RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 FAM212AQ96EL1 285 aa8.11□□□□□ -1.11
RFC3-202ENST00000434425 UGGT2Q9NYU1 1516 aa8.1□□□□□ -1.11
RFC3-202ENST00000434425 RAPGEF2Q9Y4G8 1499 aa8.09□□□□□ -1.11
RFC3-202ENST00000434425 RSPH4AQ5TD94 716 aa8.09□□□□□ -1.11
RFC3-202ENST00000434425 CD109Q6YHK3 1445 aa8.09□□□□□ -1.11
RFC3-202ENST00000434425 WDR7Q9Y4E6 1490 aa8.08□□□□□ -1.12
RFC3-202ENST00000434425 KIAA0556O60303 1618 aa8.08□□□□□ -1.12
RFC3-202ENST00000434425 PYGBP11216 843 aa8.08□□□□□ -1.12
RFC3-202ENST00000434425 BCL11BQ9C0K0 894 aaPredicted RBP8.08□□□□□ -1.12
RFC3-202ENST00000434425 GTPBP6O43824 516 aaPredicted RBP8.07□□□□□ -1.12
RFC3-202ENST00000434425 BRPF1P55201 1214 aaPredicted RBP8.07□□□□□ -1.12
RFC3-202ENST00000434425 MAGI3Q5TCQ9 1506 aa8.07□□□□□ -1.12
RFC3-202ENST00000434425 STK25O00506 426 aa8.06□□□□□ -1.12
RFC3-202ENST00000434425 CHRM1P11229 460 aaPredicted RBP8.06□□□□□ -1.12
RFC3-202ENST00000434425 CHADLQ6NUI6 762 aa8.06□□□□□ -1.12
RFC3-202ENST00000434425 ARID3CA6NKF2 412 aa8.06□□□□□ -1.12
RFC3-202ENST00000434425 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.06□□□□□ -1.12
RFC3-202ENST00000434425 RSPH6AQ9H0K4 717 aa8.06□□□□□ -1.12
RFC3-202ENST00000434425 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.05□□□□□ -1.12
RFC3-202ENST00000434425 VGFO15240 615 aaPredicted RBP8.05□□□□□ -1.12
RFC3-202ENST00000434425 FBXO41Q8TF61 875 aa8.05□□□□□ -1.12
RFC3-202ENST00000434425 ZFP91Q96JP5 570 aaPredicted RBP8.05□□□□□ -1.12
RFC3-202ENST00000434425 ZMYND15Q9H091 742 aa8.05□□□□□ -1.12
RFC3-202ENST00000434425 CFAP43Q8NDM7 1665 aa8.05□□□□□ -1.12
RFC3-202ENST00000434425 KIF21BO75037 1637 aa8.04□□□□□ -1.12
RFC3-202ENST00000434425 ABCA8O94911 1581 aa8.03□□□□□ -1.12
RFC3-202ENST00000434425 RAPGEF3O95398 923 aa8.03□□□□□ -1.12
RFC3-202ENST00000434425 P3H3Q8IVL6 736 aa8.03□□□□□ -1.12
RFC3-202ENST00000434425 C1orf115Q9H7X2 142 aa8.02□□□□□ -1.13
RFC3-202ENST00000434425 CTTNBP2Q8WZ74 1663 aa8.02□□□□□ -1.13
RFC3-202ENST00000434425 ARAP3Q8WWN8 1544 aa8.01□□□□□ -1.13
RFC3-202ENST00000434425 RGS22Q8NE09 1264 aa8.01□□□□□ -1.13
RFC3-202ENST00000434425 STK24Q9Y6E0 443 aa8.01□□□□□ -1.13
RFC3-202ENST00000434425 GOLGA3Q08378 1498 aa8.01□□□□□ -1.13
RFC3-202ENST00000434425 PRKAR2AP13861 404 aaKnown RBP8□□□□□ -1.13
RFC3-202ENST00000434425 ZNF326Q5BKZ1 582 aaKnown RBP8□□□□□ -1.13
RFC3-202ENST00000434425 SGIP1Q9BQI5 828 aa8□□□□□ -1.13
RFC3-202ENST00000434425 ATP10BO94823 1461 aa8□□□□□ -1.13
RFC3-202ENST00000434425 PTPRMP28827 1452 aa8□□□□□ -1.13
RFC3-202ENST00000434425 TSPYL2Q9H2G4 693 aaPredicted RBP8□□□□□ -1.13
RFC3-202ENST00000434425 ADAMTSL3P82987 1691 aa7.99□□□□□ -1.13
RFC3-202ENST00000434425 POLR3GLQ9BT43 218 aa7.99□□□□□ -1.13
RFC3-202ENST00000434425 TICAM2Q86XR7 235 aa7.98□□□□□ -1.13
RFC3-202ENST00000434425 ARID3AQ99856 593 aa7.98□□□□□ -1.13
RFC3-202ENST00000434425 ARID4BQ4LE39 1312 aaPredicted RBP7.98□□□□□ -1.13
RFC3-202ENST00000434425 PHLDB1Q86UU1 1377 aa7.97□□□□□ -1.13
RFC3-202ENST00000434425 PRXQ9BXM0 1461 aa7.97□□□□□ -1.13
RFC3-202ENST00000434425 KCTD17Q8N5Z5 321 aa7.96□□□□□ -1.13
RFC3-202ENST00000434425 FARP1Q9Y4F1 1045 aaPredicted RBP7.96□□□□□ -1.13
RFC3-202ENST00000434425 ABCA9Q8IUA7 1624 aa7.96□□□□□ -1.14
RFC3-202ENST00000434425 BCORL1Q5H9F3 1711 aa7.95□□□□□ -1.14
RFC3-202ENST00000434425 HSPA2P54652 639 aa7.95□□□□□ -1.14
RFC3-202ENST00000434425 DCBLD2Q96PD2 775 aa7.95□□□□□ -1.14
RFC3-202ENST00000434425 CLCN6P51797 869 aa7.94□□□□□ -1.14
RFC3-202ENST00000434425 LMTK3Q96Q04 1460 aa7.94□□□□□ -1.14
RFC3-202ENST00000434425 MADDQ8WXG6 1647 aa7.94□□□□□ -1.14
RFC3-202ENST00000434425 RAD21O60216 631 aa7.94□□□□□ -1.14
RFC3-202ENST00000434425 PCF11O94913 1555 aaKnown RBP7.93□□□□□ -1.14
RFC3-202ENST00000434425 FRMPD1Q5SYB0 1578 aa7.93□□□□□ -1.14
RFC3-202ENST00000434425 NEO1Q92859 1461 aa7.93□□□□□ -1.14
RFC3-202ENST00000434425 PCDHB8Q9UN66 801 aa7.93□□□□□ -1.14
RFC3-202ENST00000434425 PCDHB13Q9Y5F0 798 aa7.93□□□□□ -1.14
RFC3-202ENST00000434425 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.92□□□□□ -1.14
RFC3-202ENST00000434425 RIMS1Q86UR5 1692 aaKnown RBP7.92□□□□□ -1.14
RFC3-202ENST00000434425 PLEKHD1A6NEE1 506 aa7.91□□□□□ -1.14
RFC3-202ENST00000434425 CC2D2BQ6DHV5 1058 aa7.91□□□□□ -1.14
RFC3-202ENST00000434425 CCDC61Q9Y6R9 512 aa7.91□□□□□ -1.14
RFC3-202ENST00000434425 RAPGEF6Q8TEU7 1601 aa7.91□□□□□ -1.14
RFC3-202ENST00000434425 CLSTN1O94985 981 aa7.9□□□□□ -1.14
RFC3-202ENST00000434425 MLECQ14165 292 aa7.9□□□□□ -1.14
RFC3-202ENST00000434425 CERKQ8TCT0 537 aa7.9□□□□□ -1.14
RFC3-202ENST00000434425 NUP153P49790 1475 aaKnown RBP7.9□□□□□ -1.15
RFC3-202ENST00000434425 AKNAQ7Z591 1439 aa7.9□□□□□ -1.15
RFC3-202ENST00000434425 SAMD9Q5K651 1589 aa7.89□□□□□ -1.15
RFC3-202ENST00000434425 CADPS2Q86UW7 1296 aa7.89□□□□□ -1.15
RFC3-202ENST00000434425 RICTORQ6R327 1708 aa7.89□□□□□ -1.15
RFC3-202ENST00000434425 SIGLEC1Q9BZZ2 1709 aa7.89□□□□□ -1.15
RFC3-202ENST00000434425 DENND4BO75064 1496 aaPredicted RBP7.89□□□□□ -1.15
RFC3-202ENST00000434425 LCE2DQ5TA82 110 aaPredicted RBP7.88□□□□□ -1.15
RFC3-202ENST00000434425 MTMR7Q9Y216 660 aa7.88□□□□□ -1.15
RFC3-202ENST00000434425 ZNF467Q7Z7K2 595 aaPredicted RBP7.87□□□□□ -1.15
RFC3-202ENST00000434425 ZNF592Q92610 1267 aa7.87□□□□□ -1.15
RFC3-202ENST00000434425 FHOD3Q2V2M9 1422 aa7.87□□□□□ -1.15
RFC3-202ENST00000434425 YEATS2Q9ULM3 1422 aa7.87□□□□□ -1.15
RFC3-202ENST00000434425 FANCAO15360 1455 aa7.87□□□□□ -1.15
RFC3-202ENST00000434425 PDAP1Q13442 181 aaKnown RBP7.87□□□□□ -1.15
RFC3-202ENST00000434425 CDAN1Q8IWY9 1227 aa7.87□□□□□ -1.15
RFC3-202ENST00000434425 FAM177A1Q8N128 213 aaPredicted RBP7.87□□□□□ -1.15
RFC3-202ENST00000434425 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.86□□□□□ -1.15
RFC3-202ENST00000434425 ARHGEF40Q8TER5 1519 aa7.86□□□□□ -1.15
RFC3-202ENST00000434425 POGZQ7Z3K3 1410 aa7.86□□□□□ -1.15
RFC3-202ENST00000434425 POTEB2H3BUK9 544 aa7.86□□□□□ -1.15
RFC3-202ENST00000434425 CEBPAP49715 358 aaPredicted RBP7.86□□□□□ -1.15
RFC3-202ENST00000434425 ILDR2Q71H61 639 aa7.86□□□□□ -1.15
RFC3-202ENST00000434425 ZNF428Q96B54 188 aa7.86□□□□□ -1.15
RFC3-202ENST00000434425 BRPF3Q9ULD4 1205 aa7.86□□□□□ -1.15
RFC3-202ENST00000434425 PSEN1P49768 467 aa7.85□□□□□ -1.15
RFC3-202ENST00000434425 PSMD1Q99460 953 aa7.85□□□□□ -1.15
RFC3-202ENST00000434425 HECW1Q76N89 1606 aa7.84□□□□□ -1.15
RFC3-202ENST00000434425 MMRN1Q13201 1228 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms