448526 TRPM2O94759 1503 aa23.4■■□□□ 1.34
CDKN1A-204ENST00000448526 VWDEQ8N2E2 1590 aa23.39■■□□□ 1.34
CDKN1A-204ENST00000448526 PTPRTO14522 1441 aa23.38■■□□□ 1.33
CDKN1A-204ENST00000448526 TET3O43151 1660 aa23.38■■□□□ 1.33
CDKN1A-204ENST00000448526 CLTCL1P53675 1640 aa23.37■■□□□ 1.33
CDKN1A-204ENST00000448526 KIF3BO15066 747 aa23.36■■□□□ 1.33
CDKN1A-204ENST00000448526 MYT1LQ9UL68 1186 aa23.36■■□□□ 1.33
CDKN1A-204ENST00000448526 CEP152O94986 1710 aa23.36■■□□□ 1.33
CDKN1A-204ENST00000448526 ZBED9Q6R2W3 1325 aa23.36■■□□□ 1.33
CDKN1A-204ENST00000448526 MROH1Q8NDA8 1641 aa23.36■■□□□ 1.33
CDKN1A-204ENST00000448526 RNF17Q9BXT8 1623 aaKnown RBP23.35■■□□□ 1.33
CDKN1A-204ENST00000448526 TESK2Q96S53 571 aa23.35■■□□□ 1.33
CDKN1A-204ENST00000448526 KIDINS220Q9ULH0 1771 aa23.35■■□□□ 1.33
CDKN1A-204ENST00000448526 MADDQ8WXG6 1647 aa23.33■■□□□ 1.33
CDKN1A-204ENST00000448526 COL17A1Q9UMD9 1497 aaPredicted RBP23.33■■□□□ 1.33
CDKN1A-204ENST00000448526 NPM1P06748 294 aaKnown RBP eCLIP23.33■■□□□ 1.32
CDKN1A-204ENST00000448526 DISP3Q9P2K9 1392 aa23.32■■□□□ 1.32
CDKN1A-204ENST00000448526 KANK1Q14678 1352 aa23.32■■□□□ 1.32
CDKN1A-204ENST00000448526 PNISRQ8TF01 805 aaKnown RBP23.28■■□□□ 1.32
CDKN1A-204ENST00000448526 ZNF518AQ6AHZ1 1483 aa23.28■■□□□ 1.32
CDKN1A-204ENST00000448526 TSHZ2Q9NRE2 1034 aa23.27■■□□□ 1.32
CDKN1A-204ENST00000448526 CD109Q6YHK3 1445 aa23.27■■□□□ 1.32
CDKN1A-204ENST00000448526 IRX6P78412 446 aaPredicted RBP23.27■■□□□ 1.32
CDKN1A-204ENST00000448526 PER1O15534 1290 aaPredicted RBP23.26■■□□□ 1.31
CDKN1A-204ENST00000448526 TMC1Q8TDI8 760 aa23.25■■□□□ 1.31
CDKN1A-204ENST00000448526 KTN1Q86UP2 1357 aaKnown RBP23.24■■□□□ 1.31
CDKN1A-204ENST00000448526 MYBBP1AQ9BQG0 1328 aaKnown RBP23.24■■□□□ 1.31
CDKN1A-204ENST00000448526 RALBP1Q15311 655 aa23.24■■□□□ 1.31
CDKN1A-204ENST00000448526 IQGAP1P46940 1657 aa23.24■■□□□ 1.31
CDKN1A-204ENST00000448526 UGGT1Q9NYU2 1555 aa23.24■■□□□ 1.31
CDKN1A-204ENST00000448526 EFCAB6Q5THR3 1501 aa23.22■■□□□ 1.31
CDKN1A-204ENST00000448526 POGZQ7Z3K3 1410 aa23.22■■□□□ 1.31
CDKN1A-204ENST00000448526 BRD4O60885 1362 aaPredicted RBP23.22■■□□□ 1.31
CDKN1A-204ENST00000448526 CFAP74Q9C0B2 1584 aa23.21■■□□□ 1.31
CDKN1A-204ENST00000448526 PPRC1Q5VV67 1664 aaKnown RBP23.21■■□□□ 1.31
CDKN1A-204ENST00000448526 TMF1P82094 1093 aa23.21■■□□□ 1.31
CDKN1A-204ENST00000448526 PARD3Q8TEW0 1356 aa23.21■■□□□ 1.31
CDKN1A-204ENST00000448526 LRPPRCP42704 1394 aaKnown RBP23.19■■□□□ 1.3
CDKN1A-204ENST00000448526 FRMPD1Q5SYB0 1578 aa23.19■■□□□ 1.3
CDKN1A-204ENST00000448526 STAC3Q96MF2 364 aa23.18■■□□□ 1.3
CDKN1A-204ENST00000448526 NEURL4Q96JN8 1562 aa23.18■■□□□ 1.3
CDKN1A-204ENST00000448526 SENP3-EIF4A1A0A087X0R7 540 aa23.18■■□□□ 1.3
CDKN1A-204ENST00000448526 PANK3Q9H999 370 aa23.17■■□□□ 1.3
CDKN1A-204ENST00000448526 LMTK2Q8IWU2 1503 aa23.17■■□□□ 1.3
CDKN1A-204ENST00000448526 MLH3Q9UHC1 1453 aa23.16■■□□□ 1.3
CDKN1A-204ENST00000448526 SCAF11Q99590 1463 aaKnown RBP23.15■■□□□ 1.3
CDKN1A-204ENST00000448526 KIF1BO60333 1816 aa23.15■■□□□ 1.3
CDKN1A-204ENST00000448526 HECW2Q9P2P5 1572 aa23.14■■□□□ 1.3
CDKN1A-204ENST00000448526 SMG6Q86US8 1419 aaKnown RBP23.14■■□□□ 1.29
CDKN1A-204ENST00000448526 MROH2AA6NES4 1674 aa23.14■■□□□ 1.29
CDKN1A-204ENST00000448526 KIAA1210Q9ULL0 1709 aa23.13■■□□□ 1.29
CDKN1A-204ENST00000448526 ABCA6Q8N139 1617 aa23.12■■□□□ 1.29
CDKN1A-204ENST00000448526 MAP3K4Q9Y6R4 1608 aa23.12■■□□□ 1.29
CDKN1A-204ENST00000448526 CC2D1BQ5T0F9 858 aaKnown RBP23.12■■□□□ 1.29
CDKN1A-204ENST00000448526 NLRP13Q86W25 1043 aa23.12■■□□□ 1.29
CDKN1A-204ENST00000448526 IFT172Q9UG01 1749 aa23.11■■□□□ 1.29
CDKN1A-204ENST00000448526 ADGRF5Q8IZF2 1346 aa23.11■■□□□ 1.29
CDKN1A-204ENST00000448526 WASHC2CQ9Y4E1 1318 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms