RNA–Protein interactions for RNA: ENST00000440919.1

SATB2-204, Transcript of SATB homeobox 2, humanhuman

TSL 1 (best)

Gene SATB2, Length 2,166 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2-204ENST00000440919 CNGB1Q14028 1251 aaPredicted RBP23.92■■□□□ 1.42
SATB2-204ENST00000440919 NUDCQ9Y266 331 aa23.92■■□□□ 1.42
SATB2-204ENST00000440919 TTC37Q6PGP7 1564 aa23.92■■□□□ 1.42
SATB2-204ENST00000440919 E9PCH4 1651 aa23.9■■□□□ 1.42
SATB2-204ENST00000440919 RNF123Q5XPI4 1314 aa23.9■■□□□ 1.42
SATB2-204ENST00000440919 PNISRQ8TF01 805 aaKnown RBP23.9■■□□□ 1.42
SATB2-204ENST00000440919 SAMD9LQ8IVG5 1584 aa23.9■■□□□ 1.42
SATB2-204ENST00000440919 HNRNPMP52272 730 aaKnown RBP eCLIP23.89■■□□□ 1.42
SATB2-204ENST00000440919 RSPH4AQ5TD94 716 aa23.89■■□□□ 1.42
SATB2-204ENST00000440919 CCDC141Q6ZP82 1450 aa23.88■■□□□ 1.41
SATB2-204ENST00000440919 MYO5CQ9NQX4 1742 aa23.88■■□□□ 1.41
SATB2-204ENST00000440919 ARHGAP5Q13017 1502 aa23.87■■□□□ 1.41
SATB2-204ENST00000440919 FAM135AQ9P2D6 1515 aa23.87■■□□□ 1.41
SATB2-204ENST00000440919 ST20-MTHFSA0A0A6YYL1 179 aa23.87■■□□□ 1.41
SATB2-204ENST00000440919 DCAF11Q8TEB1 546 aa23.85■■□□□ 1.41
SATB2-204ENST00000440919 KDM2AQ9Y2K7 1162 aa23.85■■□□□ 1.41
SATB2-204ENST00000440919 KTN1Q86UP2 1357 aaKnown RBP23.84■■□□□ 1.41
SATB2-204ENST00000440919 TMC1Q8TDI8 760 aa23.84■■□□□ 1.41
SATB2-204ENST00000440919 LRPPRCP42704 1394 aaKnown RBP23.84■■□□□ 1.41
SATB2-204ENST00000440919 TRPM1Q7Z4N2 1603 aa23.83■■□□□ 1.4
SATB2-204ENST00000440919 PLEKHH2Q8IVE3 1493 aa23.82■■□□□ 1.4
SATB2-204ENST00000440919 BRD4O60885 1362 aaPredicted RBP23.81■■□□□ 1.4
SATB2-204ENST00000440919 PLCH2O75038 1416 aa23.8■■□□□ 1.4
SATB2-204ENST00000440919 MYBBP1AQ9BQG0 1328 aaKnown RBP23.8■■□□□ 1.4
SATB2-204ENST00000440919 PRAG1Q86YV5 1406 aa23.79■■□□□ 1.4
SATB2-204ENST00000440919 SYCP2Q9BX26 1530 aa23.78■■□□□ 1.4
SATB2-204ENST00000440919 UNC13BO14795 1591 aa23.78■■□□□ 1.4
SATB2-204ENST00000440919 RALBP1Q15311 655 aa23.78■■□□□ 1.4
SATB2-204ENST00000440919 MAST1Q9Y2H9 1570 aa23.77■■□□□ 1.4
SATB2-204ENST00000440919 CCDC144AA2RUR9 1427 aa23.77■■□□□ 1.39
SATB2-204ENST00000440919 EFCAB2Q5VUJ9 269 aa23.75■■□□□ 1.39
SATB2-204ENST00000440919 WDR7Q9Y4E6 1490 aa23.75■■□□□ 1.39
SATB2-204ENST00000440919 ERICH6Q7L0X2 663 aa23.73■■□□□ 1.39
SATB2-204ENST00000440919 PLA2R1Q13018 1463 aa23.72■■□□□ 1.39
SATB2-204ENST00000440919 SENP3-EIF4A1A0A087X0R7 540 aa23.72■■□□□ 1.39
SATB2-204ENST00000440919 LAMC1P11047 1609 aa23.72■■□□□ 1.39
SATB2-204ENST00000440919 GPRASP1Q5JY77 1395 aa23.72■■□□□ 1.39
SATB2-204ENST00000440919 CCDC136Q96JN2 1154 aa23.7■■□□□ 1.38
SATB2-204ENST00000440919 PARD3Q8TEW0 1356 aa23.7■■□□□ 1.38
SATB2-204ENST00000440919 A2MP01023 1474 aa23.7■■□□□ 1.38
SATB2-204ENST00000440919 PLXNC1O60486 1568 aa23.7■■□□□ 1.38
SATB2-204ENST00000440919 ARAP3Q8WWN8 1544 aa23.7■■□□□ 1.38
SATB2-204ENST00000440919 IQGAP3Q86VI3 1631 aa23.7■■□□□ 1.38
SATB2-204ENST00000440919 PRDM15P57071 1507 aaPredicted RBP23.68■■□□□ 1.38
SATB2-204ENST00000440919 COL17A1Q9UMD9 1497 aaPredicted RBP23.66■■□□□ 1.38
SATB2-204ENST00000440919 NBPF1Q3BBV0 1214 aa23.66■■□□□ 1.38
SATB2-204ENST00000440919 NLRP13Q86W25 1043 aa23.66■■□□□ 1.38
SATB2-204ENST00000440919 NPM1P06748 294 aaKnown RBP eCLIP23.65■■□□□ 1.38
SATB2-204ENST00000440919 ABCC1P33527 1531 aa23.65■■□□□ 1.38
SATB2-204ENST00000440919 ASXL2Q76L83 1435 aa23.64■■□□□ 1.38
SATB2-204ENST00000440919 EIF2AK4Q9P2K8 1649 aaKnown RBP23.64■■□□□ 1.37
SATB2-204ENST00000440919 PER1O15534 1290 aaPredicted RBP23.64■■□□□ 1.37
SATB2-204ENST00000440919 RGL3Q3MIN7 710 aa23.64■■□□□ 1.37
SATB2-204ENST00000440919 ABCA9Q8IUA7 1624 aa23.63■■□□□ 1.37
SATB2-204ENST00000440919 ATP10AO60312 1499 aa23.61■■□□□ 1.37
SATB2-204ENST00000440919 MAGI2Q86UL8 1455 aa23.61■■□□□ 1.37
SATB2-204ENST00000440919 TESK2Q96S53 571 aa23.6■■□□□ 1.37
SATB2-204ENST00000440919 DUOX2Q9NRD8 1548 aa23.6■■□□□ 1.37
SATB2-204ENST00000440919 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.59■■□□□ 1.37
SATB2-204ENST00000440919 DISP3Q9P2K9 1392 aa23.59■■□□□ 1.37
SATB2-204ENST00000440919 RRP1P56182 461 aaKnown RBP23.59■■□□□ 1.37
SATB2-204ENST00000440919 WASHC2CQ9Y4E1 1318 aa23.57■■□□□ 1.36
SATB2-204ENST00000440919 TRAPPC8Q9Y2L5 1435 aa23.57■■□□□ 1.36
SATB2-204ENST00000440919 ERBINQ96RT1 1412 aa23.56■■□□□ 1.36
SATB2-204ENST00000440919 PDE3BQ13370 1112 aa23.56■■□□□ 1.36
SATB2-204ENST00000440919 RNF17Q9BXT8 1623 aaKnown RBP23.56■■□□□ 1.36
SATB2-204ENST00000440919 FANCAO15360 1455 aa23.56■■□□□ 1.36
SATB2-204ENST00000440919 ZMYM4Q5VZL5 1548 aa23.54■■□□□ 1.36
SATB2-204ENST00000440919 RCAN3Q9UKA8 241 aa23.54■■□□□ 1.36
SATB2-204ENST00000440919 INSRP06213 1382 aa23.54■■□□□ 1.36
SATB2-204ENST00000440919 NOP58Q9Y2X3 529 aaKnown RBP23.52■■□□□ 1.36
SATB2-204ENST00000440919 RTEL1-TNFRSF6BF6WH68 1400 aa23.52■■□□□ 1.36
SATB2-204ENST00000440919 BCL11AQ9H165 835 aa23.52■■□□□ 1.36
SATB2-204ENST00000440919 SPAG9O60271 1321 aaKnown RBP23.52■■□□□ 1.36
SATB2-204ENST00000440919 BLMP54132 1417 aaPredicted RBP23.51■■□□□ 1.35
SATB2-204ENST00000440919 SALL2Q9Y467 1007 aaPredicted RBP23.5■■□□□ 1.35
SATB2-204ENST00000440919 CC2D1BQ5T0F9 858 aaKnown RBP23.49■■□□□ 1.35
SATB2-204ENST00000440919 AFAP1Q8N556 730 aa23.49■■□□□ 1.35
SATB2-204ENST00000440919 EXOC6Q8TAG9 804 aa23.49■■□□□ 1.35
SATB2-204ENST00000440919 PANK3Q9H999 370 aa23.49■■□□□ 1.35
SATB2-204ENST00000440919 TMF1P82094 1093 aa23.48■■□□□ 1.35
SATB2-204ENST00000440919 ADGRL1O94910 1474 aa23.47■■□□□ 1.35
SATB2-204ENST00000440919 MYT1LQ9UL68 1186 aa23.46■■□□□ 1.35
SATB2-204ENST00000440919 ZFYVE16Q7Z3T8 1539 aa23.46■■□□□ 1.35
SATB2-204ENST00000440919 PAK3O75914 559 aaPredicted RBP23.45■■□□□ 1.35
SATB2-204ENST00000440919 CDCA7LQ96GN5 454 aa23.45■■□□□ 1.34
SATB2-204ENST00000440919 SCAPERQ9BY12 1400 aa23.45■■□□□ 1.34
SATB2-204ENST00000440919 MADDQ8WXG6 1647 aa23.44■■□□□ 1.34
SATB2-204ENST00000440919 ANP32AP39687 249 aaKnown RBP23.44■■□□□ 1.34
SATB2-204ENST00000440919 IQGAP1P46940 1657 aa23.43■■□□□ 1.34
SATB2-204ENST00000440919 IPO9Q96P70 1041 aaKnown RBP23.42■■□□□ 1.34
SATB2-204ENST00000440919 CD109Q6YHK3 1445 aa23.4■■□□□ 1.34
SATB2-204ENST00000440919 ATP7AQ04656 1500 aa23.4■■□□□ 1.34
SATB2-204ENST00000440919 INO80Q9ULG1 1556 aaPredicted RBP23.4■■□□□ 1.34
SATB2-204ENST00000440919 SPHKAPQ2M3C7 1700 aa23.39■■□□□ 1.33
SATB2-204ENST00000440919 CFAP74Q9C0B2 1584 aa23.39■■□□□ 1.33
SATB2-204ENST00000440919 TRPM2O94759 1503 aa23.38■■□□□ 1.33
SATB2-204ENST00000440919 CEP152O94986 1710 aa23.38■■□□□ 1.33
SATB2-204ENST00000440919 TCERG1O14776 1098 aaKnown RBP23.37■■□□□ 1.33
SATB2-204ENST00000440919 SYNMO15061 1565 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms