RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 ITSN2Q9NZM3 1697 aa18.87■□□□□ 0.61
MCF2L-218ENST00000442625 IL27Q8NEV9 243 aa18.87■□□□□ 0.61
MCF2L-218ENST00000442625 ARXQ96QS3 562 aa18.87■□□□□ 0.61
MCF2L-218ENST00000442625 HNRNPMP52272 730 aaKnown RBP eCLIP18.86■□□□□ 0.613e-7■■■■□ 22.6
MCF2L-218ENST00000442625 PLEKHD1A6NEE1 506 aa18.86■□□□□ 0.61
MCF2L-218ENST00000442625 JPH4Q96JJ6 628 aa18.86■□□□□ 0.61
MCF2L-218ENST00000442625 RALGAPBQ86X10 1494 aa18.85■□□□□ 0.61
MCF2L-218ENST00000442625 C9orf84Q5VXU9 1444 aa18.85■□□□□ 0.61
MCF2L-218ENST00000442625 ARID4BQ4LE39 1312 aaPredicted RBP18.85■□□□□ 0.61
MCF2L-218ENST00000442625 RRP1P56182 461 aaKnown RBP18.85■□□□□ 0.61
MCF2L-218ENST00000442625 CEP170Q5SW79 1584 aa18.84■□□□□ 0.61
MCF2L-218ENST00000442625 CROCC2H7BZ55 1655 aa18.84■□□□□ 0.61
MCF2L-218ENST00000442625 PLIN1O60240 522 aa18.84■□□□□ 0.61
MCF2L-218ENST00000442625 KIF15Q9NS87 1388 aa18.83■□□□□ 0.61
MCF2L-218ENST00000442625 TSPY4P0CV99 314 aa18.83■□□□□ 0.61
MCF2L-218ENST00000442625 TSPY10P0CW01 314 aa18.83■□□□□ 0.61
MCF2L-218ENST00000442625 UHRF1BP1Q6BDS2 1440 aa18.83■□□□□ 0.6
MCF2L-218ENST00000442625 CDCA7LQ96GN5 454 aa18.83■□□□□ 0.6
MCF2L-218ENST00000442625 ROCK2O75116 1388 aaKnown RBP18.83■□□□□ 0.6
MCF2L-218ENST00000442625 RCAN3Q9UKA8 241 aa18.81■□□□□ 0.6
MCF2L-218ENST00000442625 PDE4AP27815 886 aa18.8■□□□□ 0.6
MCF2L-218ENST00000442625 MYBBP1AQ9BQG0 1328 aaKnown RBP18.8■□□□□ 0.6
MCF2L-218ENST00000442625 RGL3Q3MIN7 710 aa18.8■□□□□ 0.6
MCF2L-218ENST00000442625 CARMIL2Q6F5E8 1435 aa18.79■□□□□ 0.6
MCF2L-218ENST00000442625 ADCY10Q96PN6 1610 aa18.79■□□□□ 0.6
MCF2L-218ENST00000442625 NEFMP07197 916 aa18.79■□□□□ 0.6
MCF2L-218ENST00000442625 LRPPRCP42704 1394 aaKnown RBP18.77■□□□□ 0.6
MCF2L-218ENST00000442625 SYNJ2O15056 1496 aa18.76■□□□□ 0.59
MCF2L-218ENST00000442625 MAGI1Q96QZ7 1491 aaPredicted RBP18.76■□□□□ 0.59
MCF2L-218ENST00000442625 CDC42BPAQ5VT25 1732 aa18.76■□□□□ 0.59
MCF2L-218ENST00000442625 ATP10BO94823 1461 aa18.76■□□□□ 0.59
MCF2L-218ENST00000442625 RALBP1Q15311 655 aa18.76■□□□□ 0.59
MCF2L-218ENST00000442625 NBPF1Q3BBV0 1214 aa18.76■□□□□ 0.59
MCF2L-218ENST00000442625 BRD4O60885 1362 aaPredicted RBP18.76■□□□□ 0.59
MCF2L-218ENST00000442625 ABCC10Q5T3U5 1492 aa18.75■□□□□ 0.59
MCF2L-218ENST00000442625 ARHGEF12Q9NZN5 1544 aa18.74■□□□□ 0.59
MCF2L-218ENST00000442625 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.73■□□□□ 0.594e-9■□□□□ 9.3
MCF2L-218ENST00000442625 BACH2Q9BYV9 841 aa18.73■□□□□ 0.59
MCF2L-218ENST00000442625 ERCC6Q03468 1493 aa18.72■□□□□ 0.59
MCF2L-218ENST00000442625 TCERG1O14776 1098 aaKnown RBP18.72■□□□□ 0.59
MCF2L-218ENST00000442625 SLC4A3P48751 1232 aa18.72■□□□□ 0.59
MCF2L-218ENST00000442625 SHANK2Q9UPX8 1470 aa18.72■□□□□ 0.59
MCF2L-218ENST00000442625 CC2D1BQ5T0F9 858 aaKnown RBP18.72■□□□□ 0.59
MCF2L-218ENST00000442625 NLRP13Q86W25 1043 aa18.7■□□□□ 0.58
MCF2L-218ENST00000442625 PDIA4P13667 645 aaKnown RBP18.69■□□□□ 0.58
MCF2L-218ENST00000442625 CRBNQ96SW2 442 aa18.69■□□□□ 0.58
MCF2L-218ENST00000442625 KTN1Q86UP2 1357 aaKnown RBP18.69■□□□□ 0.58
MCF2L-218ENST00000442625 PTPRGP23470 1445 aa18.68■□□□□ 0.58
MCF2L-218ENST00000442625 NUP160Q12769 1436 aa18.68■□□□□ 0.58
MCF2L-218ENST00000442625 ABCA8O94911 1581 aa18.68■□□□□ 0.58
MCF2L-218ENST00000442625 KDM5DQ9BY66 1539 aa18.68■□□□□ 0.58
MCF2L-218ENST00000442625 C20orf194Q5TEA3 1177 aa18.67■□□□□ 0.58
MCF2L-218ENST00000442625 CCDC144AA2RUR9 1427 aa18.67■□□□□ 0.58
MCF2L-218ENST00000442625 FAM135AQ9P2D6 1515 aa18.66■□□□□ 0.58
MCF2L-218ENST00000442625 PARD3Q8TEW0 1356 aa18.66■□□□□ 0.58
MCF2L-218ENST00000442625 PER1O15534 1290 aaPredicted RBP18.65■□□□□ 0.58
MCF2L-218ENST00000442625 PRAG1Q86YV5 1406 aa18.65■□□□□ 0.58
MCF2L-218ENST00000442625 DISP3Q9P2K9 1392 aa18.64■□□□□ 0.57
MCF2L-218ENST00000442625 PDE4CQ08493 712 aa18.64■□□□□ 0.57
MCF2L-218ENST00000442625 E9PCH4 1651 aa18.63■□□□□ 0.57
MCF2L-218ENST00000442625 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.63■□□□□ 0.57
MCF2L-218ENST00000442625 PANK3Q9H999 370 aa18.62■□□□□ 0.57
MCF2L-218ENST00000442625 CCDC141Q6ZP82 1450 aa18.61■□□□□ 0.57
MCF2L-218ENST00000442625 PLPPR3Q6T4P5 718 aa18.6■□□□□ 0.57
MCF2L-218ENST00000442625 TESK2Q96S53 571 aa18.6■□□□□ 0.57
MCF2L-218ENST00000442625 SAMD9LQ8IVG5 1584 aa18.6■□□□□ 0.57
MCF2L-218ENST00000442625 PLA2R1Q13018 1463 aa18.6■□□□□ 0.57
MCF2L-218ENST00000442625 BRPF3Q9ULD4 1205 aa18.59■□□□□ 0.57
MCF2L-218ENST00000442625 TRPM1Q7Z4N2 1603 aa18.59■□□□□ 0.57
MCF2L-218ENST00000442625 A2MP01023 1474 aa18.58■□□□□ 0.57
MCF2L-218ENST00000442625 ARHGEF5Q12774 1597 aa18.58■□□□□ 0.56
MCF2L-218ENST00000442625 MS4A1P11836 297 aa18.58■□□□□ 0.56
MCF2L-218ENST00000442625 PDE3BQ13370 1112 aa18.58■□□□□ 0.56
MCF2L-218ENST00000442625 SYCP2Q9BX26 1530 aa18.56■□□□□ 0.56
MCF2L-218ENST00000442625 COL17A1Q9UMD9 1497 aaPredicted RBP18.55■□□□□ 0.56
MCF2L-218ENST00000442625 PHF23Q9BUL5 403 aaPredicted RBP18.54■□□□□ 0.56
MCF2L-218ENST00000442625 CDC42BPBQ9Y5S2 1711 aa18.54■□□□□ 0.56
MCF2L-218ENST00000442625 ERBINQ96RT1 1412 aa18.53■□□□□ 0.56
MCF2L-218ENST00000442625 PLEKHH2Q8IVE3 1493 aa18.53■□□□□ 0.56
MCF2L-218ENST00000442625 PPM1GO15355 546 aaPredicted RBP18.53■□□□□ 0.56
MCF2L-218ENST00000442625 GPRASP1Q5JY77 1395 aa18.53■□□□□ 0.56
MCF2L-218ENST00000442625 ADAMTS8Q9UP79 889 aa18.52■□□□□ 0.56
MCF2L-218ENST00000442625 TMF1P82094 1093 aa18.52■□□□□ 0.56
MCF2L-218ENST00000442625 NFKBIBQ15653 356 aa18.52■□□□□ 0.56
MCF2L-218ENST00000442625 ARHGAP5Q13017 1502 aa18.51■□□□□ 0.55
MCF2L-218ENST00000442625 RSPH4AQ5TD94 716 aa18.51■□□□□ 0.55
MCF2L-218ENST00000442625 USP35Q9P2H5 1018 aa18.51■□□□□ 0.55
MCF2L-218ENST00000442625 RGS3P49796 1198 aa18.5■□□□□ 0.55
MCF2L-218ENST00000442625 PREX2Q70Z35 1606 aa18.49■□□□□ 0.55
MCF2L-218ENST00000442625 BLMP54132 1417 aaPredicted RBP18.49■□□□□ 0.55
MCF2L-218ENST00000442625 WASHC2CQ9Y4E1 1318 aa18.49■□□□□ 0.55
MCF2L-218ENST00000442625 PRDM15P57071 1507 aaPredicted RBP18.48■□□□□ 0.55
MCF2L-218ENST00000442625 TTC37Q6PGP7 1564 aa18.47■□□□□ 0.55
MCF2L-218ENST00000442625 FRAT1Q92837 279 aaPredicted RBP18.47■□□□□ 0.55
MCF2L-218ENST00000442625 GSE1Q14687 1217 aa18.46■□□□□ 0.55
MCF2L-218ENST00000442625 DDRGK1Q96HY6 314 aa18.45■□□□□ 0.54
MCF2L-218ENST00000442625 KDM2BQ8NHM5 1336 aa18.45■□□□□ 0.54
MCF2L-218ENST00000442625 PLEKHH1Q9ULM0 1364 aa18.44■□□□□ 0.54
MCF2L-218ENST00000442625 UNC13BO14795 1591 aa18.44■□□□□ 0.54
MCF2L-218ENST00000442625 KNSTRNQ9Y448 316 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms