RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 SETD1BQ9UPS6 1966 aaKnown RBP19.79■□□□□ 0.76
GPC1-204ENST00000426280 WASHC2CQ9Y4E1 1318 aa19.78■□□□□ 0.76
GPC1-204ENST00000426280 NPATQ14207 1427 aa19.78■□□□□ 0.76
GPC1-204ENST00000426280 ILDR1Q86SU0 546 aaPredicted RBP19.78■□□□□ 0.76
GPC1-204ENST00000426280 CROCC2H7BZ55 1655 aa19.78■□□□□ 0.76
GPC1-204ENST00000426280 STRCQ7RTU9 1775 aa19.78■□□□□ 0.76
GPC1-204ENST00000426280 SHANK2Q9UPX8 1470 aa19.76■□□□□ 0.75
GPC1-204ENST00000426280 KIF15Q9NS87 1388 aa19.76■□□□□ 0.75
GPC1-204ENST00000426280 MROH1Q8NDA8 1641 aa19.76■□□□□ 0.75
GPC1-204ENST00000426280 DUOX2Q9NRD8 1548 aa19.74■□□□□ 0.75
GPC1-204ENST00000426280 KDM5DQ9BY66 1539 aa19.73■□□□□ 0.75
GPC1-204ENST00000426280 NCOA1Q15788 1441 aa19.73■□□□□ 0.75
GPC1-204ENST00000426280 RNF17Q9BXT8 1623 aaKnown RBP19.73■□□□□ 0.75
GPC1-204ENST00000426280 ABCC3O15438 1527 aa19.71■□□□□ 0.75
GPC1-204ENST00000426280 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.7■□□□□ 0.74
GPC1-204ENST00000426280 PZPP20742 1482 aa19.7■□□□□ 0.74
GPC1-204ENST00000426280 NCKAP5LQ9HCH0 1330 aa19.7■□□□□ 0.74
GPC1-204ENST00000426280 MYO3AQ8NEV4 1616 aa19.69■□□□□ 0.74
GPC1-204ENST00000426280 EIF2AK4Q9P2K8 1649 aaKnown RBP19.69■□□□□ 0.74
GPC1-204ENST00000426280 ANKRD30AQ9BXX3 1397 aa19.69■□□□□ 0.74
GPC1-204ENST00000426280 CAMSAP1Q5T5Y3 1602 aa19.68■□□□□ 0.74
GPC1-204ENST00000426280 TNRQ92752 1358 aa19.67■□□□□ 0.74
GPC1-204ENST00000426280 ERBINQ96RT1 1412 aa19.66■□□□□ 0.74
GPC1-204ENST00000426280 ADGRL2O95490 1459 aa19.66■□□□□ 0.74
GPC1-204ENST00000426280 CEP170BQ9Y4F5 1589 aaPredicted RBP19.66■□□□□ 0.74
GPC1-204ENST00000426280 CEP152O94986 1710 aa19.65■□□□□ 0.74
GPC1-204ENST00000426280 ITGAEP38570 1179 aa19.65■□□□□ 0.74
GPC1-204ENST00000426280 FAM135AQ9P2D6 1515 aa19.65■□□□□ 0.74
GPC1-204ENST00000426280 A2ML1A8K2U0 1454 aa19.63■□□□□ 0.73
GPC1-204ENST00000426280 ZNF142P52746 1687 aaPredicted RBP19.62■□□□□ 0.73
GPC1-204ENST00000426280 PRDM15P57071 1507 aaPredicted RBP19.61■□□□□ 0.73
GPC1-204ENST00000426280 PTPRTO14522 1441 aa19.6■□□□□ 0.73
GPC1-204ENST00000426280 DMRT2Q9Y5R5 561 aa19.6■□□□□ 0.73
GPC1-204ENST00000426280 DEPDC5O75140 1603 aa19.6■□□□□ 0.73
GPC1-204ENST00000426280 ERVK-7P63135 1459 aa19.6■□□□□ 0.73
GPC1-204ENST00000426280 SPATA31D1Q6ZQQ2 1576 aa19.59■□□□□ 0.73
GPC1-204ENST00000426280 CERKQ8TCT0 537 aa19.59■□□□□ 0.73
GPC1-204ENST00000426280 ZC3H13Q5T200 1668 aaKnown RBP19.59■□□□□ 0.73
GPC1-204ENST00000426280 ANKRD50Q9ULJ7 1429 aa19.58■□□□□ 0.72
GPC1-204ENST00000426280 VWDEQ8N2E2 1590 aa19.57■□□□□ 0.72
GPC1-204ENST00000426280 CFAP65Q6ZU64 1925 aaKnown RBP19.57■□□□□ 0.72
GPC1-204ENST00000426280 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.57■□□□□ 0.72
GPC1-204ENST00000426280 PLA2R1Q13018 1463 aa19.55■□□□□ 0.72
GPC1-204ENST00000426280 ARHGAP31Q2M1Z3 1444 aa19.55■□□□□ 0.72
GPC1-204ENST00000426280 FBXO41Q8TF61 875 aa19.55■□□□□ 0.72
GPC1-204ENST00000426280 PKD2Q13563 968 aa19.54■□□□□ 0.72
GPC1-204ENST00000426280 NLRP1Q9C000 1473 aa19.53■□□□□ 0.72
GPC1-204ENST00000426280 RRBP1Q9P2E9 1410 aaKnown RBP19.52■□□□□ 0.72
GPC1-204ENST00000426280 LTBP4Q8N2S1 1624 aa19.52■□□□□ 0.72
GPC1-204ENST00000426280 ROCK1Q13464 1354 aa19.52■□□□□ 0.72
GPC1-204ENST00000426280 KANK1Q14678 1352 aa19.52■□□□□ 0.72
GPC1-204ENST00000426280 UGGT1Q9NYU2 1555 aa19.52■□□□□ 0.71
GPC1-204ENST00000426280 ZNF335Q9H4Z2 1342 aaPredicted RBP19.51■□□□□ 0.71
GPC1-204ENST00000426280 LMTK2Q8IWU2 1503 aa19.51■□□□□ 0.71
GPC1-204ENST00000426280 NEURL4Q96JN8 1562 aa19.5■□□□□ 0.71
GPC1-204ENST00000426280 THEMISQ8N1K5 641 aaPredicted RBP19.5■□□□□ 0.71
GPC1-204ENST00000426280 IDI1Q13907 227 aa19.48■□□□□ 0.71
GPC1-204ENST00000426280 ANKLE2Q86XL3 938 aa19.47■□□□□ 0.71
GPC1-204ENST00000426280 SYNMO15061 1565 aa19.45■□□□□ 0.7
GPC1-204ENST00000426280 NOS1P29475 1434 aa19.45■□□□□ 0.7
GPC1-204ENST00000426280 LTKP29376 864 aa19.45■□□□□ 0.7
GPC1-204ENST00000426280 EFCAB6Q5THR3 1501 aa19.45■□□□□ 0.7
GPC1-204ENST00000426280 UBR1Q8IWV7 1749 aa19.45■□□□□ 0.7
GPC1-204ENST00000426280 UNC13BO14795 1591 aa19.44■□□□□ 0.7
GPC1-204ENST00000426280 PIK3C2BO00750 1634 aa19.43■□□□□ 0.7
GPC1-204ENST00000426280 POLR1AO95602 1720 aaPredicted RBP19.41■□□□□ 0.7
GPC1-204ENST00000426280 NPHP4O75161 1426 aaPredicted RBP19.41■□□□□ 0.7
GPC1-204ENST00000426280 NUP155O75694 1391 aa19.4■□□□□ 0.7
GPC1-204ENST00000426280 MED14O60244 1454 aa19.4■□□□□ 0.7
GPC1-204ENST00000426280 TXNDC2Q86VQ3 553 aa19.39■□□□□ 0.69
GPC1-204ENST00000426280 ARHGAP23Q9P227 1491 aa19.39■□□□□ 0.69
GPC1-204ENST00000426280 TET3O43151 1660 aa19.38■□□□□ 0.69
GPC1-204ENST00000426280 NAIPQ13075 1403 aa19.38■□□□□ 0.69
GPC1-204ENST00000426280 E9PCH4 1651 aa19.36■□□□□ 0.69
GPC1-204ENST00000426280 SLIT1O75093 1534 aa19.36■□□□□ 0.69
GPC1-204ENST00000426280 TMEM2Q9UHN6 1383 aa19.35■□□□□ 0.69
GPC1-204ENST00000426280 IQGAP3Q86VI3 1631 aa19.35■□□□□ 0.69
GPC1-204ENST00000426280 SENP3Q9H4L4 574 aaPredicted RBP19.34■□□□□ 0.69
GPC1-204ENST00000426280 STAG3Q9UJ98 1225 aa19.34■□□□□ 0.69
GPC1-204ENST00000426280 RPRD2Q5VT52 1461 aaKnown RBP19.34■□□□□ 0.69
GPC1-204ENST00000426280 SCAF11Q99590 1463 aaKnown RBP19.34■□□□□ 0.69
GPC1-204ENST00000426280 SLC52A1Q9NWF4 448 aa19.33■□□□□ 0.68
GPC1-204ENST00000426280 GCC2Q8IWJ2 1684 aa19.33■□□□□ 0.68
GPC1-204ENST00000426280 IQGAP1P46940 1657 aa19.32■□□□□ 0.68
GPC1-204ENST00000426280 STRCP1A6NGW2 1772 aa19.31■□□□□ 0.68
GPC1-204ENST00000426280 ADGRB3O60242 1522 aa19.29■□□□□ 0.68
GPC1-204ENST00000426280 EID1Q9Y6B2 187 aa19.28■□□□□ 0.68
GPC1-204ENST00000426280 HFM1A2PYH4 1435 aa19.27■□□□□ 0.68
GPC1-204ENST00000426280 CHGAP10645 457 aaKnown RBP19.27■□□□□ 0.68
GPC1-204ENST00000426280 NUTM2DQ5VT03 806 aaPredicted RBP19.27■□□□□ 0.68
GPC1-204ENST00000426280 MYO5BQ9ULV0 1848 aa19.27■□□□□ 0.68
GPC1-204ENST00000426280 TMEM131LA2VDJ0 1609 aa19.26■□□□□ 0.67
GPC1-204ENST00000426280 SLC26A8Q96RN1 970 aa19.26■□□□□ 0.67
GPC1-204ENST00000426280 IQSEC2Q5JU85 1478 aa19.26■□□□□ 0.67
GPC1-204ENST00000426280 KDM5AP29375 1690 aaKnown RBP19.26■□□□□ 0.67
GPC1-204ENST00000426280 ZFYVE9O95405 1425 aa19.25■□□□□ 0.67
GPC1-204ENST00000426280 UBAP1LF5GYI3 381 aa19.24■□□□□ 0.67
GPC1-204ENST00000426280 TRIM52Q96A61 297 aa19.24■□□□□ 0.67
GPC1-204ENST00000426280 RIMS2Q9UQ26 1411 aa19.23■□□□□ 0.67
GPC1-204ENST00000426280 CPS1P31327 1500 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms