RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 NEFMP07197 916 aa14.08□□□□□ -0.15
SCAF4-203ENST00000434667 TMC1Q8TDI8 760 aa14.08□□□□□ -0.15
SCAF4-203ENST00000434667 TROQ12816 1431 aaPredicted RBP14.08□□□□□ -0.15
SCAF4-203ENST00000434667 ANKRD30BQ9BXX2 1392 aa14.08□□□□□ -0.16
SCAF4-203ENST00000434667 RNF17Q9BXT8 1623 aaKnown RBP14.08□□□□□ -0.16
SCAF4-203ENST00000434667 MYO5CQ9NQX4 1742 aa14.08□□□□□ -0.16
SCAF4-203ENST00000434667 DEPDC5O75140 1603 aa14.07□□□□□ -0.16
SCAF4-203ENST00000434667 ZNF777Q9ULD5 760 aaPredicted RBP14.06□□□□□ -0.16
SCAF4-203ENST00000434667 IQGAP3Q86VI3 1631 aa14.06□□□□□ -0.16
SCAF4-203ENST00000434667 CDCA7LQ96GN5 454 aa14.05□□□□□ -0.16
SCAF4-203ENST00000434667 PLB1Q6P1J6 1458 aa14.05□□□□□ -0.16
SCAF4-203ENST00000434667 ARHGEF12Q9NZN5 1544 aa14.05□□□□□ -0.16
SCAF4-203ENST00000434667 UHRF1BP1Q6BDS2 1440 aa14.04□□□□□ -0.16
SCAF4-203ENST00000434667 TRPM1Q7Z4N2 1603 aa14.04□□□□□ -0.16
SCAF4-203ENST00000434667 TTC37Q6PGP7 1564 aa14.03□□□□□ -0.16
SCAF4-203ENST00000434667 PNISRQ8TF01 805 aaKnown RBP14.02□□□□□ -0.17
SCAF4-203ENST00000434667 BRPF3Q9ULD4 1205 aa14.02□□□□□ -0.17
SCAF4-203ENST00000434667 SMG6Q86US8 1419 aaKnown RBP14.01□□□□□ -0.17
SCAF4-203ENST00000434667 PDE4AP27815 886 aa14.01□□□□□ -0.17
SCAF4-203ENST00000434667 MYT1LQ9UL68 1186 aa14.01□□□□□ -0.17
SCAF4-203ENST00000434667 ATP10BO94823 1461 aa14.01□□□□□ -0.17
SCAF4-203ENST00000434667 DHX29Q7Z478 1369 aaKnown RBP14.01□□□□□ -0.17
SCAF4-203ENST00000434667 NEURL4Q96JN8 1562 aa14□□□□□ -0.17
SCAF4-203ENST00000434667 USP47Q96K76 1375 aa13.97□□□□□ -0.17
SCAF4-203ENST00000434667 RRP1P56182 461 aaKnown RBP13.97□□□□□ -0.17
SCAF4-203ENST00000434667 IFT172Q9UG01 1749 aa13.96□□□□□ -0.17
SCAF4-203ENST00000434667 ARAP3Q8WWN8 1544 aa13.96□□□□□ -0.17
SCAF4-203ENST00000434667 PRG4Q92954 1404 aaPredicted RBP13.96□□□□□ -0.17
SCAF4-203ENST00000434667 ST20-MTHFSA0A0A6YYL1 179 aa13.96□□□□□ -0.17
SCAF4-203ENST00000434667 VWDEQ8N2E2 1590 aa13.96□□□□□ -0.17
SCAF4-203ENST00000434667 ATP10AO60312 1499 aa13.96□□□□□ -0.18
SCAF4-203ENST00000434667 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.96□□□□□ -0.181e-23■■■■□ 23.1
SCAF4-203ENST00000434667 PKD2Q13563 968 aa13.95□□□□□ -0.18
SCAF4-203ENST00000434667 RCAN3Q9UKA8 241 aa13.95□□□□□ -0.18
SCAF4-203ENST00000434667 CARD11Q9BXL7 1154 aa13.95□□□□□ -0.18
SCAF4-203ENST00000434667 RNF123Q5XPI4 1314 aa13.94□□□□□ -0.18
SCAF4-203ENST00000434667 C20orf194Q5TEA3 1177 aa13.94□□□□□ -0.18
SCAF4-203ENST00000434667 CC2D1BQ5T0F9 858 aaKnown RBP13.94□□□□□ -0.18
SCAF4-203ENST00000434667 ZCCHC11Q5TAX3 1644 aaKnown RBP13.93□□□□□ -0.18
SCAF4-203ENST00000434667 ERCC6L2Q5T890 1561 aa13.93□□□□□ -0.18
SCAF4-203ENST00000434667 UHRF1BP1LA0JNW5 1464 aa13.93□□□□□ -0.18
SCAF4-203ENST00000434667 ABCA9Q8IUA7 1624 aa13.93□□□□□ -0.18
SCAF4-203ENST00000434667 RALGAPBQ86X10 1494 aa13.92□□□□□ -0.18
SCAF4-203ENST00000434667 CEP152O94986 1710 aa13.92□□□□□ -0.18
SCAF4-203ENST00000434667 CRBNQ96SW2 442 aa13.92□□□□□ -0.18
SCAF4-203ENST00000434667 BACH2Q9BYV9 841 aa13.91□□□□□ -0.18
SCAF4-203ENST00000434667 IQGAP1P46940 1657 aa13.91□□□□□ -0.18
SCAF4-203ENST00000434667 ABCC2Q92887 1545 aa13.9□□□□□ -0.18
SCAF4-203ENST00000434667 RGL3Q3MIN7 710 aa13.9□□□□□ -0.18
SCAF4-203ENST00000434667 MROH1Q8NDA8 1641 aa13.9□□□□□ -0.19
SCAF4-203ENST00000434667 DCAF11Q8TEB1 546 aa13.89□□□□□ -0.19
SCAF4-203ENST00000434667 INO80Q9ULG1 1556 aaPredicted RBP13.89□□□□□ -0.19
SCAF4-203ENST00000434667 SPHKAPQ2M3C7 1700 aa13.89□□□□□ -0.19
SCAF4-203ENST00000434667 PRDM15P57071 1507 aaPredicted RBP13.88□□□□□ -0.19
SCAF4-203ENST00000434667 ABCC1P33527 1531 aa13.87□□□□□ -0.19
SCAF4-203ENST00000434667 KIAA1107Q9UPP5 1409 aa13.87□□□□□ -0.19
SCAF4-203ENST00000434667 KIAA1210Q9ULL0 1709 aa13.86□□□□□ -0.19
SCAF4-203ENST00000434667 PLA2R1Q13018 1463 aa13.86□□□□□ -0.19
SCAF4-203ENST00000434667 MYOM1P52179 1685 aa13.86□□□□□ -0.19
SCAF4-203ENST00000434667 RGS3P49796 1198 aa13.86□□□□□ -0.19
SCAF4-203ENST00000434667 TCERG1O14776 1098 aaKnown RBP13.85□□□□□ -0.19
SCAF4-203ENST00000434667 FRAT1Q92837 279 aaPredicted RBP13.85□□□□□ -0.19
SCAF4-203ENST00000434667 EIF2AK4Q9P2K8 1649 aaKnown RBP13.84□□□□□ -0.19
SCAF4-203ENST00000434667 ARID4BQ4LE39 1312 aaPredicted RBP13.84□□□□□ -0.19
SCAF4-203ENST00000434667 NFKBIBQ15653 356 aa13.84□□□□□ -0.19
SCAF4-203ENST00000434667 FAM135AQ9P2D6 1515 aa13.84□□□□□ -0.19
SCAF4-203ENST00000434667 NBPF1Q3BBV0 1214 aa13.83□□□□□ -0.19
SCAF4-203ENST00000434667 CFDP1Q9UEE9 299 aaPredicted RBP13.83□□□□□ -0.2
SCAF4-203ENST00000434667 MADDQ8WXG6 1647 aa13.82□□□□□ -0.2
SCAF4-203ENST00000434667 ZMYM4Q5VZL5 1548 aa13.81□□□□□ -0.2
SCAF4-203ENST00000434667 MYBBP1AQ9BQG0 1328 aaKnown RBP13.81□□□□□ -0.2
SCAF4-203ENST00000434667 ZC3H13Q5T200 1668 aaKnown RBP13.81□□□□□ -0.2
SCAF4-203ENST00000434667 FRAT2O75474 233 aaPredicted RBP13.81□□□□□ -0.2
SCAF4-203ENST00000434667 MYO3AQ8NEV4 1616 aa13.8□□□□□ -0.2
SCAF4-203ENST00000434667 ZFYVE16Q7Z3T8 1539 aa13.8□□□□□ -0.2
SCAF4-203ENST00000434667 C9orf84Q5VXU9 1444 aa13.79□□□□□ -0.2
SCAF4-203ENST00000434667 SYCP2Q9BX26 1530 aa13.79□□□□□ -0.2
SCAF4-203ENST00000434667 GSE1Q14687 1217 aa13.79□□□□□ -0.2
SCAF4-203ENST00000434667 CCDC141Q6ZP82 1450 aa13.78□□□□□ -0.2
SCAF4-203ENST00000434667 KIF15Q9NS87 1388 aa13.78□□□□□ -0.2
SCAF4-203ENST00000434667 GPRASP1Q5JY77 1395 aa13.78□□□□□ -0.2
SCAF4-203ENST00000434667 NUP155O75694 1391 aa13.77□□□□□ -0.21
SCAF4-203ENST00000434667 ERCC6Q03468 1493 aa13.77□□□□□ -0.21
SCAF4-203ENST00000434667 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.77□□□□□ -0.219e-9■■□□□ 12.6
SCAF4-203ENST00000434667 CARMIL2Q6F5E8 1435 aa13.76□□□□□ -0.21
SCAF4-203ENST00000434667 LRPPRCP42704 1394 aaKnown RBP13.76□□□□□ -0.21
SCAF4-203ENST00000434667 PPM1GO15355 546 aaPredicted RBP13.75□□□□□ -0.21
SCAF4-203ENST00000434667 TET3O43151 1660 aa13.75□□□□□ -0.21
SCAF4-203ENST00000434667 FBLN2P98095 1184 aa13.75□□□□□ -0.21
SCAF4-203ENST00000434667 CCDC146Q8IYE0 955 aa13.74□□□□□ -0.21
SCAF4-203ENST00000434667 WDR7Q9Y4E6 1490 aa13.74□□□□□ -0.21
SCAF4-203ENST00000434667 NLRP13Q86W25 1043 aa13.74□□□□□ -0.21
SCAF4-203ENST00000434667 PANK3Q9H999 370 aa13.74□□□□□ -0.21
SCAF4-203ENST00000434667 ADAMTS8Q9UP79 889 aa13.74□□□□□ -0.21
SCAF4-203ENST00000434667 DUOX2Q9NRD8 1548 aa13.74□□□□□ -0.21
SCAF4-203ENST00000434667 ROCK2O75116 1388 aaKnown RBP13.74□□□□□ -0.21
SCAF4-203ENST00000434667 WASHC2CQ9Y4E1 1318 aa13.74□□□□□ -0.21
SCAF4-203ENST00000434667 TRPM2O94759 1503 aa13.73□□□□□ -0.21
SCAF4-203ENST00000434667 ANKRD50Q9ULJ7 1429 aa13.73□□□□□ -0.21
SCAF4-203ENST00000434667 HNRNPMP52272 730 aaKnown RBP eCLIP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms