RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 LOC105371045A0A1W2PR82 267 aa9.81□□□□□ -0.84
ECHDC1-208ENST00000436638 TNIKQ9UKE5 1360 aa9.8□□□□□ -0.84
ECHDC1-208ENST00000436638 SHROOM2Q13796 1616 aa9.8□□□□□ -0.84
ECHDC1-208ENST00000436638 ARHGEF11O15085 1522 aa9.8□□□□□ -0.84
ECHDC1-208ENST00000436638 UGGT2Q9NYU1 1516 aa9.79□□□□□ -0.84
ECHDC1-208ENST00000436638 PAXIP1Q6ZW49 1069 aaPredicted RBP9.78□□□□□ -0.84
ECHDC1-208ENST00000436638 P3H3Q8IVL6 736 aa9.78□□□□□ -0.84
ECHDC1-208ENST00000436638 SPRYD3Q8NCJ5 442 aa9.78□□□□□ -0.84
ECHDC1-208ENST00000436638 CFAP44Q96MT7 982 aa9.78□□□□□ -0.84
ECHDC1-208ENST00000436638 RIMBP3CA6NJZ7 1639 aa9.78□□□□□ -0.84
ECHDC1-208ENST00000436638 RIMBP3BA6NNM3 1639 aa9.78□□□□□ -0.84
ECHDC1-208ENST00000436638 RIMBP3Q9UFD9 1639 aa9.78□□□□□ -0.84
ECHDC1-208ENST00000436638 CYB5RLQ6IPT4 315 aa9.76□□□□□ -0.85
ECHDC1-208ENST00000436638 PTPRGP23470 1445 aa9.75□□□□□ -0.85
ECHDC1-208ENST00000436638 TMEM92Q6UXU6 159 aa9.75□□□□□ -0.85
ECHDC1-208ENST00000436638 ERCC6L2Q5T890 1561 aa9.75□□□□□ -0.85
ECHDC1-208ENST00000436638 KIAA0556O60303 1618 aa9.74□□□□□ -0.85
ECHDC1-208ENST00000436638 EFCAB5A4FU69 1503 aa9.74□□□□□ -0.85
ECHDC1-208ENST00000436638 DISP1Q96F81 1524 aa9.74□□□□□ -0.85
ECHDC1-208ENST00000436638 CLIP1P30622 1438 aa9.73□□□□□ -0.85
ECHDC1-208ENST00000436638 FAM163AQ96GL9 167 aaPredicted RBP9.73□□□□□ -0.85
ECHDC1-208ENST00000436638 ARAP1Q96P48 1450 aa9.72□□□□□ -0.85
ECHDC1-208ENST00000436638 TMC2Q8TDI7 906 aa9.72□□□□□ -0.85
ECHDC1-208ENST00000436638 SNPHO15079 494 aa9.71□□□□□ -0.86
ECHDC1-208ENST00000436638 FHOD3Q2V2M9 1422 aa9.71□□□□□ -0.86
ECHDC1-208ENST00000436638 CEP162Q5TB80 1403 aa9.71□□□□□ -0.86
ECHDC1-208ENST00000436638 SAMD9Q5K651 1589 aa9.71□□□□□ -0.86
ECHDC1-208ENST00000436638 C2orf72A6NCS6 295 aa9.7□□□□□ -0.86
ECHDC1-208ENST00000436638 ARHGAP35Q9NRY4 1499 aa9.7□□□□□ -0.86
ECHDC1-208ENST00000436638 ARXQ96QS3 562 aa9.69□□□□□ -0.86
ECHDC1-208ENST00000436638 ATP1B4Q9UN42 357 aaPredicted RBP9.69□□□□□ -0.86
ECHDC1-208ENST00000436638 FMN1Q68DA7 1419 aa9.68□□□□□ -0.86
ECHDC1-208ENST00000436638 UACAQ9BZF9 1416 aa9.68□□□□□ -0.86
ECHDC1-208ENST00000436638 KIF3CO14782 793 aa9.65□□□□□ -0.86
ECHDC1-208ENST00000436638 PLB1Q6P1J6 1458 aa9.65□□□□□ -0.87
ECHDC1-208ENST00000436638 GPHNQ9NQX3 736 aaPredicted RBP9.64□□□□□ -0.87
ECHDC1-208ENST00000436638 ABCC2Q92887 1545 aa9.63□□□□□ -0.87
ECHDC1-208ENST00000436638 ARID3CA6NKF2 412 aa9.63□□□□□ -0.87
ECHDC1-208ENST00000436638 PDE4AP27815 886 aa9.63□□□□□ -0.87
ECHDC1-208ENST00000436638 ZNF710Q8N1W2 664 aa9.63□□□□□ -0.87
ECHDC1-208ENST00000436638 UHRF1BP1LA0JNW5 1464 aa9.63□□□□□ -0.87
ECHDC1-208ENST00000436638 RAPGEF6Q8TEU7 1601 aa9.63□□□□□ -0.87
ECHDC1-208ENST00000436638 ABCA8O94911 1581 aa9.63□□□□□ -0.87
ECHDC1-208ENST00000436638 ST18O60284 1047 aa9.62□□□□□ -0.87
ECHDC1-208ENST00000436638 DOK7Q18PE1 504 aa9.62□□□□□ -0.87
ECHDC1-208ENST00000436638 CADPS2Q86UW7 1296 aa9.62□□□□□ -0.87
ECHDC1-208ENST00000436638 HOXB3P14651 431 aaPredicted RBP9.61□□□□□ -0.87
ECHDC1-208ENST00000436638 LARP6Q9BRS8 491 aaKnown RBP9.61□□□□□ -0.87
ECHDC1-208ENST00000436638 ADCY10Q96PN6 1610 aa9.6□□□□□ -0.87
ECHDC1-208ENST00000436638 NCKAP5LQ9HCH0 1330 aa9.6□□□□□ -0.87
ECHDC1-208ENST00000436638 RIMBP2O15034 1052 aa9.6□□□□□ -0.87
ECHDC1-208ENST00000436638 PLCB2Q00722 1185 aa9.6□□□□□ -0.87
ECHDC1-208ENST00000436638 CRISPLD2Q9H0B8 497 aa9.6□□□□□ -0.87
ECHDC1-208ENST00000436638 VPS8Q8N3P4 1428 aa9.59□□□□□ -0.87
ECHDC1-208ENST00000436638 CASKIN1Q8WXD9 1431 aa9.59□□□□□ -0.87
ECHDC1-208ENST00000436638 FOXK1P85037 733 aa9.59□□□□□ -0.87
ECHDC1-208ENST00000436638 DSG2Q14126 1118 aa9.59□□□□□ -0.87
ECHDC1-208ENST00000436638 PLPP6Q8IY26 295 aa9.59□□□□□ -0.87
ECHDC1-208ENST00000436638 CDK11AQ9UQ88 783 aaPredicted RBP9.59□□□□□ -0.87
ECHDC1-208ENST00000436638 HECW1Q76N89 1606 aa9.59□□□□□ -0.87
ECHDC1-208ENST00000436638 FYCO1Q9BQS8 1478 aa9.58□□□□□ -0.88
ECHDC1-208ENST00000436638 KDM5BQ9UGL1 1544 aa9.57□□□□□ -0.88
ECHDC1-208ENST00000436638 PLEKHD1A6NEE1 506 aa9.57□□□□□ -0.88
ECHDC1-208ENST00000436638 LCE2DQ5TA82 110 aaPredicted RBP9.57□□□□□ -0.88
ECHDC1-208ENST00000436638 ATP10BO94823 1461 aa9.57□□□□□ -0.88
ECHDC1-208ENST00000436638 NUP153P49790 1475 aaKnown RBP9.57□□□□□ -0.88
ECHDC1-208ENST00000436638 PCF11O94913 1555 aaKnown RBP9.57□□□□□ -0.88
ECHDC1-208ENST00000436638 CCDC18Q5T9S5 1454 aa9.56□□□□□ -0.88
ECHDC1-208ENST00000436638 PPP1R15BQ5SWA1 713 aa9.56□□□□□ -0.88
ECHDC1-208ENST00000436638 DDX27Q96GQ7 796 aaKnown RBP9.56□□□□□ -0.88
ECHDC1-208ENST00000436638 ZCCHC11Q5TAX3 1644 aaKnown RBP9.56□□□□□ -0.88
ECHDC1-208ENST00000436638 TSHZ2Q9NRE2 1034 aa9.55□□□□□ -0.88
ECHDC1-208ENST00000436638 EPRSP07814 1512 aaKnown RBP9.55□□□□□ -0.88
ECHDC1-208ENST00000436638 MARVELD3Q96A59 401 aa9.54□□□□□ -0.88
ECHDC1-208ENST00000436638 ASXL2Q76L83 1435 aa9.54□□□□□ -0.88
ECHDC1-208ENST00000436638 MAPKBP1O60336 1514 aa9.53□□□□□ -0.88
ECHDC1-208ENST00000436638 KCNH8Q96L42 1107 aa9.53□□□□□ -0.88
ECHDC1-208ENST00000436638 CDK13Q14004 1512 aaKnown RBP9.52□□□□□ -0.88
ECHDC1-208ENST00000436638 ARSIQ5FYB1 569 aa9.52□□□□□ -0.89
ECHDC1-208ENST00000436638 POTEGQ6S5H5 508 aa9.52□□□□□ -0.89
ECHDC1-208ENST00000436638 ZSWIM6Q9HCJ5 1215 aa9.52□□□□□ -0.89
ECHDC1-208ENST00000436638 MTUS2Q5JR59 1369 aa9.51□□□□□ -0.89
ECHDC1-208ENST00000436638 POTEMA6NI47 508 aa9.51□□□□□ -0.89
ECHDC1-208ENST00000436638 HOXB1P14653 301 aaPredicted RBP9.51□□□□□ -0.89
ECHDC1-208ENST00000436638 HAP1P54257 671 aaPredicted RBP9.51□□□□□ -0.89
ECHDC1-208ENST00000436638 FAM69CQ0P6D2 419 aa9.51□□□□□ -0.89
ECHDC1-208ENST00000436638 MFSD10Q14728 455 aa9.51□□□□□ -0.89
ECHDC1-208ENST00000436638 WDR7Q9Y4E6 1490 aa9.51□□□□□ -0.89
ECHDC1-208ENST00000436638 SLC34A2O95436 690 aa9.5□□□□□ -0.89
ECHDC1-208ENST00000436638 EMP3P54852 163 aa9.5□□□□□ -0.89
ECHDC1-208ENST00000436638 GPR153Q6NV75 609 aa9.49□□□□□ -0.89
ECHDC1-208ENST00000436638 UPF1Q92900 1129 aaKnown RBP eCLIP9.49□□□□□ -0.89
ECHDC1-208ENST00000436638 KHSRPQ92945 711 aaKnown RBP eCLIP9.49□□□□□ -0.892e-12■■■□□ 17
ECHDC1-208ENST00000436638 WDR70Q9NW82 654 aa9.49□□□□□ -0.89
ECHDC1-208ENST00000436638 PCDHGA4Q9Y5G9 962 aa9.49□□□□□ -0.89
ECHDC1-208ENST00000436638 TROQ12816 1431 aaPredicted RBP9.48□□□□□ -0.89
ECHDC1-208ENST00000436638 ABCC10Q5T3U5 1492 aa9.48□□□□□ -0.89
ECHDC1-208ENST00000436638 MAP3K1Q13233 1512 aa9.47□□□□□ -0.89
ECHDC1-208ENST00000436638 TBC1D12O60347 775 aa9.47□□□□□ -0.89
ECHDC1-208ENST00000436638 LRRIQ1Q96JM4 1722 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms