RNA–Protein interactions for RNA: ENST00000437516.1

HLA-N-201, Transcript of major histocompatibility complex, class I, N (pseudogene), humanhuman

BASIC

Gene HLA-N, Length 135 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-N-201ENST00000437516 TSPY4P0CV99 314 aa5.74□□□□□ -1.49
HLA-N-201ENST00000437516 TSPY10P0CW01 314 aa5.74□□□□□ -1.49
HLA-N-201ENST00000437516 ABCC10Q5T3U5 1492 aa5.74□□□□□ -1.49
HLA-N-201ENST00000437516 PLB1Q6P1J6 1458 aa5.74□□□□□ -1.49
HLA-N-201ENST00000437516 CEP170Q5SW79 1584 aa5.74□□□□□ -1.49
HLA-N-201ENST00000437516 C9orf84Q5VXU9 1444 aa5.74□□□□□ -1.49
HLA-N-201ENST00000437516 MAGI1Q96QZ7 1491 aaPredicted RBP5.73□□□□□ -1.49
HLA-N-201ENST00000437516 ST20-MTHFSA0A0A6YYL1 179 aa5.73□□□□□ -1.49
HLA-N-201ENST00000437516 MS4A1P11836 297 aa5.73□□□□□ -1.49
HLA-N-201ENST00000437516 CNGB1Q14028 1251 aaPredicted RBP5.73□□□□□ -1.49
HLA-N-201ENST00000437516 RSPH4AQ5TD94 716 aa5.73□□□□□ -1.49
HLA-N-201ENST00000437516 RCAN3Q9UKA8 241 aa5.73□□□□□ -1.49
HLA-N-201ENST00000437516 ZMYM4Q5VZL5 1548 aa5.73□□□□□ -1.49
HLA-N-201ENST00000437516 WASHC2CQ9Y4E1 1318 aa5.73□□□□□ -1.49
HLA-N-201ENST00000437516 ABCA8O94911 1581 aa5.72□□□□□ -1.49
HLA-N-201ENST00000437516 ARHGEF5Q12774 1597 aa5.72□□□□□ -1.49
HLA-N-201ENST00000437516 SYNJ2O15056 1496 aa5.72□□□□□ -1.49
HLA-N-201ENST00000437516 PARD3Q8TEW0 1356 aa5.72□□□□□ -1.49
HLA-N-201ENST00000437516 NLRP13Q86W25 1043 aa5.72□□□□□ -1.49
HLA-N-201ENST00000437516 EXOC6Q8TAG9 804 aa5.72□□□□□ -1.49
HLA-N-201ENST00000437516 DCAF11Q8TEB1 546 aa5.72□□□□□ -1.49
HLA-N-201ENST00000437516 CHMP7Q8WUX9 453 aaPredicted RBP5.72□□□□□ -1.49
HLA-N-201ENST00000437516 JPH4Q96JJ6 628 aa5.72□□□□□ -1.49
HLA-N-201ENST00000437516 KDM2AQ9Y2K7 1162 aa5.72□□□□□ -1.49
HLA-N-201ENST00000437516 NUP160Q12769 1436 aa5.72□□□□□ -1.49
HLA-N-201ENST00000437516 E9PCH4 1651 aa5.72□□□□□ -1.49
HLA-N-201ENST00000437516 EIF4G3O43432 1585 aaKnown RBP5.72□□□□□ -1.49
HLA-N-201ENST00000437516 ATP10BO94823 1461 aa5.71□□□□□ -1.49
HLA-N-201ENST00000437516 NBR1Q14596 966 aa5.71□□□□□ -1.5
HLA-N-201ENST00000437516 RTL5Q5HYW3 569 aaPredicted RBP5.71□□□□□ -1.5
HLA-N-201ENST00000437516 GPRASP1Q5JY77 1395 aa5.7□□□□□ -1.5
HLA-N-201ENST00000437516 PER1O15534 1290 aaPredicted RBP5.7□□□□□ -1.5
HLA-N-201ENST00000437516 PDE4AP27815 886 aa5.7□□□□□ -1.5
HLA-N-201ENST00000437516 HNRNPMP52272 730 aaKnown RBP eCLIP5.7□□□□□ -1.5
HLA-N-201ENST00000437516 BACH2Q9BYV9 841 aa5.7□□□□□ -1.5
HLA-N-201ENST00000437516 PRAG1Q86YV5 1406 aa5.7□□□□□ -1.5
HLA-N-201ENST00000437516 CDC42BPAQ5VT25 1732 aa5.7□□□□□ -1.5
HLA-N-201ENST00000437516 LAMC1P11047 1609 aa5.7□□□□□ -1.5
HLA-N-201ENST00000437516 BLMP54132 1417 aaPredicted RBP5.69□□□□□ -1.5
HLA-N-201ENST00000437516 PPM1GO15355 546 aaPredicted RBP5.69□□□□□ -1.5
HLA-N-201ENST00000437516 DDRGK1Q96HY6 314 aa5.69□□□□□ -1.5
HLA-N-201ENST00000437516 TRPM1Q7Z4N2 1603 aa5.69□□□□□ -1.5
HLA-N-201ENST00000437516 CCDC141Q6ZP82 1450 aa5.69□□□□□ -1.5
HLA-N-201ENST00000437516 PLEKHH2Q8IVE3 1493 aa5.69□□□□□ -1.5
HLA-N-201ENST00000437516 COL17A1Q9UMD9 1497 aaPredicted RBP5.69□□□□□ -1.5
HLA-N-201ENST00000437516 FAM135AQ9P2D6 1515 aa5.69□□□□□ -1.5
HLA-N-201ENST00000437516 MAST1Q9Y2H9 1570 aa5.68□□□□□ -1.5
HLA-N-201ENST00000437516 CCDC144AA2RUR9 1427 aa5.68□□□□□ -1.5
HLA-N-201ENST00000437516 USP35Q9P2H5 1018 aa5.68□□□□□ -1.5
HLA-N-201ENST00000437516 ERBINQ96RT1 1412 aa5.67□□□□□ -1.5
HLA-N-201ENST00000437516 SENP3-EIF4A1A0A087X0R7 540 aa5.67□□□□□ -1.5
HLA-N-201ENST00000437516 TMF1P82094 1093 aa5.67□□□□□ -1.5
HLA-N-201ENST00000437516 PRDM15P57071 1507 aaPredicted RBP5.67□□□□□ -1.5
HLA-N-201ENST00000437516 UNC13BO14795 1591 aa5.67□□□□□ -1.5
HLA-N-201ENST00000437516 EIF2AK4Q9P2K8 1649 aaKnown RBP5.66□□□□□ -1.5
HLA-N-201ENST00000437516 A2MP01023 1474 aa5.66□□□□□ -1.5
HLA-N-201ENST00000437516 FBLN2P98095 1184 aa5.66□□□□□ -1.5
HLA-N-201ENST00000437516 NBPF1Q3BBV0 1214 aa5.66□□□□□ -1.5
HLA-N-201ENST00000437516 NPM2Q86SE8 214 aaKnown RBP5.66□□□□□ -1.5
HLA-N-201ENST00000437516 FBXO41Q8TF61 875 aa5.66□□□□□ -1.5
HLA-N-201ENST00000437516 CDCA7LQ96GN5 454 aa5.66□□□□□ -1.5
HLA-N-201ENST00000437516 TESK2Q96S53 571 aa5.66□□□□□ -1.5
HLA-N-201ENST00000437516 CRBNQ96SW2 442 aa5.66□□□□□ -1.5
HLA-N-201ENST00000437516 PANK3Q9H999 370 aa5.66□□□□□ -1.5
HLA-N-201ENST00000437516 SALL2Q9Y467 1007 aaPredicted RBP5.66□□□□□ -1.5
HLA-N-201ENST00000437516 SAMD9LQ8IVG5 1584 aa5.66□□□□□ -1.5
HLA-N-201ENST00000437516 ATP10AO60312 1499 aa5.65□□□□□ -1.5
HLA-N-201ENST00000437516 PLA2R1Q13018 1463 aa5.65□□□□□ -1.5
HLA-N-201ENST00000437516 RGL3Q3MIN7 710 aa5.65□□□□□ -1.5
HLA-N-201ENST00000437516 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.65□□□□□ -1.5
HLA-N-201ENST00000437516 STAC3Q96MF2 364 aa5.65□□□□□ -1.5
HLA-N-201ENST00000437516 DISP3Q9P2K9 1392 aa5.65□□□□□ -1.51
HLA-N-201ENST00000437516 PREX2Q70Z35 1606 aa5.64□□□□□ -1.51
HLA-N-201ENST00000437516 NEFMP07197 916 aa5.64□□□□□ -1.51
HLA-N-201ENST00000437516 CC2D1BQ5T0F9 858 aaKnown RBP5.64□□□□□ -1.51
HLA-N-201ENST00000437516 CENPQQ7L2Z9 268 aaPredicted RBP5.64□□□□□ -1.51
HLA-N-201ENST00000437516 ERCC6Q03468 1493 aa5.64□□□□□ -1.51
HLA-N-201ENST00000437516 DUOX2Q9NRD8 1548 aa5.64□□□□□ -1.51
HLA-N-201ENST00000437516 PLXNC1O60486 1568 aa5.63□□□□□ -1.51
HLA-N-201ENST00000437516 IQGAP3Q86VI3 1631 aa5.63□□□□□ -1.51
HLA-N-201ENST00000437516 PLIN1O60240 522 aa5.63□□□□□ -1.51
HLA-N-201ENST00000437516 WDR43Q15061 677 aaKnown RBP eCLIP5.63□□□□□ -1.51
HLA-N-201ENST00000437516 CDCA8Q53HL2 280 aa5.63□□□□□ -1.51
HLA-N-201ENST00000437516 KDM2BQ8NHM5 1336 aa5.63□□□□□ -1.51
HLA-N-201ENST00000437516 MAGI2Q86UL8 1455 aa5.63□□□□□ -1.51
HLA-N-201ENST00000437516 CLASP1Q7Z460 1538 aa5.63□□□□□ -1.51
HLA-N-201ENST00000437516 PPP2R1AP30153 589 aa5.62□□□□□ -1.51
HLA-N-201ENST00000437516 GOLGA2Q08379 1002 aa5.62□□□□□ -1.51
HLA-N-201ENST00000437516 FAM161AQ3B820 660 aa5.62□□□□□ -1.51
HLA-N-201ENST00000437516 DUSP27Q5VZP5 1158 aa5.62□□□□□ -1.51
HLA-N-201ENST00000437516 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.62□□□□□ -1.51
HLA-N-201ENST00000437516 ADAMTS8Q9UP79 889 aa5.62□□□□□ -1.51
HLA-N-201ENST00000437516 KNSTRNQ9Y448 316 aa5.62□□□□□ -1.51
HLA-N-201ENST00000437516 LAS1LQ9Y4W2 734 aaKnown RBP5.62□□□□□ -1.51
HLA-N-201ENST00000437516 ZNF521Q96K83 1311 aa5.62□□□□□ -1.51
HLA-N-201ENST00000437516 EIF3AQ14152 1382 aaKnown RBP5.62□□□□□ -1.51
HLA-N-201ENST00000437516 NPC1L1Q9UHC9 1359 aa5.62□□□□□ -1.51
HLA-N-201ENST00000437516 SYCP2Q9BX26 1530 aa5.62□□□□□ -1.51
HLA-N-201ENST00000437516 RNF17Q9BXT8 1623 aaKnown RBP5.62□□□□□ -1.51
HLA-N-201ENST00000437516 SLC24A1O60721 1099 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms