RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 CCDC144AA2RUR9 1427 aa15.09■□□□□ 0.01
HCFC1-203ENST00000444191 MAGI3Q5TCQ9 1506 aa15.08■□□□□ 0.01
HCFC1-203ENST00000444191 GZF1Q9H116 711 aaPredicted RBP15.08■□□□□ 0
HCFC1-203ENST00000444191 NFKBIBQ15653 356 aa15.08■□□□□ 0
HCFC1-203ENST00000444191 BRD4O60885 1362 aaPredicted RBP15.08■□□□□ 0
HCFC1-203ENST00000444191 COG6Q9Y2V7 657 aa15.07■□□□□ 0
HCFC1-203ENST00000444191 UGGT2Q9NYU1 1516 aa15.07■□□□□ 0
HCFC1-203ENST00000444191 DHX29Q7Z478 1369 aaKnown RBP15.06■□□□□ 0
HCFC1-203ENST00000444191 NUTM2DQ5VT03 806 aaPredicted RBP15.06■□□□□ 0
HCFC1-203ENST00000444191 BCAR3O75815 825 aa15.05■□□□□ -0
HCFC1-203ENST00000444191 GSE1Q14687 1217 aa15.05■□□□□ -0
HCFC1-203ENST00000444191 ERCC6Q03468 1493 aa15.05■□□□□ -0
HCFC1-203ENST00000444191 FRAT2O75474 233 aaPredicted RBP15.04■□□□□ -0
HCFC1-203ENST00000444191 PLB1Q6P1J6 1458 aa15.03■□□□□ -0
HCFC1-203ENST00000444191 HSP90AA1P07900 732 aaKnown RBP15.03■□□□□ -0
HCFC1-203ENST00000444191 PANK1Q8TE04 598 aa15.03■□□□□ -0
HCFC1-203ENST00000444191 MS4A1P11836 297 aa15.02■□□□□ -0
HCFC1-203ENST00000444191 FAM161AQ3B820 660 aa15.02■□□□□ -0
HCFC1-203ENST00000444191 HECW1Q76N89 1606 aa15.02■□□□□ -0
HCFC1-203ENST00000444191 CARMIL2Q6F5E8 1435 aa15.02■□□□□ -0
HCFC1-203ENST00000444191 CUL7Q14999 1698 aa15.02□□□□□ -0.01
HCFC1-203ENST00000444191 U2SURPO15042 1029 aaKnown RBP15.01□□□□□ -0.01
HCFC1-203ENST00000444191 BECN1Q14457 450 aa15□□□□□ -0.01
HCFC1-203ENST00000444191 CENPQQ7L2Z9 268 aaPredicted RBP15□□□□□ -0.01
HCFC1-203ENST00000444191 CDCA8Q53HL2 280 aa15□□□□□ -0.01
HCFC1-203ENST00000444191 FTSJ3Q8IY81 847 aaKnown RBP15□□□□□ -0.01
HCFC1-203ENST00000444191 ARID4BQ4LE39 1312 aaPredicted RBP14.99□□□□□ -0.01
HCFC1-203ENST00000444191 ROCK1Q13464 1354 aa14.99□□□□□ -0.01
HCFC1-203ENST00000444191 DENND4BO75064 1496 aaPredicted RBP14.99□□□□□ -0.01
HCFC1-203ENST00000444191 PPP2R1AP30153 589 aa14.99□□□□□ -0.01
HCFC1-203ENST00000444191 MORC1Q86VD1 984 aa14.99□□□□□ -0.01
HCFC1-203ENST00000444191 C9orf84Q5VXU9 1444 aa14.98□□□□□ -0.01
HCFC1-203ENST00000444191 IQGAP2Q13576 1575 aa14.98□□□□□ -0.01
HCFC1-203ENST00000444191 CTTNBP2Q8WZ74 1663 aa14.98□□□□□ -0.01
HCFC1-203ENST00000444191 ZNF608Q9ULD9 1512 aaPredicted RBP14.97□□□□□ -0.01
HCFC1-203ENST00000444191 CAMSAP2Q08AD1 1489 aa14.97□□□□□ -0.01
HCFC1-203ENST00000444191 TROQ12816 1431 aaPredicted RBP14.97□□□□□ -0.01
HCFC1-203ENST00000444191 TRAK1Q9UPV9 953 aa14.97□□□□□ -0.01
HCFC1-203ENST00000444191 USP35Q9P2H5 1018 aa14.97□□□□□ -0.01
HCFC1-203ENST00000444191 TEX14Q8IWB6 1497 aa14.96□□□□□ -0.01
HCFC1-203ENST00000444191 KIF3BO15066 747 aa14.96□□□□□ -0.01
HCFC1-203ENST00000444191 KIF21AQ7Z4S6 1674 aa14.96□□□□□ -0.01
HCFC1-203ENST00000444191 SPATA31E1Q6ZUB1 1445 aa14.95□□□□□ -0.02
HCFC1-203ENST00000444191 U2AF1L5P0DN76 240 aaPredicted RBP14.94□□□□□ -0.02
HCFC1-203ENST00000444191 U2AF1Q01081 240 aaKnown RBP eCLIP14.94□□□□□ -0.02
HCFC1-203ENST00000444191 DISP3Q9P2K9 1392 aa14.94□□□□□ -0.02
HCFC1-203ENST00000444191 CENPJQ9HC77 1338 aaPredicted RBP14.94□□□□□ -0.02
HCFC1-203ENST00000444191 ARHGEF11O15085 1522 aa14.94□□□□□ -0.02
HCFC1-203ENST00000444191 KDM5BQ9UGL1 1544 aa14.94□□□□□ -0.02
HCFC1-203ENST00000444191 MFAP1P55081 439 aaKnown RBP14.94□□□□□ -0.02
HCFC1-203ENST00000444191 STK26Q9P289 416 aa14.93□□□□□ -0.02
HCFC1-203ENST00000444191 GGT6Q6P531 493 aa14.92□□□□□ -0.02
HCFC1-203ENST00000444191 AFAP1Q8N556 730 aa14.92□□□□□ -0.02
HCFC1-203ENST00000444191 UBE2Q2Q8WVN8 375 aa14.92□□□□□ -0.02
HCFC1-203ENST00000444191 FOXD4L1Q9NU39 408 aa14.92□□□□□ -0.02
HCFC1-203ENST00000444191 CFAP70Q5T0N1 1121 aa14.92□□□□□ -0.02
HCFC1-203ENST00000444191 PZPP20742 1482 aa14.92□□□□□ -0.02
HCFC1-203ENST00000444191 SLC24A1O60721 1099 aa14.91□□□□□ -0.02
HCFC1-203ENST00000444191 TCOF1Q13428 1488 aaKnown RBP14.91□□□□□ -0.02
HCFC1-203ENST00000444191 LAMC3Q9Y6N6 1575 aa14.91□□□□□ -0.02
HCFC1-203ENST00000444191 RNF123Q5XPI4 1314 aa14.9□□□□□ -0.02
HCFC1-203ENST00000444191 PTPRGP23470 1445 aa14.9□□□□□ -0.02
HCFC1-203ENST00000444191 NUP153P49790 1475 aaKnown RBP14.9□□□□□ -0.02
HCFC1-203ENST00000444191 GPATCH8Q9UKJ3 1502 aaKnown RBP14.89□□□□□ -0.03
HCFC1-203ENST00000444191 PER1O15534 1290 aaPredicted RBP14.89□□□□□ -0.03
HCFC1-203ENST00000444191 DUSP27Q5VZP5 1158 aa14.89□□□□□ -0.03
HCFC1-203ENST00000444191 CFAP53Q96M91 514 aa14.89□□□□□ -0.03
HCFC1-203ENST00000444191 NAP1L5Q96NT1 182 aaPredicted RBP14.89□□□□□ -0.03
HCFC1-203ENST00000444191 ITPRIPQ8IWB1 547 aa14.88□□□□□ -0.03
HCFC1-203ENST00000444191 EFCAB2Q5VUJ9 269 aa14.87□□□□□ -0.03
HCFC1-203ENST00000444191 TMEM132EQ6IEE7 984 aa14.87□□□□□ -0.03
HCFC1-203ENST00000444191 SPINK5Q9NQ38 1064 aaPredicted RBP14.87□□□□□ -0.03
HCFC1-203ENST00000444191 TPRNQ4KMQ1 711 aa14.87□□□□□ -0.03
HCFC1-203ENST00000444191 SPAG9O60271 1321 aaKnown RBP14.86□□□□□ -0.03
HCFC1-203ENST00000444191 ERBINQ96RT1 1412 aa14.86□□□□□ -0.03
HCFC1-203ENST00000444191 E9PSI1 815 aa14.86□□□□□ -0.03
HCFC1-203ENST00000444191 IGHDP01880 384 aa14.85□□□□□ -0.03
HCFC1-203ENST00000444191 POGKQ9P215 609 aa14.85□□□□□ -0.03
HCFC1-203ENST00000444191 KIAA0586Q9BVV6 1533 aa14.84□□□□□ -0.03
HCFC1-203ENST00000444191 ELL2O00472 640 aaPredicted RBP14.84□□□□□ -0.03
HCFC1-203ENST00000444191 TESK2Q96S53 571 aa14.84□□□□□ -0.03
HCFC1-203ENST00000444191 SMC4Q9NTJ3 1288 aa14.84□□□□□ -0.03
HCFC1-203ENST00000444191 SRPK2P78362 688 aaKnown RBP14.84□□□□□ -0.03
HCFC1-203ENST00000444191 SLC12A5Q9H2X9 1139 aa14.84□□□□□ -0.03
HCFC1-203ENST00000444191 STAG3Q9UJ98 1225 aa14.84□□□□□ -0.03
HCFC1-203ENST00000444191 APBB1O00213 710 aa14.83□□□□□ -0.04
HCFC1-203ENST00000444191 NCLP19338 710 aaKnown RBP14.83□□□□□ -0.04
HCFC1-203ENST00000444191 SAMD9Q5K651 1589 aa14.83□□□□□ -0.04
HCFC1-203ENST00000444191 SLFN5Q08AF3 891 aa14.83□□□□□ -0.04
HCFC1-203ENST00000444191 TNNQ9UQP3 1299 aa14.83□□□□□ -0.04
HCFC1-203ENST00000444191 MAPK8IP3Q9UPT6 1336 aa14.83□□□□□ -0.04
HCFC1-203ENST00000444191 LRPPRCP42704 1394 aaKnown RBP14.83□□□□□ -0.04
HCFC1-203ENST00000444191 PLEKHH1Q9ULM0 1364 aa14.83□□□□□ -0.04
HCFC1-203ENST00000444191 RSPH4AQ5TD94 716 aa14.82□□□□□ -0.04
HCFC1-203ENST00000444191 TCP11L2Q8N4U5 519 aa14.82□□□□□ -0.04
HCFC1-203ENST00000444191 DMRT2Q9Y5R5 561 aa14.82□□□□□ -0.04
HCFC1-203ENST00000444191 SEC24BO95487 1268 aa14.81□□□□□ -0.04
HCFC1-203ENST00000444191 WDR62O43379 1518 aa14.81□□□□□ -0.04
HCFC1-203ENST00000444191 TSR2Q969E8 191 aaKnown RBP14.81□□□□□ -0.04
HCFC1-203ENST00000444191 PLPPR3Q6T4P5 718 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms