RNA–Protein interactions for RNA: ENST00000445654.2

SHANK2-209, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 522 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-209ENST00000445654 TNRQ92752 1358 aa22.78■■□□□ 1.24
SHANK2-209ENST00000445654 ANKLE2Q86XL3 938 aa22.78■■□□□ 1.24
SHANK2-209ENST00000445654 NEURL4Q96JN8 1562 aa22.78■■□□□ 1.24
SHANK2-209ENST00000445654 RTEL1-TNFRSF6BF6WH68 1400 aa22.75■■□□□ 1.23
SHANK2-209ENST00000445654 THEMISQ8N1K5 641 aaPredicted RBP22.75■■□□□ 1.23
SHANK2-209ENST00000445654 PZPP20742 1482 aa22.73■■□□□ 1.23
SHANK2-209ENST00000445654 DHX29Q7Z478 1369 aaKnown RBP22.72■■□□□ 1.23
SHANK2-209ENST00000445654 NLRP1Q9C000 1473 aa22.72■■□□□ 1.23
SHANK2-209ENST00000445654 DEPDC5O75140 1603 aa22.71■■□□□ 1.23
SHANK2-209ENST00000445654 MED14O60244 1454 aa22.71■■□□□ 1.23
SHANK2-209ENST00000445654 KDM5DQ9BY66 1539 aa22.71■■□□□ 1.23
SHANK2-209ENST00000445654 VWDEQ8N2E2 1590 aa22.71■■□□□ 1.23
SHANK2-209ENST00000445654 NPHP4O75161 1426 aaPredicted RBP22.69■■□□□ 1.22
SHANK2-209ENST00000445654 MTUS2Q5JR59 1369 aa22.69■■□□□ 1.22
SHANK2-209ENST00000445654 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.67■■□□□ 1.22
SHANK2-209ENST00000445654 UGGT1Q9NYU2 1555 aa22.67■■□□□ 1.22
SHANK2-209ENST00000445654 WASHC2CQ9Y4E1 1318 aa22.65■■□□□ 1.22
SHANK2-209ENST00000445654 SYNMO15061 1565 aa22.65■■□□□ 1.22
SHANK2-209ENST00000445654 KIF3BO15066 747 aa22.65■■□□□ 1.22
SHANK2-209ENST00000445654 FBXO31Q5XUX0 539 aaPredicted RBP22.65■■□□□ 1.22
SHANK2-209ENST00000445654 MIA2Q96PC5 1412 aa22.65■■□□□ 1.22
SHANK2-209ENST00000445654 RNF17Q9BXT8 1623 aaKnown RBP22.64■■□□□ 1.22
SHANK2-209ENST00000445654 MBD5Q9P267 1494 aa22.64■■□□□ 1.21
SHANK2-209ENST00000445654 IQGAP1P46940 1657 aa22.64■■□□□ 1.21
SHANK2-209ENST00000445654 ALKQ9UM73 1620 aa22.62■■□□□ 1.21
SHANK2-209ENST00000445654 RSPH4AQ5TD94 716 aa22.62■■□□□ 1.21
SHANK2-209ENST00000445654 TIAM1Q13009 1591 aa22.59■■□□□ 1.21
SHANK2-209ENST00000445654 EHBP1L1Q8N3D4 1523 aa22.58■■□□□ 1.21
SHANK2-209ENST00000445654 LRRC7Q96NW7 1537 aa22.58■■□□□ 1.21
SHANK2-209ENST00000445654 CCDC141Q6ZP82 1450 aa22.58■■□□□ 1.2
SHANK2-209ENST00000445654 ZNF644Q9H582 1327 aaPredicted RBP22.57■■□□□ 1.2
SHANK2-209ENST00000445654 CEP162Q5TB80 1403 aa22.53■■□□□ 1.2
SHANK2-209ENST00000445654 ZC3H13Q5T200 1668 aaKnown RBP22.52■■□□□ 1.2
SHANK2-209ENST00000445654 STRCP1A6NGW2 1772 aa22.5■■□□□ 1.19
SHANK2-209ENST00000445654 CHIC1Q5VXU3 224 aa22.49■■□□□ 1.19
SHANK2-209ENST00000445654 SENP3Q9H4L4 574 aaPredicted RBP22.49■■□□□ 1.19
SHANK2-209ENST00000445654 TSPY4P0CV99 314 aa22.48■■□□□ 1.19
SHANK2-209ENST00000445654 TSPY10P0CW01 314 aa22.48■■□□□ 1.19
SHANK2-209ENST00000445654 CAMSAP2Q08AD1 1489 aa22.47■■□□□ 1.19
SHANK2-209ENST00000445654 RGS17Q9UGC6 210 aaPredicted RBP22.45■■□□□ 1.18
SHANK2-209ENST00000445654 ARHGEF5Q12774 1597 aa22.45■■□□□ 1.18
SHANK2-209ENST00000445654 SCAF11Q99590 1463 aaKnown RBP22.44■■□□□ 1.18
SHANK2-209ENST00000445654 ABCC3O15438 1527 aa22.43■■□□□ 1.18
SHANK2-209ENST00000445654 ERVK-7P63135 1459 aa22.43■■□□□ 1.18
SHANK2-209ENST00000445654 FAM135BQ49AJ0 1406 aa22.42■■□□□ 1.18
SHANK2-209ENST00000445654 UBR1Q8IWV7 1749 aa22.41■■□□□ 1.18
SHANK2-209ENST00000445654 EIF2AK4Q9P2K8 1649 aaKnown RBP22.41■■□□□ 1.18
SHANK2-209ENST00000445654 EID1Q9Y6B2 187 aa22.39■■□□□ 1.17
SHANK2-209ENST00000445654 SLIT1O75093 1534 aa22.38■■□□□ 1.17
SHANK2-209ENST00000445654 NCOA2Q15596 1464 aa22.37■■□□□ 1.17
SHANK2-209ENST00000445654 ARHGAP23Q9P227 1491 aa22.36■■□□□ 1.17
SHANK2-209ENST00000445654 TXNDC2Q86VQ3 553 aa22.36■■□□□ 1.17
SHANK2-209ENST00000445654 MAST1Q9Y2H9 1570 aa22.35■■□□□ 1.17
SHANK2-209ENST00000445654 XIRP1Q702N8 1843 aaKnown RBP22.34■■□□□ 1.17
SHANK2-209ENST00000445654 POTEAQ6S8J7 498 aa22.33■■□□□ 1.17
SHANK2-209ENST00000445654 LRRC9Q6ZRR7 1453 aa22.33■■□□□ 1.16
SHANK2-209ENST00000445654 LTKP29376 864 aa22.3■■□□□ 1.16
SHANK2-209ENST00000445654 CEP152O94986 1710 aa22.29■■□□□ 1.16
SHANK2-209ENST00000445654 ARHGAP31Q2M1Z3 1444 aa22.29■■□□□ 1.16
SHANK2-209ENST00000445654 MROH1Q8NDA8 1641 aa22.28■■□□□ 1.16
SHANK2-209ENST00000445654 ROBO1Q9Y6N7 1651 aa22.27■■□□□ 1.16
SHANK2-209ENST00000445654 TMEM94Q12767 1356 aa22.26■■□□□ 1.15
SHANK2-209ENST00000445654 CFAP65Q6ZU64 1925 aaKnown RBP22.26■■□□□ 1.15
SHANK2-209ENST00000445654 KCNA6P17658 529 aa22.25■■□□□ 1.15
SHANK2-209ENST00000445654 STAG3Q9UJ98 1225 aa22.25■■□□□ 1.15
SHANK2-209ENST00000445654 KDM5AP29375 1690 aaKnown RBP22.25■■□□□ 1.15
SHANK2-209ENST00000445654 DUOX2Q9NRD8 1548 aa22.25■■□□□ 1.15
SHANK2-209ENST00000445654 TMEM2Q9UHN6 1383 aa22.24■■□□□ 1.15
SHANK2-209ENST00000445654 PROSER2Q86WR7 435 aaPredicted RBP22.22■■□□□ 1.15
SHANK2-209ENST00000445654 JCADQ9P266 1359 aa22.21■■□□□ 1.15
SHANK2-209ENST00000445654 NKTRP30414 1462 aaKnown RBP22.21■■□□□ 1.15
SHANK2-209ENST00000445654 PRDM15P57071 1507 aaPredicted RBP22.21■■□□□ 1.15
SHANK2-209ENST00000445654 PIK3C2BO00750 1634 aa22.2■■□□□ 1.15
SHANK2-209ENST00000445654 MSH6P52701 1360 aa22.19■■□□□ 1.14
SHANK2-209ENST00000445654 EFCAB6Q5THR3 1501 aa22.19■■□□□ 1.14
SHANK2-209ENST00000445654 MAP3K1Q13233 1512 aa22.18■■□□□ 1.14
SHANK2-209ENST00000445654 KANK1Q14678 1352 aa22.18■■□□□ 1.14
SHANK2-209ENST00000445654 ERBINQ96RT1 1412 aa22.17■■□□□ 1.14
SHANK2-209ENST00000445654 SETD1AO15047 1707 aaKnown RBP22.17■■□□□ 1.14
SHANK2-209ENST00000445654 PHLPP1O60346 1717 aa22.17■■□□□ 1.14
SHANK2-209ENST00000445654 MYOM3Q5VTT5 1437 aa22.16■■□□□ 1.14
SHANK2-209ENST00000445654 NWD1Q149M9 1564 aa22.15■■□□□ 1.14
SHANK2-209ENST00000445654 TET3O43151 1660 aa22.14■■□□□ 1.13
SHANK2-209ENST00000445654 ZNF772Q68DY9 489 aaPredicted RBP22.13■■□□□ 1.13
SHANK2-209ENST00000445654 SLAIN2Q9P270 581 aa22.13■■□□□ 1.13
SHANK2-209ENST00000445654 KIF15Q9NS87 1388 aa22.12■■□□□ 1.13
SHANK2-209ENST00000445654 SPATA31A6Q5VVP1 1343 aa22.11■■□□□ 1.13
SHANK2-209ENST00000445654 SLC26A8Q96RN1 970 aa22.11■■□□□ 1.13
SHANK2-209ENST00000445654 FGD6Q6ZV73 1430 aa22.1■■□□□ 1.13
SHANK2-209ENST00000445654 MEX3CQ5U5Q3 659 aaKnown RBP22.08■■□□□ 1.13
SHANK2-209ENST00000445654 LMTK2Q8IWU2 1503 aa22.07■■□□□ 1.12
SHANK2-209ENST00000445654 IDI1Q13907 227 aa22.07■■□□□ 1.12
SHANK2-209ENST00000445654 UPF1Q92900 1129 aaKnown RBP eCLIP22.07■■□□□ 1.12
SHANK2-209ENST00000445654 BCANQ96GW7 911 aa22.07■■□□□ 1.12
SHANK2-209ENST00000445654 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.07■■□□□ 1.12
SHANK2-209ENST00000445654 NCOA3Q9Y6Q9 1424 aa22.06■■□□□ 1.12
SHANK2-209ENST00000445654 ADGRB3O60242 1522 aa22.06■■□□□ 1.12
SHANK2-209ENST00000445654 HDGFP51858 240 aaKnown RBP22.06■■□□□ 1.12
SHANK2-209ENST00000445654 SLC52A1Q9NWF4 448 aa22.05■■□□□ 1.12
SHANK2-209ENST00000445654 COL16A1Q07092 1604 aaPredicted RBP22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms