RNA–Protein interactions for RNA: ENST00000428104.2

PDE6D-203, Transcript of phosphodiesterase 6D, humanhuman

TSL 3

Gene PDE6D, Length 627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-203ENST00000428104 NISCHQ9Y2I1 1504 aa37.26■■■■□ 3.55
PDE6D-203ENST00000428104 ABCC9O60706 1549 aa34.76■■■■□ 3.15
PDE6D-203ENST00000428104 CCDC180Q9P1Z9 1646 aa33.71■■■□□ 2.99
PDE6D-203ENST00000428104 DNAJC5BQ9UF47 199 aa33.45■■■□□ 2.95
PDE6D-203ENST00000428104 RB1CC1Q8TDY2 1594 aa32.58■■■□□ 2.81
PDE6D-203ENST00000428104 PABPN1Q86U42 306 aaKnown RBP eCLIP32.26■■■□□ 2.75
PDE6D-203ENST00000428104 NACADO15069 1562 aa32.14■■■□□ 2.74
PDE6D-203ENST00000428104 DCAF8L2P0C7V8 631 aa31.93■■■□□ 2.7
PDE6D-203ENST00000428104 UNC13AQ9UPW8 1703 aa31.78■■■□□ 2.68
PDE6D-203ENST00000428104 BICRAQ9NZM4 1560 aa31.72■■■□□ 2.67
PDE6D-203ENST00000428104 CECR2Q9BXF3 1484 aa31.38■■■□□ 2.61
PDE6D-203ENST00000428104 MYO15BQ96JP2 1530 aa31.37■■■□□ 2.61
PDE6D-203ENST00000428104 DNAJC5Q9H3Z4 198 aa31.31■■■□□ 2.6
PDE6D-203ENST00000428104 CC2D2AQ9P2K1 1620 aa31.28■■■□□ 2.6
PDE6D-203ENST00000428104 SHROOM4Q9ULL8 1493 aa31.12■■■□□ 2.57
PDE6D-203ENST00000428104 EIF4G1Q04637 1599 aaKnown RBP31■■■□□ 2.55
PDE6D-203ENST00000428104 SCRIBQ14160 1630 aa30.78■■■□□ 2.52
PDE6D-203ENST00000428104 ZCCHC6Q5VYS8 1495 aaKnown RBP30.69■■■□□ 2.5
PDE6D-203ENST00000428104 DCAF1Q9Y4B6 1507 aa30.66■■■□□ 2.5
PDE6D-203ENST00000428104 CUX2O14529 1486 aa30.25■■■□□ 2.43
PDE6D-203ENST00000428104 ERCC6Q03468 1493 aa30.05■■■□□ 2.4
PDE6D-203ENST00000428104 NCAPD3P42695 1498 aa29.73■■■□□ 2.35
PDE6D-203ENST00000428104 TRIM41Q8WV44 630 aa29.63■■■□□ 2.33
PDE6D-203ENST00000428104 NESP48681 1621 aa29.6■■■□□ 2.33
PDE6D-203ENST00000428104 ATAD2BQ9ULI0 1458 aa29.54■■■□□ 2.32
PDE6D-203ENST00000428104 THOC2Q8NI27 1593 aaKnown RBP29.41■■■□□ 2.3
PDE6D-203ENST00000428104 HMGXB3Q12766 1538 aa29.4■■■□□ 2.3
PDE6D-203ENST00000428104 SMARCA2P51531 1590 aa29.35■■■□□ 2.29
PDE6D-203ENST00000428104 SMARCA4P51532 1647 aa29.23■■■□□ 2.27
PDE6D-203ENST00000428104 BAZ1BQ9UIG0 1483 aaKnown RBP29.19■■■□□ 2.26
PDE6D-203ENST00000428104 LAMC3Q9Y6N6 1575 aa29.15■■■□□ 2.26
PDE6D-203ENST00000428104 KIF21AQ7Z4S6 1674 aa29.09■■■□□ 2.25
PDE6D-203ENST00000428104 PDS5BQ9NTI5 1447 aa29.06■■■□□ 2.24
PDE6D-203ENST00000428104 BAZ1AQ9NRL2 1556 aaPredicted RBP28.95■■■□□ 2.22
PDE6D-203ENST00000428104 PEG3Q9GZU2 1588 aa28.92■■■□□ 2.22
PDE6D-203ENST00000428104 MRC2Q9UBG0 1479 aa28.88■■■□□ 2.21
PDE6D-203ENST00000428104 WDR62O43379 1518 aa28.81■■■□□ 2.2
PDE6D-203ENST00000428104 CADPSQ9ULU8 1353 aa28.8■■■□□ 2.2
PDE6D-203ENST00000428104 OSCARQ8IYS5 282 aa28.75■■■□□ 2.19
PDE6D-203ENST00000428104 MROH2BQ7Z745 1585 aa28.73■■■□□ 2.19
PDE6D-203ENST00000428104 CEP164Q9UPV0 1460 aa28.58■■■□□ 2.17
PDE6D-203ENST00000428104 FANCD2Q9BXW9 1451 aa28.48■■■□□ 2.15
PDE6D-203ENST00000428104 RIMBP3CA6NJZ7 1639 aa28.45■■■□□ 2.14
PDE6D-203ENST00000428104 RIMBP3BA6NNM3 1639 aa28.45■■■□□ 2.14
PDE6D-203ENST00000428104 RIMBP3Q9UFD9 1639 aa28.45■■■□□ 2.14
PDE6D-203ENST00000428104 URB2Q14146 1524 aaKnown RBP28.32■■■□□ 2.12
PDE6D-203ENST00000428104 WIZO95785 1651 aa28.3■■■□□ 2.12
PDE6D-203ENST00000428104 ARHGEF11O15085 1522 aa28.3■■■□□ 2.12
PDE6D-203ENST00000428104 CFTRP13569 1480 aa28.27■■■□□ 2.12
PDE6D-203ENST00000428104 CYB5RLQ6IPT4 315 aa28.19■■■□□ 2.1
PDE6D-203ENST00000428104 TRHP20396 242 aaPredicted RBP28.17■■■□□ 2.1
PDE6D-203ENST00000428104 ZNF608Q9ULD9 1512 aaPredicted RBP28.13■■■□□ 2.09
PDE6D-203ENST00000428104 IFT140Q96RY7 1462 aa28.02■■■□□ 2.08
PDE6D-203ENST00000428104 ARAP1Q96P48 1450 aa27.99■■■□□ 2.07
PDE6D-203ENST00000428104 AEBP2Q6ZN18 517 aaPredicted RBP27.98■■■□□ 2.07
PDE6D-203ENST00000428104 TOP2AP11388 1531 aaKnown RBP27.87■■■□□ 2.05
PDE6D-203ENST00000428104 EIF4G3O43432 1585 aaKnown RBP27.86■■■□□ 2.05
PDE6D-203ENST00000428104 TOPBP1Q92547 1522 aa27.83■■■□□ 2.05
PDE6D-203ENST00000428104 RSF1Q96T23 1441 aaPredicted RBP27.82■■■□□ 2.04
PDE6D-203ENST00000428104 CHD1O14646 1710 aa27.78■■■□□ 2.04
PDE6D-203ENST00000428104 FBLN2P98095 1184 aa27.78■■■□□ 2.04
PDE6D-203ENST00000428104 AQRO60306 1485 aaKnown RBP eCLIP27.77■■■□□ 2.04
PDE6D-203ENST00000428104 PRDM2Q13029 1718 aa27.75■■■□□ 2.03
PDE6D-203ENST00000428104 ABCC8Q09428 1581 aa27.64■■■□□ 2.01
PDE6D-203ENST00000428104 TARBP1Q13395 1621 aaKnown RBP27.63■■■□□ 2.01
PDE6D-203ENST00000428104 CCDC88BA6NC98 1476 aa27.62■■■□□ 2.01
PDE6D-203ENST00000428104 DNMBPQ6XZF7 1577 aa27.61■■■□□ 2.01
PDE6D-203ENST00000428104 POLA1P09884 1462 aaPredicted RBP27.51■■□□□ 1.99
PDE6D-203ENST00000428104 CLASP1Q7Z460 1538 aa27.5■■□□□ 1.99
PDE6D-203ENST00000428104 TDRD9Q8NDG6 1382 aaKnown RBP27.47■■□□□ 1.99
PDE6D-203ENST00000428104 RAD54L2Q9Y4B4 1467 aa27.45■■□□□ 1.99
PDE6D-203ENST00000428104 SNAPC4Q5SXM2 1469 aa27.44■■□□□ 1.98
PDE6D-203ENST00000428104 CHMP7Q8WUX9 453 aaPredicted RBP27.4■■□□□ 1.98
PDE6D-203ENST00000428104 SYNJ1O43426 1573 aa27.36■■□□□ 1.97
PDE6D-203ENST00000428104 SOGA1O94964 1423 aa27.36■■□□□ 1.97
PDE6D-203ENST00000428104 GAPVD1Q14C86 1478 aa27.31■■□□□ 1.96
PDE6D-203ENST00000428104 MAGI1Q96QZ7 1491 aaPredicted RBP27.27■■□□□ 1.96
PDE6D-203ENST00000428104 SYNJ2O15056 1496 aa27.22■■□□□ 1.95
PDE6D-203ENST00000428104 GRIN2BQ13224 1484 aa27.21■■□□□ 1.95
PDE6D-203ENST00000428104 FGD5Q6ZNL6 1462 aa27.2■■□□□ 1.95
PDE6D-203ENST00000428104 WDR97A6NE52 1622 aa27.2■■□□□ 1.95
PDE6D-203ENST00000428104 ERCC6L2Q5T890 1561 aa27.06■■□□□ 1.92
PDE6D-203ENST00000428104 CUX1P39880 1505 aa27.04■■□□□ 1.92
PDE6D-203ENST00000428104 PBRM1Q86U86 1689 aa26.96■■□□□ 1.91
PDE6D-203ENST00000428104 ILDR1Q86SU0 546 aaPredicted RBP26.92■■□□□ 1.9
PDE6D-203ENST00000428104 CEP170Q5SW79 1584 aa26.89■■□□□ 1.9
PDE6D-203ENST00000428104 GRIN2AQ12879 1464 aa26.87■■□□□ 1.89
PDE6D-203ENST00000428104 KIF13AQ9H1H9 1805 aa26.85■■□□□ 1.89
PDE6D-203ENST00000428104 ABCA5Q8WWZ7 1642 aa26.83■■□□□ 1.89
PDE6D-203ENST00000428104 NUP160Q12769 1436 aa26.82■■□□□ 1.88
PDE6D-203ENST00000428104 ABCA10Q8WWZ4 1543 aa26.81■■□□□ 1.88
PDE6D-203ENST00000428104 KDM4FA0A1W2PPD8 638 aa26.79■■□□□ 1.88
PDE6D-203ENST00000428104 FAM69CQ0P6D2 419 aa26.74■■□□□ 1.87
PDE6D-203ENST00000428104 SHROOM2Q13796 1616 aa26.74■■□□□ 1.87
PDE6D-203ENST00000428104 ADAMTS12P58397 1594 aa26.71■■□□□ 1.87
PDE6D-203ENST00000428104 ABCC10Q5T3U5 1492 aa26.68■■□□□ 1.86
PDE6D-203ENST00000428104 PRG4Q92954 1404 aaPredicted RBP26.65■■□□□ 1.86
PDE6D-203ENST00000428104 FHAD1B1AJZ9 1412 aa26.62■■□□□ 1.85
PDE6D-203ENST00000428104 DIP2BQ9P265 1576 aa26.57■■□□□ 1.84
PDE6D-203ENST00000428104 KDM6BO15054 1643 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 178.6 ms