RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 WASHC2CQ9Y4E1 1318 aa32.56■■■□□ 2.8
CDKN3-204ENST00000442975 PTPRKQ15262 1439 aa32.56■■■□□ 2.8
CDKN3-204ENST00000442975 DUOX2Q9NRD8 1548 aa32.56■■■□□ 2.8
CDKN3-204ENST00000442975 RRP7BPQ9NSQ0 103 aa32.55■■■□□ 2.8
CDKN3-204ENST00000442975 PPARGC1BQ86YN6 1023 aaKnown RBP32.54■■■□□ 2.8
CDKN3-204ENST00000442975 FAM135AQ9P2D6 1515 aa32.54■■■□□ 2.8
CDKN3-204ENST00000442975 CHIC2Q9UKJ5 165 aa32.53■■■□□ 2.8
CDKN3-204ENST00000442975 EIF2AK4Q9P2K8 1649 aaKnown RBP32.51■■■□□ 2.8
CDKN3-204ENST00000442975 RNF17Q9BXT8 1623 aaKnown RBP32.51■■■□□ 2.79
CDKN3-204ENST00000442975 ANKRD30AQ9BXX3 1397 aa32.48■■■□□ 2.79
CDKN3-204ENST00000442975 ERBINQ96RT1 1412 aa32.48■■■□□ 2.79
CDKN3-204ENST00000442975 SETD1BQ9UPS6 1966 aaKnown RBP32.47■■■□□ 2.79
CDKN3-204ENST00000442975 MYO3AQ8NEV4 1616 aa32.46■■■□□ 2.79
CDKN3-204ENST00000442975 PZPP20742 1482 aa32.45■■■□□ 2.79
CDKN3-204ENST00000442975 ABCC3O15438 1527 aa32.44■■■□□ 2.78
CDKN3-204ENST00000442975 MROH1Q8NDA8 1641 aa32.42■■■□□ 2.78
CDKN3-204ENST00000442975 FBXO31Q5XUX0 539 aaPredicted RBP32.42■■■□□ 2.78
CDKN3-204ENST00000442975 TNRQ92752 1358 aa32.41■■■□□ 2.78
CDKN3-204ENST00000442975 NCOA1Q15788 1441 aa32.39■■■□□ 2.78
CDKN3-204ENST00000442975 CEP170BQ9Y4F5 1589 aaPredicted RBP32.39■■■□□ 2.78
CDKN3-204ENST00000442975 ADGRL2O95490 1459 aa32.38■■■□□ 2.77
CDKN3-204ENST00000442975 ZC3H13Q5T200 1668 aaKnown RBP32.37■■■□□ 2.77
CDKN3-204ENST00000442975 PRDM15P57071 1507 aaPredicted RBP32.36■■■□□ 2.77
CDKN3-204ENST00000442975 ZNF142P52746 1687 aaPredicted RBP32.35■■■□□ 2.77
CDKN3-204ENST00000442975 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.35■■■□□ 2.77
CDKN3-204ENST00000442975 CAMSAP1Q5T5Y3 1602 aa32.35■■■□□ 2.77
CDKN3-204ENST00000442975 DMRT2Q9Y5R5 561 aa32.33■■■□□ 2.77
CDKN3-204ENST00000442975 STRCQ7RTU9 1775 aa32.32■■■□□ 2.77
CDKN3-204ENST00000442975 A2ML1A8K2U0 1454 aa32.31■■■□□ 2.76
CDKN3-204ENST00000442975 KANK1Q14678 1352 aa32.29■■■□□ 2.76
CDKN3-204ENST00000442975 CEP152O94986 1710 aa32.29■■■□□ 2.76
CDKN3-204ENST00000442975 ILDR1Q86SU0 546 aaPredicted RBP32.28■■■□□ 2.76
CDKN3-204ENST00000442975 ITGAEP38570 1179 aa32.27■■■□□ 2.76
CDKN3-204ENST00000442975 DEPDC5O75140 1603 aa32.26■■■□□ 2.76
CDKN3-204ENST00000442975 ANKRD50Q9ULJ7 1429 aa32.26■■■□□ 2.75
CDKN3-204ENST00000442975 ERVK-7P63135 1459 aa32.25■■■□□ 2.75
CDKN3-204ENST00000442975 NCKAP5LQ9HCH0 1330 aa32.25■■■□□ 2.75
CDKN3-204ENST00000442975 PLA2R1Q13018 1463 aa32.24■■■□□ 2.75
CDKN3-204ENST00000442975 PTPRTO14522 1441 aa32.24■■■□□ 2.75
CDKN3-204ENST00000442975 NLRP1Q9C000 1473 aa32.23■■■□□ 2.75
CDKN3-204ENST00000442975 SPATA31D1Q6ZQQ2 1576 aa32.22■■■□□ 2.75
CDKN3-204ENST00000442975 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.19■■■□□ 2.74
CDKN3-204ENST00000442975 ROCK1Q13464 1354 aa32.18■■■□□ 2.74
CDKN3-204ENST00000442975 ARHGAP31Q2M1Z3 1444 aa32.17■■■□□ 2.74
CDKN3-204ENST00000442975 PKD2Q13563 968 aa32.16■■■□□ 2.74
CDKN3-204ENST00000442975 UGGT1Q9NYU2 1555 aa32.15■■■□□ 2.74
CDKN3-204ENST00000442975 LMTK2Q8IWU2 1503 aa32.14■■■□□ 2.74
CDKN3-204ENST00000442975 VWDEQ8N2E2 1590 aa32.14■■■□□ 2.74
CDKN3-204ENST00000442975 RRBP1Q9P2E9 1410 aaKnown RBP32.13■■■□□ 2.73
CDKN3-204ENST00000442975 CERKQ8TCT0 537 aa32.11■■■□□ 2.73
CDKN3-204ENST00000442975 THEMISQ8N1K5 641 aaPredicted RBP32.1■■■□□ 2.73
CDKN3-204ENST00000442975 FBXO41Q8TF61 875 aa32.09■■■□□ 2.73
CDKN3-204ENST00000442975 EFCAB6Q5THR3 1501 aa32.09■■■□□ 2.73
CDKN3-204ENST00000442975 ANKLE2Q86XL3 938 aa32.02■■■□□ 2.72
CDKN3-204ENST00000442975 UNC13BO14795 1591 aa32.02■■■□□ 2.72
CDKN3-204ENST00000442975 NEURL4Q96JN8 1562 aa32■■■□□ 2.71
CDKN3-204ENST00000442975 ZNF335Q9H4Z2 1342 aaPredicted RBP31.99■■■□□ 2.71
CDKN3-204ENST00000442975 POLR1AO95602 1720 aaPredicted RBP31.98■■■□□ 2.71
CDKN3-204ENST00000442975 CFAP65Q6ZU64 1925 aaKnown RBP31.96■■■□□ 2.71
CDKN3-204ENST00000442975 LTBP4Q8N2S1 1624 aa31.96■■■□□ 2.71
CDKN3-204ENST00000442975 STAG3Q9UJ98 1225 aa31.95■■■□□ 2.71
CDKN3-204ENST00000442975 SYNMO15061 1565 aa31.94■■■□□ 2.7
CDKN3-204ENST00000442975 NOS1P29475 1434 aa31.94■■■□□ 2.7
CDKN3-204ENST00000442975 RPRD2Q5VT52 1461 aaKnown RBP31.94■■■□□ 2.7
CDKN3-204ENST00000442975 TET3O43151 1660 aa31.94■■■□□ 2.7
CDKN3-204ENST00000442975 UBR1Q8IWV7 1749 aa31.94■■■□□ 2.7
CDKN3-204ENST00000442975 NPHP4O75161 1426 aaPredicted RBP31.93■■■□□ 2.7
CDKN3-204ENST00000442975 NUP155O75694 1391 aa31.93■■■□□ 2.7
CDKN3-204ENST00000442975 PIK3C2BO00750 1634 aa31.92■■■□□ 2.7
CDKN3-204ENST00000442975 IDI1Q13907 227 aa31.89■■■□□ 2.7
CDKN3-204ENST00000442975 MED14O60244 1454 aa31.88■■■□□ 2.69
CDKN3-204ENST00000442975 IQGAP3Q86VI3 1631 aa31.88■■■□□ 2.69
CDKN3-204ENST00000442975 SCAF11Q99590 1463 aaKnown RBP31.87■■■□□ 2.69
CDKN3-204ENST00000442975 GCC2Q8IWJ2 1684 aa31.85■■■□□ 2.69
CDKN3-204ENST00000442975 SLIT1O75093 1534 aa31.85■■■□□ 2.69
CDKN3-204ENST00000442975 ARHGAP23Q9P227 1491 aa31.84■■■□□ 2.69
CDKN3-204ENST00000442975 NAIPQ13075 1403 aa31.84■■■□□ 2.69
CDKN3-204ENST00000442975 ADGRB3O60242 1522 aa31.84■■■□□ 2.69
CDKN3-204ENST00000442975 SLC52A1Q9NWF4 448 aa31.83■■■□□ 2.69
CDKN3-204ENST00000442975 IQGAP1P46940 1657 aa31.83■■■□□ 2.69
CDKN3-204ENST00000442975 TMEM2Q9UHN6 1383 aa31.82■■■□□ 2.69
CDKN3-204ENST00000442975 TXNDC2Q86VQ3 553 aa31.82■■■□□ 2.68
CDKN3-204ENST00000442975 EID1Q9Y6B2 187 aa31.82■■■□□ 2.68
CDKN3-204ENST00000442975 LTKP29376 864 aa31.8■■■□□ 2.68
CDKN3-204ENST00000442975 HFM1A2PYH4 1435 aa31.79■■■□□ 2.68
CDKN3-204ENST00000442975 IQSEC2Q5JU85 1478 aa31.78■■■□□ 2.68
CDKN3-204ENST00000442975 E9PCH4 1651 aa31.78■■■□□ 2.68
CDKN3-204ENST00000442975 KDM5AP29375 1690 aaKnown RBP31.75■■■□□ 2.67
CDKN3-204ENST00000442975 CPS1P31327 1500 aa31.73■■■□□ 2.67
CDKN3-204ENST00000442975 CHGAP10645 457 aaKnown RBP31.72■■■□□ 2.67
CDKN3-204ENST00000442975 TRIM52Q96A61 297 aa31.68■■■□□ 2.66
CDKN3-204ENST00000442975 UBAP1LF5GYI3 381 aa31.64■■■□□ 2.66
CDKN3-204ENST00000442975 PPP1R15AO75807 674 aaPredicted RBP31.63■■■□□ 2.65
CDKN3-204ENST00000442975 RIMS2Q9UQ26 1411 aa31.63■■■□□ 2.65
CDKN3-204ENST00000442975 TMEM131LA2VDJ0 1609 aa31.63■■■□□ 2.65
CDKN3-204ENST00000442975 BCANQ96GW7 911 aa31.62■■■□□ 2.65
CDKN3-204ENST00000442975 SENP3Q9H4L4 574 aaPredicted RBP31.62■■■□□ 2.65
CDKN3-204ENST00000442975 ZFYVE9O95405 1425 aa31.6■■■□□ 2.65
CDKN3-204ENST00000442975 SLC26A8Q96RN1 970 aa31.58■■■□□ 2.65
CDKN3-204ENST00000442975 SPHKAPQ2M3C7 1700 aa31.56■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms