RNA–Protein interactions for RNA: ENST00000434436.7

MBD3-202, Transcript of methyl-CpG binding domain protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MBD3, Length 2,439 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-202ENST00000434436 KDM2AQ9Y2K7 1162 aa33.03■■■□□ 2.88
MBD3-202ENST00000434436 RTEL1-TNFRSF6BF6WH68 1400 aa33.01■■■□□ 2.87
MBD3-202ENST00000434436 ZFYVE16Q7Z3T8 1539 aa33■■■□□ 2.87
MBD3-202ENST00000434436 AFAP1Q8N556 730 aa33■■■□□ 2.87
MBD3-202ENST00000434436 SPAG9O60271 1321 aaKnown RBP33■■■□□ 2.87
MBD3-202ENST00000434436 FANCAO15360 1455 aa32.97■■■□□ 2.87
MBD3-202ENST00000434436 ASXL2Q76L83 1435 aa32.97■■■□□ 2.87
MBD3-202ENST00000434436 CARD11Q9BXL7 1154 aa32.96■■■□□ 2.87
MBD3-202ENST00000434436 PRKRIP1Q9H875 184 aaPredicted RBP32.96■■■□□ 2.87
MBD3-202ENST00000434436 SUPT16HQ9Y5B9 1047 aaKnown RBP32.96■■■□□ 2.87
MBD3-202ENST00000434436 OSCARQ8IYS5 282 aa32.96■■■□□ 2.87
MBD3-202ENST00000434436 ATP10AO60312 1499 aa32.94■■■□□ 2.86
MBD3-202ENST00000434436 PRAG1Q86YV5 1406 aa32.91■■■□□ 2.86
MBD3-202ENST00000434436 TRPM1Q7Z4N2 1603 aa32.9■■■□□ 2.86
MBD3-202ENST00000434436 INO80Q9ULG1 1556 aaPredicted RBP32.9■■■□□ 2.86
MBD3-202ENST00000434436 A2MP01023 1474 aa32.9■■■□□ 2.86
MBD3-202ENST00000434436 CCDC184Q52MB2 194 aa32.89■■■□□ 2.86
MBD3-202ENST00000434436 ARID4BQ4LE39 1312 aaPredicted RBP32.89■■■□□ 2.85
MBD3-202ENST00000434436 RGL3Q3MIN7 710 aa32.88■■■□□ 2.85
MBD3-202ENST00000434436 ATP7AQ04656 1500 aa32.87■■■□□ 2.85
MBD3-202ENST00000434436 ADGRL1O94910 1474 aa32.85■■■□□ 2.85
MBD3-202ENST00000434436 ROCK2O75116 1388 aaKnown RBP32.85■■■□□ 2.85
MBD3-202ENST00000434436 DEPDC5O75140 1603 aa32.84■■■□□ 2.85
MBD3-202ENST00000434436 DHX29Q7Z478 1369 aaKnown RBP32.84■■■□□ 2.85
MBD3-202ENST00000434436 E9PCH4 1651 aa32.84■■■□□ 2.85
MBD3-202ENST00000434436 SCAPERQ9BY12 1400 aa32.84■■■□□ 2.85
MBD3-202ENST00000434436 ST20-MTHFSA0A0A6YYL1 179 aa32.82■■■□□ 2.84
MBD3-202ENST00000434436 POLR3GLQ9BT43 218 aa32.8■■■□□ 2.84
MBD3-202ENST00000434436 HNRNPUQ00839 825 aaKnown RBP eCLIP32.77■■■□□ 2.84
MBD3-202ENST00000434436 GPRASP1Q5JY77 1395 aa32.75■■■□□ 2.83
MBD3-202ENST00000434436 NBPF1Q3BBV0 1214 aa32.75■■■□□ 2.83
MBD3-202ENST00000434436 NPM1P06748 294 aaKnown RBP eCLIP32.74■■■□□ 2.83
MBD3-202ENST00000434436 LAMC1P11047 1609 aa32.73■■■□□ 2.83
MBD3-202ENST00000434436 MRS2Q9HD23 443 aa32.72■■■□□ 2.83
MBD3-202ENST00000434436 VWDEQ8N2E2 1590 aa32.72■■■□□ 2.83
MBD3-202ENST00000434436 PELP1Q8IZL8 1130 aaKnown RBP32.72■■■□□ 2.83
MBD3-202ENST00000434436 TET3O43151 1660 aa32.72■■■□□ 2.83
MBD3-202ENST00000434436 SPHKAPQ2M3C7 1700 aa32.71■■■□□ 2.83
MBD3-202ENST00000434436 EIF2AK4Q9P2K8 1649 aaKnown RBP32.71■■■□□ 2.83
MBD3-202ENST00000434436 TRPM2O94759 1503 aa32.7■■■□□ 2.83
MBD3-202ENST00000434436 KIDINS220Q9ULH0 1771 aa32.69■■■□□ 2.82
MBD3-202ENST00000434436 PTPRTO14522 1441 aa32.69■■■□□ 2.82
MBD3-202ENST00000434436 PRDM15P57071 1507 aaPredicted RBP32.67■■■□□ 2.82
MBD3-202ENST00000434436 MYT1LQ9UL68 1186 aa32.67■■■□□ 2.82
MBD3-202ENST00000434436 MROH1Q8NDA8 1641 aa32.66■■■□□ 2.82
MBD3-202ENST00000434436 KIF3BO15066 747 aa32.66■■■□□ 2.82
MBD3-202ENST00000434436 CEP152O94986 1710 aa32.66■■■□□ 2.82
MBD3-202ENST00000434436 KANK1Q14678 1352 aa32.64■■■□□ 2.82
MBD3-202ENST00000434436 CLTCL1P53675 1640 aa32.64■■■□□ 2.81
MBD3-202ENST00000434436 FAM9BQ8IZU0 186 aa32.63■■■□□ 2.81
MBD3-202ENST00000434436 CD109Q6YHK3 1445 aa32.62■■■□□ 2.81
MBD3-202ENST00000434436 FKBP8Q14318 412 aa32.62■■■□□ 2.81
MBD3-202ENST00000434436 ZNF518AQ6AHZ1 1483 aa32.62■■■□□ 2.81
MBD3-202ENST00000434436 RNF17Q9BXT8 1623 aaKnown RBP32.6■■■□□ 2.81
MBD3-202ENST00000434436 CFAP74Q9C0B2 1584 aa32.59■■■□□ 2.81
MBD3-202ENST00000434436 MADDQ8WXG6 1647 aa32.57■■■□□ 2.8
MBD3-202ENST00000434436 CNGB1Q14028 1251 aaPredicted RBP32.57■■■□□ 2.8
MBD3-202ENST00000434436 TESK2Q96S53 571 aa32.53■■■□□ 2.8
MBD3-202ENST00000434436 POGZQ7Z3K3 1410 aa32.53■■■□□ 2.8
MBD3-202ENST00000434436 COL17A1Q9UMD9 1497 aaPredicted RBP32.52■■■□□ 2.8
MBD3-202ENST00000434436 NEFLP07196 543 aa32.5■■■□□ 2.79
MBD3-202ENST00000434436 EFCAB6Q5THR3 1501 aa32.48■■■□□ 2.79
MBD3-202ENST00000434436 BCANQ96GW7 911 aa32.48■■■□□ 2.79
MBD3-202ENST00000434436 DISP3Q9P2K9 1392 aa32.47■■■□□ 2.79
MBD3-202ENST00000434436 MLH3Q9UHC1 1453 aa32.47■■■□□ 2.79
MBD3-202ENST00000434436 ZBED9Q6R2W3 1325 aa32.46■■■□□ 2.79
MBD3-202ENST00000434436 PPRC1Q5VV67 1664 aaKnown RBP32.46■■■□□ 2.79
MBD3-202ENST00000434436 NEURL4Q96JN8 1562 aa32.45■■■□□ 2.79
MBD3-202ENST00000434436 IQGAP1P46940 1657 aa32.44■■■□□ 2.78
MBD3-202ENST00000434436 FRMPD1Q5SYB0 1578 aa32.44■■■□□ 2.78
MBD3-202ENST00000434436 HECW2Q9P2P5 1572 aa32.44■■■□□ 2.78
MBD3-202ENST00000434436 LMTK2Q8IWU2 1503 aa32.44■■■□□ 2.78
MBD3-202ENST00000434436 STAC3Q96MF2 364 aa32.44■■■□□ 2.78
MBD3-202ENST00000434436 UGGT1Q9NYU2 1555 aa32.43■■■□□ 2.78
MBD3-202ENST00000434436 KTN1Q86UP2 1357 aaKnown RBP32.41■■■□□ 2.78
MBD3-202ENST00000434436 NEO1Q92859 1461 aa32.38■■■□□ 2.77
MBD3-202ENST00000434436 KIF1BO60333 1816 aa32.38■■■□□ 2.77
MBD3-202ENST00000434436 RALBP1Q15311 655 aa32.38■■■□□ 2.77
MBD3-202ENST00000434436 ABCA6Q8N139 1617 aa32.38■■■□□ 2.77
MBD3-202ENST00000434436 PER1O15534 1290 aaPredicted RBP32.37■■■□□ 2.77
MBD3-202ENST00000434436 TMF1P82094 1093 aa32.36■■■□□ 2.77
MBD3-202ENST00000434436 PNISRQ8TF01 805 aaKnown RBP32.36■■■□□ 2.77
MBD3-202ENST00000434436 MYBBP1AQ9BQG0 1328 aaKnown RBP32.35■■■□□ 2.77
MBD3-202ENST00000434436 KIAA1210Q9ULL0 1709 aa32.34■■■□□ 2.77
MBD3-202ENST00000434436 TMC1Q8TDI8 760 aa32.34■■■□□ 2.77
MBD3-202ENST00000434436 BRD4O60885 1362 aaPredicted RBP32.32■■■□□ 2.76
MBD3-202ENST00000434436 SCAF11Q99590 1463 aaKnown RBP32.32■■■□□ 2.76
MBD3-202ENST00000434436 MROH2AA6NES4 1674 aa32.32■■■□□ 2.76
MBD3-202ENST00000434436 IFT172Q9UG01 1749 aa32.31■■■□□ 2.76
MBD3-202ENST00000434436 PARD3Q8TEW0 1356 aa32.31■■■□□ 2.76
MBD3-202ENST00000434436 MAP3K4Q9Y6R4 1608 aa32.31■■■□□ 2.76
MBD3-202ENST00000434436 MYOM2P54296 1465 aa32.3■■■□□ 2.76
MBD3-202ENST00000434436 RAPGEF3O95398 923 aa32.29■■■□□ 2.76
MBD3-202ENST00000434436 NPATQ14207 1427 aa32.26■■■□□ 2.76
MBD3-202ENST00000434436 GGT6Q6P531 493 aa32.26■■■□□ 2.76
MBD3-202ENST00000434436 CFAP65Q6ZU64 1925 aaKnown RBP32.26■■■□□ 2.75
MBD3-202ENST00000434436 PANK3Q9H999 370 aa32.26■■■□□ 2.75
MBD3-202ENST00000434436 LRPPRCP42704 1394 aaKnown RBP32.25■■■□□ 2.75
MBD3-202ENST00000434436 RICTORQ6R327 1708 aa32.24■■■□□ 2.75
MBD3-202ENST00000434436 ADGRF5Q8IZF2 1346 aa32.23■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms