RNA–Protein interactions for RNA: ENST00000427778.1

LINC00963-204, long intergenic non-protein coding RNA 963, humanhuman

TSL 2

Gene LINC00963, Length 382 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-204ENST00000427778 MBD5Q9P267 1494 aa13.95□□□□□ -0.18
LINC00963-204ENST00000427778 ATP7AQ04656 1500 aa13.95□□□□□ -0.18
LINC00963-204ENST00000427778 CAMSAP2Q08AD1 1489 aa13.93□□□□□ -0.18
LINC00963-204ENST00000427778 ARHGEF5Q12774 1597 aa13.93□□□□□ -0.18
LINC00963-204ENST00000427778 PLXNC1O60486 1568 aa13.92□□□□□ -0.18
LINC00963-204ENST00000427778 MED1Q15648 1581 aaPredicted RBP13.92□□□□□ -0.18
LINC00963-204ENST00000427778 ADGBQ8N7X0 1667 aa13.92□□□□□ -0.18
LINC00963-204ENST00000427778 CEBPAP49715 358 aaPredicted RBP13.92□□□□□ -0.18
LINC00963-204ENST00000427778 SAMD1Q6SPF0 538 aaPredicted RBP13.92□□□□□ -0.18
LINC00963-204ENST00000427778 ZNF777Q9ULD5 760 aaPredicted RBP13.92□□□□□ -0.18
LINC00963-204ENST00000427778 MYOM3Q5VTT5 1437 aa13.91□□□□□ -0.18
LINC00963-204ENST00000427778 MIA2Q96PC5 1412 aa13.91□□□□□ -0.18
LINC00963-204ENST00000427778 HNRNPMP52272 730 aaKnown RBP eCLIP13.9□□□□□ -0.18
LINC00963-204ENST00000427778 KANK4Q5T7N3 995 aaPredicted RBP13.9□□□□□ -0.18
LINC00963-204ENST00000427778 CCDC141Q6ZP82 1450 aa13.9□□□□□ -0.18
LINC00963-204ENST00000427778 RTEL1-TNFRSF6BF6WH68 1400 aa13.9□□□□□ -0.19
LINC00963-204ENST00000427778 NCOA1Q15788 1441 aa13.9□□□□□ -0.19
LINC00963-204ENST00000427778 SPAG9O60271 1321 aaKnown RBP13.9□□□□□ -0.19
LINC00963-204ENST00000427778 ZNF644Q9H582 1327 aaPredicted RBP13.9□□□□□ -0.19
LINC00963-204ENST00000427778 MROH2AA6NES4 1674 aa13.89□□□□□ -0.19
LINC00963-204ENST00000427778 CAMSAP1Q5T5Y3 1602 aa13.89□□□□□ -0.19
LINC00963-204ENST00000427778 ZNF142P52746 1687 aaPredicted RBP13.88□□□□□ -0.19
LINC00963-204ENST00000427778 MAST1Q9Y2H9 1570 aa13.87□□□□□ -0.19
LINC00963-204ENST00000427778 RSPH4AQ5TD94 716 aa13.86□□□□□ -0.19
LINC00963-204ENST00000427778 MYO3AQ8NEV4 1616 aa13.85□□□□□ -0.19
LINC00963-204ENST00000427778 A2MP01023 1474 aa13.85□□□□□ -0.19
LINC00963-204ENST00000427778 CROCC2H7BZ55 1655 aa13.84□□□□□ -0.19
LINC00963-204ENST00000427778 PTPN23Q9H3S7 1636 aa13.83□□□□□ -0.2
LINC00963-204ENST00000427778 CHRDL2Q6WN34 429 aa13.83□□□□□ -0.2
LINC00963-204ENST00000427778 MYT1LQ9UL68 1186 aa13.83□□□□□ -0.2
LINC00963-204ENST00000427778 TCOF1Q13428 1488 aaKnown RBP13.82□□□□□ -0.2
LINC00963-204ENST00000427778 KCNA4P22459 653 aa13.82□□□□□ -0.2
LINC00963-204ENST00000427778 FGD6Q6ZV73 1430 aa13.81□□□□□ -0.2
LINC00963-204ENST00000427778 POLR1AO95602 1720 aaPredicted RBP13.81□□□□□ -0.2
LINC00963-204ENST00000427778 CNTLNQ9NXG0 1405 aa13.81□□□□□ -0.2
LINC00963-204ENST00000427778 SHANK2Q9UPX8 1470 aa13.8□□□□□ -0.2
LINC00963-204ENST00000427778 FAM135AQ9P2D6 1515 aa13.8□□□□□ -0.2
LINC00963-204ENST00000427778 DNMT1P26358 1616 aaKnown RBP13.8□□□□□ -0.2
LINC00963-204ENST00000427778 UBAP1LF5GYI3 381 aa13.8□□□□□ -0.2
LINC00963-204ENST00000427778 CLTCQ00610 1675 aaKnown RBP13.79□□□□□ -0.2
LINC00963-204ENST00000427778 DHX29Q7Z478 1369 aaKnown RBP13.78□□□□□ -0.2
LINC00963-204ENST00000427778 EIF2AK4Q9P2K8 1649 aaKnown RBP13.78□□□□□ -0.2
LINC00963-204ENST00000427778 ZNF335Q9H4Z2 1342 aaPredicted RBP13.77□□□□□ -0.21
LINC00963-204ENST00000427778 CEP170BQ9Y4F5 1589 aaPredicted RBP13.77□□□□□ -0.21
LINC00963-204ENST00000427778 RNF17Q9BXT8 1623 aaKnown RBP13.76□□□□□ -0.21
LINC00963-204ENST00000427778 PLA2R1Q13018 1463 aa13.76□□□□□ -0.21
LINC00963-204ENST00000427778 NPATQ14207 1427 aa13.76□□□□□ -0.21
LINC00963-204ENST00000427778 ESF1Q9H501 851 aaKnown RBP13.76□□□□□ -0.21
LINC00963-204ENST00000427778 TSPY4P0CV99 314 aa13.75□□□□□ -0.21
LINC00963-204ENST00000427778 TSPY10P0CW01 314 aa13.75□□□□□ -0.21
LINC00963-204ENST00000427778 ABCC5O15440 1437 aa13.74□□□□□ -0.21
LINC00963-204ENST00000427778 DAPK1P53355 1430 aa13.73□□□□□ -0.21
LINC00963-204ENST00000427778 DUOX2Q9NRD8 1548 aa13.73□□□□□ -0.21
LINC00963-204ENST00000427778 ZC3H13Q5T200 1668 aaKnown RBP13.72□□□□□ -0.21
LINC00963-204ENST00000427778 KDM5DQ9BY66 1539 aa13.71□□□□□ -0.21
LINC00963-204ENST00000427778 MROH1Q8NDA8 1641 aa13.7□□□□□ -0.22
LINC00963-204ENST00000427778 CPS1P31327 1500 aa13.69□□□□□ -0.22
LINC00963-204ENST00000427778 NCKAP5LQ9HCH0 1330 aa13.69□□□□□ -0.22
LINC00963-204ENST00000427778 ADGRL2O95490 1459 aa13.69□□□□□ -0.22
LINC00963-204ENST00000427778 DEPDC5O75140 1603 aa13.69□□□□□ -0.22
LINC00963-204ENST00000427778 ERBINQ96RT1 1412 aa13.69□□□□□ -0.22
LINC00963-204ENST00000427778 HSPA1LP34931 641 aa13.68□□□□□ -0.22
LINC00963-204ENST00000427778 PRDM15P57071 1507 aaPredicted RBP13.68□□□□□ -0.22
LINC00963-204ENST00000427778 ZMYM3Q14202 1370 aa13.68□□□□□ -0.22
LINC00963-204ENST00000427778 POLA2Q14181 598 aa13.67□□□□□ -0.22
LINC00963-204ENST00000427778 KIF15Q9NS87 1388 aa13.67□□□□□ -0.22
LINC00963-204ENST00000427778 NEURL4Q96JN8 1562 aa13.66□□□□□ -0.22
LINC00963-204ENST00000427778 PTPRKQ15262 1439 aa13.66□□□□□ -0.22
LINC00963-204ENST00000427778 KIF3BO15066 747 aa13.66□□□□□ -0.22
LINC00963-204ENST00000427778 PKD2Q13563 968 aa13.66□□□□□ -0.22
LINC00963-204ENST00000427778 GGT6Q6P531 493 aa13.66□□□□□ -0.22
LINC00963-204ENST00000427778 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.66□□□□□ -0.22
LINC00963-204ENST00000427778 ABCC3O15438 1527 aa13.65□□□□□ -0.22
LINC00963-204ENST00000427778 PZPP20742 1482 aa13.65□□□□□ -0.22
LINC00963-204ENST00000427778 ANKRD30AQ9BXX3 1397 aa13.64□□□□□ -0.23
LINC00963-204ENST00000427778 PIP4K2BP78356 416 aa13.64□□□□□ -0.23
LINC00963-204ENST00000427778 ALKQ9UM73 1620 aa13.64□□□□□ -0.23
LINC00963-204ENST00000427778 CEP152O94986 1710 aa13.63□□□□□ -0.23
LINC00963-204ENST00000427778 VWDEQ8N2E2 1590 aa13.62□□□□□ -0.23
LINC00963-204ENST00000427778 TOM1O60784 492 aa13.61□□□□□ -0.23
LINC00963-204ENST00000427778 SYNMO15061 1565 aa13.61□□□□□ -0.23
LINC00963-204ENST00000427778 A2ML1A8K2U0 1454 aa13.61□□□□□ -0.23
LINC00963-204ENST00000427778 RRBP1Q9P2E9 1410 aaKnown RBP13.6□□□□□ -0.23
LINC00963-204ENST00000427778 WASHC2CQ9Y4E1 1318 aa13.6□□□□□ -0.23
LINC00963-204ENST00000427778 ROCK1Q13464 1354 aa13.59□□□□□ -0.23
LINC00963-204ENST00000427778 STRCP1A6NGW2 1772 aa13.59□□□□□ -0.23
LINC00963-204ENST00000427778 FAM50AQ14320 339 aaKnown RBP13.59□□□□□ -0.23
LINC00963-204ENST00000427778 SP7Q8TDD2 431 aaPredicted RBP13.59□□□□□ -0.23
LINC00963-204ENST00000427778 LMTK2Q8IWU2 1503 aa13.59□□□□□ -0.23
LINC00963-204ENST00000427778 ARHGAP31Q2M1Z3 1444 aa13.58□□□□□ -0.24
LINC00963-204ENST00000427778 RRP7BPQ9NSQ0 103 aa13.58□□□□□ -0.24
LINC00963-204ENST00000427778 IQGAP1P46940 1657 aa13.58□□□□□ -0.24
LINC00963-204ENST00000427778 SETD1AO15047 1707 aaKnown RBP13.57□□□□□ -0.24
LINC00963-204ENST00000427778 UNC13BO14795 1591 aa13.56□□□□□ -0.24
LINC00963-204ENST00000427778 TNRQ92752 1358 aa13.56□□□□□ -0.24
LINC00963-204ENST00000427778 ANKRD50Q9ULJ7 1429 aa13.56□□□□□ -0.24
LINC00963-204ENST00000427778 NLRP1Q9C000 1473 aa13.55□□□□□ -0.24
LINC00963-204ENST00000427778 MYCNP04198 464 aaPredicted RBP13.55□□□□□ -0.24
LINC00963-204ENST00000427778 CHIC2Q9UKJ5 165 aa13.55□□□□□ -0.24
LINC00963-204ENST00000427778 ERVK-7P63135 1459 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms