RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 KIF3BO15066 747 aa24.58■■□□□ 1.53
SNRPB-202ENST00000438552 PTPRMP28827 1452 aa24.58■■□□□ 1.52
SNRPB-202ENST00000438552 DEPDC5O75140 1603 aa24.57■■□□□ 1.52
SNRPB-202ENST00000438552 GCC2Q8IWJ2 1684 aa24.57■■□□□ 1.52
SNRPB-202ENST00000438552 MROH2AA6NES4 1674 aa24.56■■□□□ 1.52
SNRPB-202ENST00000438552 GGT6Q6P531 493 aa24.55■■□□□ 1.52
SNRPB-202ENST00000438552 C3P01024 1663 aa24.54■■□□□ 1.52
SNRPB-202ENST00000438552 PRDM15P57071 1507 aaPredicted RBP24.54■■□□□ 1.52
SNRPB-202ENST00000438552 CEP152O94986 1710 aa24.53■■□□□ 1.52
SNRPB-202ENST00000438552 KDM5DQ9BY66 1539 aa24.53■■□□□ 1.52
SNRPB-202ENST00000438552 ANKRD50Q9ULJ7 1429 aa24.52■■□□□ 1.52
SNRPB-202ENST00000438552 ZC3H13Q5T200 1668 aaKnown RBP24.52■■□□□ 1.52
SNRPB-202ENST00000438552 FAM135AQ9P2D6 1515 aa24.51■■□□□ 1.51
SNRPB-202ENST00000438552 CNTLNQ9NXG0 1405 aa24.5■■□□□ 1.51
SNRPB-202ENST00000438552 UNC13BO14795 1591 aa24.47■■□□□ 1.51
SNRPB-202ENST00000438552 ABCC3O15438 1527 aa24.47■■□□□ 1.51
SNRPB-202ENST00000438552 ESF1Q9H501 851 aaKnown RBP24.47■■□□□ 1.51
SNRPB-202ENST00000438552 NAIPQ13075 1403 aa24.45■■□□□ 1.51
SNRPB-202ENST00000438552 PLPPR3Q6T4P5 718 aa24.45■■□□□ 1.5
SNRPB-202ENST00000438552 CAMSAP1Q5T5Y3 1602 aa24.45■■□□□ 1.5
SNRPB-202ENST00000438552 HFM1A2PYH4 1435 aa24.44■■□□□ 1.5
SNRPB-202ENST00000438552 VWDEQ8N2E2 1590 aa24.43■■□□□ 1.5
SNRPB-202ENST00000438552 PPP6R1Q9UPN7 881 aa24.42■■□□□ 1.5
SNRPB-202ENST00000438552 CEBPAP49715 358 aaPredicted RBP24.4■■□□□ 1.5
SNRPB-202ENST00000438552 WASHC2CQ9Y4E1 1318 aa24.39■■□□□ 1.5
SNRPB-202ENST00000438552 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.39■■□□□ 1.49
SNRPB-202ENST00000438552 ZMYM3Q14202 1370 aa24.38■■□□□ 1.49
SNRPB-202ENST00000438552 KANK1Q14678 1352 aa24.37■■□□□ 1.49
SNRPB-202ENST00000438552 IQGAP3Q86VI3 1631 aa24.36■■□□□ 1.49
SNRPB-202ENST00000438552 LMTK2Q8IWU2 1503 aa24.35■■□□□ 1.49
SNRPB-202ENST00000438552 PREX1Q8TCU6 1659 aa24.35■■□□□ 1.49
SNRPB-202ENST00000438552 PZPP20742 1482 aa24.35■■□□□ 1.49
SNRPB-202ENST00000438552 EFCAB6Q5THR3 1501 aa24.34■■□□□ 1.49
SNRPB-202ENST00000438552 TET3O43151 1660 aa24.34■■□□□ 1.49
SNRPB-202ENST00000438552 CFAP65Q6ZU64 1925 aaKnown RBP24.31■■□□□ 1.48
SNRPB-202ENST00000438552 MYO3AQ8NEV4 1616 aa24.31■■□□□ 1.48
SNRPB-202ENST00000438552 NPATQ14207 1427 aa24.3■■□□□ 1.48
SNRPB-202ENST00000438552 SPATA31D1Q6ZQQ2 1576 aa24.26■■□□□ 1.47
SNRPB-202ENST00000438552 SETD1BQ9UPS6 1966 aaKnown RBP24.26■■□□□ 1.47
SNRPB-202ENST00000438552 E9PCH4 1651 aa24.26■■□□□ 1.47
SNRPB-202ENST00000438552 NUP155O75694 1391 aa24.26■■□□□ 1.47
SNRPB-202ENST00000438552 ARHGAP31Q2M1Z3 1444 aa24.26■■□□□ 1.47
SNRPB-202ENST00000438552 ERVK-7P63135 1459 aa24.26■■□□□ 1.47
SNRPB-202ENST00000438552 LMTK3Q96Q04 1460 aa24.26■■□□□ 1.47
SNRPB-202ENST00000438552 ZNF142P52746 1687 aaPredicted RBP24.24■■□□□ 1.47
SNRPB-202ENST00000438552 FBXO31Q5XUX0 539 aaPredicted RBP24.24■■□□□ 1.47
SNRPB-202ENST00000438552 SETD5Q9C0A6 1442 aa24.24■■□□□ 1.47
SNRPB-202ENST00000438552 UHRF1BP1Q6BDS2 1440 aa24.22■■□□□ 1.47
SNRPB-202ENST00000438552 TNRQ92752 1358 aa24.21■■□□□ 1.47
SNRPB-202ENST00000438552 RAB3GAP2Q9H2M9 1393 aa24.19■■□□□ 1.46
SNRPB-202ENST00000438552 SYNMO15061 1565 aa24.19■■□□□ 1.46
SNRPB-202ENST00000438552 CEP170BQ9Y4F5 1589 aaPredicted RBP24.19■■□□□ 1.46
SNRPB-202ENST00000438552 RPRD2Q5VT52 1461 aaKnown RBP24.19■■□□□ 1.46
SNRPB-202ENST00000438552 TRIM52Q96A61 297 aa24.16■■□□□ 1.46
SNRPB-202ENST00000438552 SPHKAPQ2M3C7 1700 aa24.15■■□□□ 1.46
SNRPB-202ENST00000438552 A2ML1A8K2U0 1454 aa24.13■■□□□ 1.45
SNRPB-202ENST00000438552 NLRP1Q9C000 1473 aa24.13■■□□□ 1.45
SNRPB-202ENST00000438552 NOS1P29475 1434 aa24.12■■□□□ 1.45
SNRPB-202ENST00000438552 TRIM26Q12899 539 aaPredicted RBP24.11■■□□□ 1.45
SNRPB-202ENST00000438552 PIK3C2BO00750 1634 aa24.1■■□□□ 1.45
SNRPB-202ENST00000438552 HSPA2P54652 639 aa24.09■■□□□ 1.45
SNRPB-202ENST00000438552 UGGT1Q9NYU2 1555 aa24.08■■□□□ 1.45
SNRPB-202ENST00000438552 UBR1Q8IWV7 1749 aa24.08■■□□□ 1.45
SNRPB-202ENST00000438552 SLC4A1APQ9BWU0 796 aaKnown RBP24.05■■□□□ 1.44
SNRPB-202ENST00000438552 TRPM2O94759 1503 aa24.03■■□□□ 1.44
SNRPB-202ENST00000438552 MYO5BQ9ULV0 1848 aa24.03■■□□□ 1.44
SNRPB-202ENST00000438552 KDM5AP29375 1690 aaKnown RBP24.02■■□□□ 1.44
SNRPB-202ENST00000438552 STRCQ7RTU9 1775 aa24.02■■□□□ 1.44
SNRPB-202ENST00000438552 ADGRB3O60242 1522 aa24.02■■□□□ 1.44
SNRPB-202ENST00000438552 PKD2Q13563 968 aa24.02■■□□□ 1.44
SNRPB-202ENST00000438552 CLTCL1P53675 1640 aa24.01■■□□□ 1.43
SNRPB-202ENST00000438552 PTPRTO14522 1441 aa24.01■■□□□ 1.43
SNRPB-202ENST00000438552 POLR1AO95602 1720 aaPredicted RBP24■■□□□ 1.43
SNRPB-202ENST00000438552 ACIN1Q9UKV3 1341 aaKnown RBP24■■□□□ 1.43
SNRPB-202ENST00000438552 MPHOSPH9Q99550 1183 aa23.99■■□□□ 1.43
SNRPB-202ENST00000438552 PLA2R1Q13018 1463 aa23.97■■□□□ 1.43
SNRPB-202ENST00000438552 FOXD1Q16676 465 aa23.97■■□□□ 1.43
SNRPB-202ENST00000438552 TMEM131LA2VDJ0 1609 aa23.96■■□□□ 1.43
SNRPB-202ENST00000438552 HRCP23327 699 aa23.96■■□□□ 1.43
SNRPB-202ENST00000438552 IDI1Q13907 227 aa23.96■■□□□ 1.43
SNRPB-202ENST00000438552 SLC52A1Q9NWF4 448 aa23.93■■□□□ 1.42
SNRPB-202ENST00000438552 KIF1BO60333 1816 aa23.93■■□□□ 1.42
SNRPB-202ENST00000438552 NEURL4Q96JN8 1562 aa23.91■■□□□ 1.42
SNRPB-202ENST00000438552 SLIT1O75093 1534 aa23.9■■□□□ 1.42
SNRPB-202ENST00000438552 THEMISQ8N1K5 641 aaPredicted RBP23.89■■□□□ 1.41
SNRPB-202ENST00000438552 STAG3Q9UJ98 1225 aa23.89■■□□□ 1.41
SNRPB-202ENST00000438552 ARHGAP23Q9P227 1491 aa23.88■■□□□ 1.41
SNRPB-202ENST00000438552 NCKAP5LQ9HCH0 1330 aa23.85■■□□□ 1.41
SNRPB-202ENST00000438552 CHGAP10645 457 aaKnown RBP23.85■■□□□ 1.41
SNRPB-202ENST00000438552 TMEM2Q9UHN6 1383 aa23.84■■□□□ 1.41
SNRPB-202ENST00000438552 FBXO41Q8TF61 875 aa23.84■■□□□ 1.41
SNRPB-202ENST00000438552 CCDC144AA2RUR9 1427 aa23.84■■□□□ 1.41
SNRPB-202ENST00000438552 IQGAP1P46940 1657 aa23.83■■□□□ 1.41
SNRPB-202ENST00000438552 SCAF11Q99590 1463 aaKnown RBP23.83■■□□□ 1.41
SNRPB-202ENST00000438552 PCGF6Q9BYE7 350 aa23.82■■□□□ 1.4
SNRPB-202ENST00000438552 ZFYVE9O95405 1425 aa23.8■■□□□ 1.4
SNRPB-202ENST00000438552 RIMS2Q9UQ26 1411 aa23.79■■□□□ 1.4
SNRPB-202ENST00000438552 ANKRD30BQ9BXX2 1392 aa23.78■■□□□ 1.4
SNRPB-202ENST00000438552 ANKLE2Q86XL3 938 aa23.78■■□□□ 1.4
SNRPB-202ENST00000438552 MED14O60244 1454 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms