RNA–Protein interactions for RNA: ENST00000444987.1

LRRC42-204, Transcript of leucine rich repeat containing 42, humanhuman

TSL 5

Gene LRRC42, Length 1,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-204ENST00000444987 ANKRD30AQ9BXX3 1397 aa29.13■■■□□ 2.25
LRRC42-204ENST00000444987 KIF15Q9NS87 1388 aa29.13■■■□□ 2.25
LRRC42-204ENST00000444987 FAM50AQ14320 339 aaKnown RBP29.13■■■□□ 2.25
LRRC42-204ENST00000444987 KDM5DQ9BY66 1539 aa29.13■■■□□ 2.25
LRRC42-204ENST00000444987 ERBINQ96RT1 1412 aa29.12■■■□□ 2.25
LRRC42-204ENST00000444987 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.11■■■□□ 2.25
LRRC42-204ENST00000444987 ADGRL2O95490 1459 aa29.1■■■□□ 2.25
LRRC42-204ENST00000444987 UHRF1BP1Q6BDS2 1440 aa29.1■■■□□ 2.25
LRRC42-204ENST00000444987 NCOA1Q15788 1441 aa29.08■■■□□ 2.25
LRRC42-204ENST00000444987 ZC3H13Q5T200 1668 aaKnown RBP29.08■■■□□ 2.25
LRRC42-204ENST00000444987 RRP7BPQ9NSQ0 103 aa29.06■■■□□ 2.24
LRRC42-204ENST00000444987 WASHC2CQ9Y4E1 1318 aa29.05■■■□□ 2.24
LRRC42-204ENST00000444987 PTPRKQ15262 1439 aa29.03■■■□□ 2.24
LRRC42-204ENST00000444987 MROH1Q8NDA8 1641 aa29.02■■■□□ 2.24
LRRC42-204ENST00000444987 CHIC2Q9UKJ5 165 aa29.02■■■□□ 2.24
LRRC42-204ENST00000444987 PPARGC1BQ86YN6 1023 aaKnown RBP29.01■■■□□ 2.23
LRRC42-204ENST00000444987 PZPP20742 1482 aa29■■■□□ 2.23
LRRC42-204ENST00000444987 DEPDC5O75140 1603 aa29■■■□□ 2.23
LRRC42-204ENST00000444987 PRDM15P57071 1507 aaPredicted RBP28.99■■■□□ 2.23
LRRC42-204ENST00000444987 ABCC3O15438 1527 aa28.99■■■□□ 2.23
LRRC42-204ENST00000444987 ROCK1Q13464 1354 aa28.97■■■□□ 2.23
LRRC42-204ENST00000444987 HSPA2P54652 639 aa28.96■■■□□ 2.23
LRRC42-204ENST00000444987 RRBP1Q9P2E9 1410 aaKnown RBP28.95■■■□□ 2.23
LRRC42-204ENST00000444987 ZNF142P52746 1687 aaPredicted RBP28.94■■■□□ 2.22
LRRC42-204ENST00000444987 MYO3AQ8NEV4 1616 aa28.94■■■□□ 2.22
LRRC42-204ENST00000444987 CEP152O94986 1710 aa28.91■■■□□ 2.22
LRRC42-204ENST00000444987 KANK1Q14678 1352 aa28.9■■■□□ 2.22
LRRC42-204ENST00000444987 ANKRD50Q9ULJ7 1429 aa28.9■■■□□ 2.22
LRRC42-204ENST00000444987 CAMSAP1Q5T5Y3 1602 aa28.9■■■□□ 2.22
LRRC42-204ENST00000444987 VWDEQ8N2E2 1590 aa28.87■■■□□ 2.21
LRRC42-204ENST00000444987 CEP170BQ9Y4F5 1589 aaPredicted RBP28.87■■■□□ 2.21
LRRC42-204ENST00000444987 TNRQ92752 1358 aa28.87■■■□□ 2.21
LRRC42-204ENST00000444987 ARHGAP31Q2M1Z3 1444 aa28.86■■■□□ 2.21
LRRC42-204ENST00000444987 LMTK2Q8IWU2 1503 aa28.85■■■□□ 2.21
LRRC42-204ENST00000444987 SPATA31D1Q6ZQQ2 1576 aa28.84■■■□□ 2.21
LRRC42-204ENST00000444987 A2ML1A8K2U0 1454 aa28.84■■■□□ 2.21
LRRC42-204ENST00000444987 STRCQ7RTU9 1775 aa28.83■■■□□ 2.21
LRRC42-204ENST00000444987 FBXO31Q5XUX0 539 aaPredicted RBP28.83■■■□□ 2.21
LRRC42-204ENST00000444987 DMRT2Q9Y5R5 561 aa28.83■■■□□ 2.21
LRRC42-204ENST00000444987 NLRP1Q9C000 1473 aa28.82■■■□□ 2.2
LRRC42-204ENST00000444987 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.8■■■□□ 2.2
LRRC42-204ENST00000444987 ERVK-7P63135 1459 aa28.79■■■□□ 2.2
LRRC42-204ENST00000444987 PLA2R1Q13018 1463 aa28.79■■■□□ 2.2
LRRC42-204ENST00000444987 UNC13BO14795 1591 aa28.78■■■□□ 2.2
LRRC42-204ENST00000444987 ITGAEP38570 1179 aa28.77■■■□□ 2.2
LRRC42-204ENST00000444987 PTPRTO14522 1441 aa28.74■■■□□ 2.19
LRRC42-204ENST00000444987 EFCAB6Q5THR3 1501 aa28.73■■■□□ 2.19
LRRC42-204ENST00000444987 PKD2Q13563 968 aa28.71■■■□□ 2.19
LRRC42-204ENST00000444987 RPRD2Q5VT52 1461 aaKnown RBP28.7■■■□□ 2.18
LRRC42-204ENST00000444987 TET3O43151 1660 aa28.7■■■□□ 2.18
LRRC42-204ENST00000444987 CFAP65Q6ZU64 1925 aaKnown RBP28.69■■■□□ 2.18
LRRC42-204ENST00000444987 UGGT1Q9NYU2 1555 aa28.69■■■□□ 2.18
LRRC42-204ENST00000444987 THEMISQ8N1K5 641 aaPredicted RBP28.68■■■□□ 2.18
LRRC42-204ENST00000444987 GCC2Q8IWJ2 1684 aa28.67■■■□□ 2.18
LRRC42-204ENST00000444987 IQGAP3Q86VI3 1631 aa28.65■■■□□ 2.18
LRRC42-204ENST00000444987 POLR1AO95602 1720 aaPredicted RBP28.62■■■□□ 2.17
LRRC42-204ENST00000444987 NOS1P29475 1434 aa28.61■■■□□ 2.17
LRRC42-204ENST00000444987 KDM5AP29375 1690 aaKnown RBP28.61■■■□□ 2.17
LRRC42-204ENST00000444987 HFM1A2PYH4 1435 aa28.6■■■□□ 2.17
LRRC42-204ENST00000444987 NAIPQ13075 1403 aa28.6■■■□□ 2.17
LRRC42-204ENST00000444987 UBR1Q8IWV7 1749 aa28.6■■■□□ 2.17
LRRC42-204ENST00000444987 NCKAP5LQ9HCH0 1330 aa28.59■■■□□ 2.17
LRRC42-204ENST00000444987 NUP155O75694 1391 aa28.58■■■□□ 2.17
LRRC42-204ENST00000444987 SYNMO15061 1565 aa28.56■■■□□ 2.16
LRRC42-204ENST00000444987 ANKLE2Q86XL3 938 aa28.55■■■□□ 2.16
LRRC42-204ENST00000444987 SLC52A1Q9NWF4 448 aa28.54■■■□□ 2.16
LRRC42-204ENST00000444987 E9PCH4 1651 aa28.54■■■□□ 2.16
LRRC42-204ENST00000444987 PIK3C2BO00750 1634 aa28.54■■■□□ 2.16
LRRC42-204ENST00000444987 NEURL4Q96JN8 1562 aa28.52■■■□□ 2.16
LRRC42-204ENST00000444987 MED14O60244 1454 aa28.51■■■□□ 2.15
LRRC42-204ENST00000444987 SLIT1O75093 1534 aa28.5■■■□□ 2.15
LRRC42-204ENST00000444987 IDI1Q13907 227 aa28.49■■■□□ 2.15
LRRC42-204ENST00000444987 ARHGAP23Q9P227 1491 aa28.48■■■□□ 2.15
LRRC42-204ENST00000444987 ADGRB3O60242 1522 aa28.45■■■□□ 2.15
LRRC42-204ENST00000444987 STAG3Q9UJ98 1225 aa28.45■■■□□ 2.14
LRRC42-204ENST00000444987 CERKQ8TCT0 537 aa28.44■■■□□ 2.14
LRRC42-204ENST00000444987 NPHP4O75161 1426 aaPredicted RBP28.43■■■□□ 2.14
LRRC42-204ENST00000444987 LTBP4Q8N2S1 1624 aa28.43■■■□□ 2.14
LRRC42-204ENST00000444987 ACIN1Q9UKV3 1341 aaKnown RBP28.43■■■□□ 2.14
LRRC42-204ENST00000444987 IQGAP1P46940 1657 aa28.42■■■□□ 2.14
LRRC42-204ENST00000444987 SCAF11Q99590 1463 aaKnown RBP28.41■■■□□ 2.14
LRRC42-204ENST00000444987 TMEM2Q9UHN6 1383 aa28.41■■■□□ 2.14
LRRC42-204ENST00000444987 EID1Q9Y6B2 187 aa28.4■■■□□ 2.14
LRRC42-204ENST00000444987 FBXO41Q8TF61 875 aa28.39■■■□□ 2.14
LRRC42-204ENST00000444987 IQSEC2Q5JU85 1478 aa28.38■■■□□ 2.13
LRRC42-204ENST00000444987 SPHKAPQ2M3C7 1700 aa28.38■■■□□ 2.13
LRRC42-204ENST00000444987 TXNDC2Q86VQ3 553 aa28.36■■■□□ 2.13
LRRC42-204ENST00000444987 TMEM131LA2VDJ0 1609 aa28.36■■■□□ 2.13
LRRC42-204ENST00000444987 ILDR1Q86SU0 546 aaPredicted RBP28.34■■■□□ 2.13
LRRC42-204ENST00000444987 TRIM52Q96A61 297 aa28.34■■■□□ 2.13
LRRC42-204ENST00000444987 LTKP29376 864 aa28.33■■■□□ 2.13
LRRC42-204ENST00000444987 ZNF335Q9H4Z2 1342 aaPredicted RBP28.33■■■□□ 2.13
LRRC42-204ENST00000444987 MYO5BQ9ULV0 1848 aa28.3■■■□□ 2.12
LRRC42-204ENST00000444987 HDGFP51858 240 aaKnown RBP28.3■■■□□ 2.12
LRRC42-204ENST00000444987 CPS1P31327 1500 aa28.29■■■□□ 2.12
LRRC42-204ENST00000444987 TRPM2O94759 1503 aa28.28■■■□□ 2.12
LRRC42-204ENST00000444987 SETD5Q9C0A6 1442 aa28.27■■■□□ 2.12
LRRC42-204ENST00000444987 ZFYVE9O95405 1425 aa28.26■■■□□ 2.12
LRRC42-204ENST00000444987 SLC4A1APQ9BWU0 796 aaKnown RBP28.26■■■□□ 2.11
LRRC42-204ENST00000444987 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms