RNA–Protein interactions for RNA: ENST00000428104.2

PDE6D-203, Transcript of phosphodiesterase 6D, humanhuman

TSL 3

Gene PDE6D, Length 627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-203ENST00000428104 GPATCH8Q9UKJ3 1502 aaKnown RBP23.85■■□□□ 1.41
PDE6D-203ENST00000428104 CASKIN1Q8WXD9 1431 aa23.84■■□□□ 1.41
PDE6D-203ENST00000428104 NPHP4O75161 1426 aaPredicted RBP23.83■■□□□ 1.4
PDE6D-203ENST00000428104 KIAA1107Q9UPP5 1409 aa23.83■■□□□ 1.4
PDE6D-203ENST00000428104 LRRC7Q96NW7 1537 aa23.8■■□□□ 1.4
PDE6D-203ENST00000428104 MED14O60244 1454 aa23.79■■□□□ 1.4
PDE6D-203ENST00000428104 PLEKHH2Q8IVE3 1493 aa23.79■■□□□ 1.4
PDE6D-203ENST00000428104 THEMISQ8N1K5 641 aaPredicted RBP23.78■■□□□ 1.4
PDE6D-203ENST00000428104 CFDP1Q9UEE9 299 aaPredicted RBP23.78■■□□□ 1.4
PDE6D-203ENST00000428104 PZPP20742 1482 aa23.76■■□□□ 1.39
PDE6D-203ENST00000428104 POTEAQ6S8J7 498 aa23.76■■□□□ 1.39
PDE6D-203ENST00000428104 RNF17Q9BXT8 1623 aaKnown RBP23.75■■□□□ 1.39
PDE6D-203ENST00000428104 ADGBQ8N7X0 1667 aa23.74■■□□□ 1.39
PDE6D-203ENST00000428104 UGGT1Q9NYU2 1555 aa23.73■■□□□ 1.39
PDE6D-203ENST00000428104 DEPDC5O75140 1603 aa23.73■■□□□ 1.39
PDE6D-203ENST00000428104 STRCP1A6NGW2 1772 aa23.73■■□□□ 1.39
PDE6D-203ENST00000428104 MIA2Q96PC5 1412 aa23.72■■□□□ 1.39
PDE6D-203ENST00000428104 FAM135AQ9P2D6 1515 aa23.72■■□□□ 1.39
PDE6D-203ENST00000428104 DHX29Q7Z478 1369 aaKnown RBP23.71■■□□□ 1.39
PDE6D-203ENST00000428104 NLRP1Q9C000 1473 aa23.7■■□□□ 1.38
PDE6D-203ENST00000428104 CCNB3Q8WWL7 1395 aa23.7■■□□□ 1.38
PDE6D-203ENST00000428104 ZNF644Q9H582 1327 aaPredicted RBP23.7■■□□□ 1.38
PDE6D-203ENST00000428104 KIF3BO15066 747 aa23.7■■□□□ 1.38
PDE6D-203ENST00000428104 IQGAP1P46940 1657 aa23.7■■□□□ 1.38
PDE6D-203ENST00000428104 KDM5DQ9BY66 1539 aa23.69■■□□□ 1.38
PDE6D-203ENST00000428104 WASHC2CQ9Y4E1 1318 aa23.68■■□□□ 1.38
PDE6D-203ENST00000428104 SYNMO15061 1565 aa23.68■■□□□ 1.38
PDE6D-203ENST00000428104 FYCO1Q9BQS8 1478 aa23.67■■□□□ 1.38
PDE6D-203ENST00000428104 MBD5Q9P267 1494 aa23.65■■□□□ 1.38
PDE6D-203ENST00000428104 RTEL1-TNFRSF6BF6WH68 1400 aa23.64■■□□□ 1.37
PDE6D-203ENST00000428104 SETD1AO15047 1707 aaKnown RBP23.57■■□□□ 1.36
PDE6D-203ENST00000428104 FAM135BQ49AJ0 1406 aa23.56■■□□□ 1.36
PDE6D-203ENST00000428104 ZC3H13Q5T200 1668 aaKnown RBP23.54■■□□□ 1.36
PDE6D-203ENST00000428104 MTUS2Q5JR59 1369 aa23.54■■□□□ 1.36
PDE6D-203ENST00000428104 CHIC1Q5VXU3 224 aa23.53■■□□□ 1.36
PDE6D-203ENST00000428104 TIAM1Q13009 1591 aa23.52■■□□□ 1.36
PDE6D-203ENST00000428104 SCAF11Q99590 1463 aaKnown RBP23.51■■□□□ 1.35
PDE6D-203ENST00000428104 LTKP29376 864 aa23.49■■□□□ 1.35
PDE6D-203ENST00000428104 SRCAPQ6ZRS2 3230 aa23.49■■□□□ 1.35
PDE6D-203ENST00000428104 XIRP1Q702N8 1843 aaKnown RBP23.48■■□□□ 1.35
PDE6D-203ENST00000428104 ERVK-7P63135 1459 aa23.48■■□□□ 1.35
PDE6D-203ENST00000428104 CCDC141Q6ZP82 1450 aa23.48■■□□□ 1.35
PDE6D-203ENST00000428104 ABCC3O15438 1527 aa23.45■■□□□ 1.34
PDE6D-203ENST00000428104 TXNDC2Q86VQ3 553 aa23.45■■□□□ 1.34
PDE6D-203ENST00000428104 NCOA2Q15596 1464 aa23.44■■□□□ 1.34
PDE6D-203ENST00000428104 TMEM94Q12767 1356 aa23.44■■□□□ 1.34
PDE6D-203ENST00000428104 UPF1Q92900 1129 aaKnown RBP eCLIP23.44■■□□□ 1.34
PDE6D-203ENST00000428104 ROBO1Q9Y6N7 1651 aa23.42■■□□□ 1.34
PDE6D-203ENST00000428104 ARHGAP23Q9P227 1491 aa23.42■■□□□ 1.34
PDE6D-203ENST00000428104 UBR1Q8IWV7 1749 aa23.42■■□□□ 1.34
PDE6D-203ENST00000428104 RBM33Q96EV2 1170 aaKnown RBP23.4■■□□□ 1.34
PDE6D-203ENST00000428104 CAMSAP2Q08AD1 1489 aa23.39■■□□□ 1.34
PDE6D-203ENST00000428104 SLIT1O75093 1534 aa23.38■■□□□ 1.33
PDE6D-203ENST00000428104 CEP162Q5TB80 1403 aa23.37■■□□□ 1.33
PDE6D-203ENST00000428104 EHBP1L1Q8N3D4 1523 aa23.37■■□□□ 1.33
PDE6D-203ENST00000428104 EID1Q9Y6B2 187 aa23.36■■□□□ 1.33
PDE6D-203ENST00000428104 MAP3K1Q13233 1512 aa23.35■■□□□ 1.33
PDE6D-203ENST00000428104 RSPH4AQ5TD94 716 aa23.35■■□□□ 1.33
PDE6D-203ENST00000428104 TRIM52Q96A61 297 aa23.35■■□□□ 1.33
PDE6D-203ENST00000428104 JCADQ9P266 1359 aa23.35■■□□□ 1.33
PDE6D-203ENST00000428104 PROSER2Q86WR7 435 aaPredicted RBP23.33■■□□□ 1.33
PDE6D-203ENST00000428104 LRRC9Q6ZRR7 1453 aa23.32■■□□□ 1.32
PDE6D-203ENST00000428104 TSPY4P0CV99 314 aa23.32■■□□□ 1.32
PDE6D-203ENST00000428104 TSPY10P0CW01 314 aa23.32■■□□□ 1.32
PDE6D-203ENST00000428104 KCNA6P17658 529 aa23.31■■□□□ 1.32
PDE6D-203ENST00000428104 MROH1Q8NDA8 1641 aa23.29■■□□□ 1.32
PDE6D-203ENST00000428104 TMEM2Q9UHN6 1383 aa23.28■■□□□ 1.32
PDE6D-203ENST00000428104 SLC26A8Q96RN1 970 aa23.28■■□□□ 1.32
PDE6D-203ENST00000428104 LRP6O75581 1613 aa23.28■■□□□ 1.32
PDE6D-203ENST00000428104 ARHGEF5Q12774 1597 aa23.27■■□□□ 1.32
PDE6D-203ENST00000428104 SLAIN2Q9P270 581 aa23.27■■□□□ 1.32
PDE6D-203ENST00000428104 PHLPP1O60346 1717 aa23.27■■□□□ 1.32
PDE6D-203ENST00000428104 CEP152O94986 1710 aa23.25■■□□□ 1.31
PDE6D-203ENST00000428104 PRDM15P57071 1507 aaPredicted RBP23.25■■□□□ 1.31
PDE6D-203ENST00000428104 MEX3CQ5U5Q3 659 aaKnown RBP23.25■■□□□ 1.31
PDE6D-203ENST00000428104 ZNF772Q68DY9 489 aaPredicted RBP23.25■■□□□ 1.31
PDE6D-203ENST00000428104 MSH6P52701 1360 aa23.24■■□□□ 1.31
PDE6D-203ENST00000428104 CFAP65Q6ZU64 1925 aaKnown RBP23.23■■□□□ 1.31
PDE6D-203ENST00000428104 STAG3Q9UJ98 1225 aa23.22■■□□□ 1.31
PDE6D-203ENST00000428104 EIF2AK4Q9P2K8 1649 aaKnown RBP23.22■■□□□ 1.31
PDE6D-203ENST00000428104 PIK3C2BO00750 1634 aa23.21■■□□□ 1.31
PDE6D-203ENST00000428104 COL16A1Q07092 1604 aaPredicted RBP23.21■■□□□ 1.31
PDE6D-203ENST00000428104 NKTRP30414 1462 aaKnown RBP23.2■■□□□ 1.3
PDE6D-203ENST00000428104 SPATA31A6Q5VVP1 1343 aa23.2■■□□□ 1.3
PDE6D-203ENST00000428104 ARHGAP31Q2M1Z3 1444 aa23.19■■□□□ 1.3
PDE6D-203ENST00000428104 RXRBP28702 533 aa23.19■■□□□ 1.3
PDE6D-203ENST00000428104 TET3O43151 1660 aa23.19■■□□□ 1.3
PDE6D-203ENST00000428104 NWD1Q149M9 1564 aa23.17■■□□□ 1.3
PDE6D-203ENST00000428104 MAST1Q9Y2H9 1570 aa23.17■■□□□ 1.3
PDE6D-203ENST00000428104 EFCAB6Q5THR3 1501 aa23.16■■□□□ 1.3
PDE6D-203ENST00000428104 FGD6Q6ZV73 1430 aa23.16■■□□□ 1.3
PDE6D-203ENST00000428104 IDI1Q13907 227 aa23.13■■□□□ 1.29
PDE6D-203ENST00000428104 CDK12Q9NYV4 1490 aaPredicted RBP23.11■■□□□ 1.29
PDE6D-203ENST00000428104 BCANQ96GW7 911 aa23.11■■□□□ 1.29
PDE6D-203ENST00000428104 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.1■■□□□ 1.29
PDE6D-203ENST00000428104 DUOX2Q9NRD8 1548 aa23.09■■□□□ 1.29
PDE6D-203ENST00000428104 NUTM2BA6NNL0 878 aaPredicted RBP23.08■■□□□ 1.29
PDE6D-203ENST00000428104 NUTM2EB1AL46 878 aaPredicted RBP23.08■■□□□ 1.29
PDE6D-203ENST00000428104 NUTM2AQ8IVF1 878 aaPredicted RBP23.08■■□□□ 1.29
PDE6D-203ENST00000428104 KDM5AP29375 1690 aaKnown RBP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms