RNA–Protein interactions for RNA: ENST00000434411.5

SNHG20-202, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 1 (best) BASIC

Gene SNHG20, Length 2,143 nt, Biotype sense overlapping, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-202ENST00000434411 CCDC141Q6ZP82 1450 aa17.45■□□□□ 0.38
SNHG20-202ENST00000434411 A2MP01023 1474 aa17.44■□□□□ 0.38
SNHG20-202ENST00000434411 ARHGEF5Q12774 1597 aa17.44■□□□□ 0.38
SNHG20-202ENST00000434411 NEUROD1Q13562 356 aa17.44■□□□□ 0.38
SNHG20-202ENST00000434411 MYOM3Q5VTT5 1437 aa17.43■□□□□ 0.38
SNHG20-202ENST00000434411 MIA2Q96PC5 1412 aa17.43■□□□□ 0.38
SNHG20-202ENST00000434411 PLXNC1O60486 1568 aa17.42■□□□□ 0.38
SNHG20-202ENST00000434411 DHX57Q6P158 1386 aaKnown RBP17.41■□□□□ 0.38
SNHG20-202ENST00000434411 TSPY4P0CV99 314 aa17.41■□□□□ 0.38
SNHG20-202ENST00000434411 TSPY10P0CW01 314 aa17.41■□□□□ 0.38
SNHG20-202ENST00000434411 C3P01024 1663 aa17.41■□□□□ 0.38
SNHG20-202ENST00000434411 SETD1BQ9UPS6 1966 aaKnown RBP17.4■□□□□ 0.38
SNHG20-202ENST00000434411 PREX1Q8TCU6 1659 aa17.4■□□□□ 0.38
SNHG20-202ENST00000434411 CNTLNQ9NXG0 1405 aa17.39■□□□□ 0.38
SNHG20-202ENST00000434411 LMTK3Q96Q04 1460 aa17.38■□□□□ 0.37
SNHG20-202ENST00000434411 MROH2AA6NES4 1674 aa17.38■□□□□ 0.37
SNHG20-202ENST00000434411 ITGAEP38570 1179 aa17.38■□□□□ 0.37
SNHG20-202ENST00000434411 FAM50AQ14320 339 aaKnown RBP17.38■□□□□ 0.37
SNHG20-202ENST00000434411 FGD6Q6ZV73 1430 aa17.38■□□□□ 0.37
SNHG20-202ENST00000434411 CEBPAP49715 358 aaPredicted RBP17.37■□□□□ 0.37
SNHG20-202ENST00000434411 SETD5Q9C0A6 1442 aa17.36■□□□□ 0.37
SNHG20-202ENST00000434411 DHX29Q7Z478 1369 aaKnown RBP17.36■□□□□ 0.37
SNHG20-202ENST00000434411 CLTCQ00610 1675 aaKnown RBP17.36■□□□□ 0.37
SNHG20-202ENST00000434411 PTPN23Q9H3S7 1636 aa17.35■□□□□ 0.37
SNHG20-202ENST00000434411 MAST1Q9Y2H9 1570 aa17.35■□□□□ 0.37
SNHG20-202ENST00000434411 GGT6Q6P531 493 aa17.35■□□□□ 0.37
SNHG20-202ENST00000434411 RAB3GAP2Q9H2M9 1393 aa17.34■□□□□ 0.37
SNHG20-202ENST00000434411 PDIA4P13667 645 aaKnown RBP17.33■□□□□ 0.37
SNHG20-202ENST00000434411 PPP6R1Q9UPN7 881 aa17.33■□□□□ 0.37
SNHG20-202ENST00000434411 CROCC2H7BZ55 1655 aa17.31■□□□□ 0.36
SNHG20-202ENST00000434411 KIF3BO15066 747 aa17.3■□□□□ 0.36
SNHG20-202ENST00000434411 ZMYM3Q14202 1370 aa17.3■□□□□ 0.36
SNHG20-202ENST00000434411 UHRF1BP1Q6BDS2 1440 aa17.3■□□□□ 0.36
SNHG20-202ENST00000434411 HSPA2P54652 639 aa17.28■□□□□ 0.36
SNHG20-202ENST00000434411 DNMT1P26358 1616 aaKnown RBP17.28■□□□□ 0.36
SNHG20-202ENST00000434411 TCOF1Q13428 1488 aaKnown RBP17.28■□□□□ 0.36
SNHG20-202ENST00000434411 EIF2AK4Q9P2K8 1649 aaKnown RBP17.26■□□□□ 0.35
SNHG20-202ENST00000434411 FAM135AQ9P2D6 1515 aa17.26■□□□□ 0.35
SNHG20-202ENST00000434411 NPATQ14207 1427 aa17.26■□□□□ 0.35
SNHG20-202ENST00000434411 SHANK2Q9UPX8 1470 aa17.26■□□□□ 0.35
SNHG20-202ENST00000434411 ABCC5O15440 1437 aa17.24■□□□□ 0.35
SNHG20-202ENST00000434411 DAPK1P53355 1430 aa17.24■□□□□ 0.35
SNHG20-202ENST00000434411 DUOX2Q9NRD8 1548 aa17.24■□□□□ 0.35
SNHG20-202ENST00000434411 KDM5DQ9BY66 1539 aa17.23■□□□□ 0.35
SNHG20-202ENST00000434411 SALL2Q9Y467 1007 aaPredicted RBP17.23■□□□□ 0.35
SNHG20-202ENST00000434411 RNF17Q9BXT8 1623 aaKnown RBP17.23■□□□□ 0.35
SNHG20-202ENST00000434411 PDE4CQ08493 712 aa17.22■□□□□ 0.35
SNHG20-202ENST00000434411 WASHC2CQ9Y4E1 1318 aa17.22■□□□□ 0.35
SNHG20-202ENST00000434411 MIER1Q8N108 512 aa17.21■□□□□ 0.35
SNHG20-202ENST00000434411 HFM1A2PYH4 1435 aa17.21■□□□□ 0.34
SNHG20-202ENST00000434411 ZC3H13Q5T200 1668 aaKnown RBP17.2■□□□□ 0.34
SNHG20-202ENST00000434411 PTPRKQ15262 1439 aa17.2■□□□□ 0.34
SNHG20-202ENST00000434411 YTHDC1Q96MU7 727 aaKnown RBP17.19■□□□□ 0.34
SNHG20-202ENST00000434411 MYO3AQ8NEV4 1616 aa17.19■□□□□ 0.34
SNHG20-202ENST00000434411 STRCQ7RTU9 1775 aa17.19■□□□□ 0.34
SNHG20-202ENST00000434411 KIF15Q9NS87 1388 aa17.19■□□□□ 0.34
SNHG20-202ENST00000434411 NEFLP07196 543 aa17.18■□□□□ 0.34
SNHG20-202ENST00000434411 RRP7BPQ9NSQ0 103 aa17.18■□□□□ 0.34
SNHG20-202ENST00000434411 ZNF142P52746 1687 aaPredicted RBP17.18■□□□□ 0.34
SNHG20-202ENST00000434411 ANKRD30AQ9BXX3 1397 aa17.17■□□□□ 0.34
SNHG20-202ENST00000434411 ERBINQ96RT1 1412 aa17.17■□□□□ 0.34
SNHG20-202ENST00000434411 DMRT2Q9Y5R5 561 aa17.17■□□□□ 0.34
SNHG20-202ENST00000434411 GCC2Q8IWJ2 1684 aa17.16■□□□□ 0.34
SNHG20-202ENST00000434411 CHIC2Q9UKJ5 165 aa17.16■□□□□ 0.34
SNHG20-202ENST00000434411 PZPP20742 1482 aa17.15■□□□□ 0.34
SNHG20-202ENST00000434411 CEP152O94986 1710 aa17.15■□□□□ 0.34
SNHG20-202ENST00000434411 CEP170BQ9Y4F5 1589 aaPredicted RBP17.14■□□□□ 0.33
SNHG20-202ENST00000434411 TULP1O00294 542 aaPredicted RBP17.14■□□□□ 0.33
SNHG20-202ENST00000434411 MROH1Q8NDA8 1641 aa17.14■□□□□ 0.33
SNHG20-202ENST00000434411 ABCC3O15438 1527 aa17.13■□□□□ 0.33
SNHG20-202ENST00000434411 CFAP65Q6ZU64 1925 aaKnown RBP17.12■□□□□ 0.33
SNHG20-202ENST00000434411 CAMSAP1Q5T5Y3 1602 aa17.12■□□□□ 0.33
SNHG20-202ENST00000434411 NCOA1Q15788 1441 aa17.12■□□□□ 0.33
SNHG20-202ENST00000434411 CCDC136Q96JN2 1154 aa17.12■□□□□ 0.33
SNHG20-202ENST00000434411 ADGRL2O95490 1459 aa17.12■□□□□ 0.33
SNHG20-202ENST00000434411 DEPDC5O75140 1603 aa17.11■□□□□ 0.33
SNHG20-202ENST00000434411 FBXO31Q5XUX0 539 aaPredicted RBP17.11■□□□□ 0.33
SNHG20-202ENST00000434411 PRDM15P57071 1507 aaPredicted RBP17.11■□□□□ 0.33
SNHG20-202ENST00000434411 NAIPQ13075 1403 aa17.1■□□□□ 0.33
SNHG20-202ENST00000434411 TNRQ92752 1358 aa17.1■□□□□ 0.33
SNHG20-202ENST00000434411 HOMEZQ8IX15 550 aa17.1■□□□□ 0.33
SNHG20-202ENST00000434411 A2ML1A8K2U0 1454 aa17.09■□□□□ 0.33
SNHG20-202ENST00000434411 KANK1Q14678 1352 aa17.09■□□□□ 0.33
SNHG20-202ENST00000434411 PTPRTO14522 1441 aa17.07■□□□□ 0.32
SNHG20-202ENST00000434411 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.07■□□□□ 0.322e-7■■□□□ 13.1
SNHG20-202ENST00000434411 PLA2R1Q13018 1463 aa17.06■□□□□ 0.32
SNHG20-202ENST00000434411 NLRP1Q9C000 1473 aa17.06■□□□□ 0.32
SNHG20-202ENST00000434411 SPATA31D1Q6ZQQ2 1576 aa17.05■□□□□ 0.32
SNHG20-202ENST00000434411 ILDR1Q86SU0 546 aaPredicted RBP17.05■□□□□ 0.32
SNHG20-202ENST00000434411 PKD2Q13563 968 aa17.04■□□□□ 0.32
SNHG20-202ENST00000434411 POLR1AO95602 1720 aaPredicted RBP17.03■□□□□ 0.32
SNHG20-202ENST00000434411 ANKRD50Q9ULJ7 1429 aa17.03■□□□□ 0.32
SNHG20-202ENST00000434411 ARHGAP31Q2M1Z3 1444 aa17.03■□□□□ 0.32
SNHG20-202ENST00000434411 ERVK-7P63135 1459 aa17.03■□□□□ 0.32
SNHG20-202ENST00000434411 UGGT1Q9NYU2 1555 aa17.02■□□□□ 0.32
SNHG20-202ENST00000434411 ROCK1Q13464 1354 aa17.02■□□□□ 0.32
SNHG20-202ENST00000434411 THEMISQ8N1K5 641 aaPredicted RBP17.02■□□□□ 0.31
SNHG20-202ENST00000434411 NCKAP5LQ9HCH0 1330 aa17.01■□□□□ 0.31
SNHG20-202ENST00000434411 VWDEQ8N2E2 1590 aa17.01■□□□□ 0.31
SNHG20-202ENST00000434411 LMTK2Q8IWU2 1503 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms