RNA–Protein interactions for RNA: ENST00000425707.7

RARA-206, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 3,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-206ENST00000425707 TRPM1Q7Z4N2 1603 aa23.17■■□□□ 1.3
RARA-206ENST00000425707 ABCA8O94911 1581 aa23.17■■□□□ 1.3
RARA-206ENST00000425707 RRP1P56182 461 aaKnown RBP23.17■■□□□ 1.3
RARA-206ENST00000425707 PARD3Q8TEW0 1356 aa23.16■■□□□ 1.3
RARA-206ENST00000425707 TCERG1O14776 1098 aaKnown RBP23.16■■□□□ 1.3
RARA-206ENST00000425707 ZBTB47Q9UFB7 747 aaPredicted RBP23.15■■□□□ 1.3
RARA-206ENST00000425707 SYNJ2O15056 1496 aa23.15■■□□□ 1.3
RARA-206ENST00000425707 ZNF326Q5BKZ1 582 aaKnown RBP23.14■■□□□ 1.3
RARA-206ENST00000425707 WASHC2CQ9Y4E1 1318 aa23.14■■□□□ 1.3
RARA-206ENST00000425707 MS4A1P11836 297 aa23.13■■□□□ 1.29
RARA-206ENST00000425707 NLRP13Q86W25 1043 aa23.12■■□□□ 1.29
RARA-206ENST00000425707 POLR3GLQ9BT43 218 aa23.12■■□□□ 1.29
RARA-206ENST00000425707 ST20-MTHFSA0A0A6YYL1 179 aa23.11■■□□□ 1.29
RARA-206ENST00000425707 NUP160Q12769 1436 aa23.11■■□□□ 1.29
RARA-206ENST00000425707 GPRASP1Q5JY77 1395 aa23.1■■□□□ 1.29
RARA-206ENST00000425707 RCAN3Q9UKA8 241 aa23.09■■□□□ 1.29
RARA-206ENST00000425707 ZNF777Q9ULD5 760 aaPredicted RBP23.08■■□□□ 1.29
RARA-206ENST00000425707 PLEKHH2Q8IVE3 1493 aa23.08■■□□□ 1.29
RARA-206ENST00000425707 PRAG1Q86YV5 1406 aa23.08■■□□□ 1.29
RARA-206ENST00000425707 FAM135AQ9P2D6 1515 aa23.07■■□□□ 1.28
RARA-206ENST00000425707 BLMP54132 1417 aaPredicted RBP23.06■■□□□ 1.28
RARA-206ENST00000425707 TSPY4P0CV99 314 aa23.06■■□□□ 1.28
RARA-206ENST00000425707 TSPY10P0CW01 314 aa23.06■■□□□ 1.28
RARA-206ENST00000425707 UNC13BO14795 1591 aa23.05■■□□□ 1.28
RARA-206ENST00000425707 PLEKHD1A6NEE1 506 aa23.05■■□□□ 1.28
RARA-206ENST00000425707 RTL5Q5HYW3 569 aaPredicted RBP23.05■■□□□ 1.28
RARA-206ENST00000425707 EIF2AK4Q9P2K8 1649 aaKnown RBP23.05■■□□□ 1.28
RARA-206ENST00000425707 PRDM15P57071 1507 aaPredicted RBP23.05■■□□□ 1.28
RARA-206ENST00000425707 ATP10BO94823 1461 aa23.04■■□□□ 1.28
RARA-206ENST00000425707 COL17A1Q9UMD9 1497 aaPredicted RBP23.04■■□□□ 1.28
RARA-206ENST00000425707 MAST1Q9Y2H9 1570 aa23.04■■□□□ 1.28
RARA-206ENST00000425707 CCDC141Q6ZP82 1450 aa23.03■■□□□ 1.28
RARA-206ENST00000425707 NBR1Q14596 966 aa23.03■■□□□ 1.28
RARA-206ENST00000425707 RSPH4AQ5TD94 716 aa23.02■■□□□ 1.28
RARA-206ENST00000425707 CHMP7Q8WUX9 453 aaPredicted RBP23.02■■□□□ 1.28
RARA-206ENST00000425707 DCAF11Q8TEB1 546 aa23.02■■□□□ 1.28
RARA-206ENST00000425707 USP35Q9P2H5 1018 aa23.02■■□□□ 1.28
RARA-206ENST00000425707 PREX2Q70Z35 1606 aa23.01■■□□□ 1.27
RARA-206ENST00000425707 PER1O15534 1290 aaPredicted RBP23.01■■□□□ 1.27
RARA-206ENST00000425707 EXOC6Q8TAG9 804 aa23.01■■□□□ 1.27
RARA-206ENST00000425707 BACH2Q9BYV9 841 aa22.99■■□□□ 1.27
RARA-206ENST00000425707 CCDC144AA2RUR9 1427 aa22.98■■□□□ 1.27
RARA-206ENST00000425707 SAMD9LQ8IVG5 1584 aa22.97■■□□□ 1.27
RARA-206ENST00000425707 PDE4AP27815 886 aa22.97■■□□□ 1.27
RARA-206ENST00000425707 CNGB1Q14028 1251 aaPredicted RBP22.97■■□□□ 1.27
RARA-206ENST00000425707 JPH4Q96JJ6 628 aa22.97■■□□□ 1.27
RARA-206ENST00000425707 CDC42BPBQ9Y5S2 1711 aa22.97■■□□□ 1.27
RARA-206ENST00000425707 IQGAP3Q86VI3 1631 aa22.95■■□□□ 1.27
RARA-206ENST00000425707 ATP10AO60312 1499 aa22.95■■□□□ 1.26
RARA-206ENST00000425707 KDM2AQ9Y2K7 1162 aa22.95■■□□□ 1.26
RARA-206ENST00000425707 MYO5CQ9NQX4 1742 aa22.94■■□□□ 1.26
RARA-206ENST00000425707 PLXNC1O60486 1568 aa22.93■■□□□ 1.26
RARA-206ENST00000425707 A2MP01023 1474 aa22.93■■□□□ 1.26
RARA-206ENST00000425707 RNF17Q9BXT8 1623 aaKnown RBP22.92■■□□□ 1.26
RARA-206ENST00000425707 PLA2R1Q13018 1463 aa22.91■■□□□ 1.26
RARA-206ENST00000425707 PPM1GO15355 546 aaPredicted RBP22.89■■□□□ 1.26
RARA-206ENST00000425707 ERBINQ96RT1 1412 aa22.88■■□□□ 1.25
RARA-206ENST00000425707 TESK2Q96S53 571 aa22.88■■□□□ 1.25
RARA-206ENST00000425707 DDRGK1Q96HY6 314 aa22.87■■□□□ 1.25
RARA-206ENST00000425707 MAGI2Q86UL8 1455 aa22.87■■□□□ 1.25
RARA-206ENST00000425707 CLASP1Q7Z460 1538 aa22.85■■□□□ 1.25
RARA-206ENST00000425707 HNRNPMP52272 730 aaKnown RBP eCLIP22.85■■□□□ 1.25
RARA-206ENST00000425707 DISP3Q9P2K9 1392 aa22.84■■□□□ 1.25
RARA-206ENST00000425707 TMF1P82094 1093 aa22.81■■□□□ 1.24
RARA-206ENST00000425707 CDCA7LQ96GN5 454 aa22.81■■□□□ 1.24
RARA-206ENST00000425707 SENP3-EIF4A1A0A087X0R7 540 aa22.8■■□□□ 1.24
RARA-206ENST00000425707 NBPF1Q3BBV0 1214 aa22.8■■□□□ 1.24
RARA-206ENST00000425707 DUOX2Q9NRD8 1548 aa22.8■■□□□ 1.24
RARA-206ENST00000425707 SYCP2Q9BX26 1530 aa22.79■■□□□ 1.24
RARA-206ENST00000425707 IQGAP1P46940 1657 aa22.79■■□□□ 1.24
RARA-206ENST00000425707 KDM2BQ8NHM5 1336 aa22.78■■□□□ 1.24
RARA-206ENST00000425707 PANK3Q9H999 370 aa22.78■■□□□ 1.24
RARA-206ENST00000425707 NPM2Q86SE8 214 aaKnown RBP22.77■■□□□ 1.24
RARA-206ENST00000425707 CRBNQ96SW2 442 aa22.77■■□□□ 1.24
RARA-206ENST00000425707 SYNMO15061 1565 aa22.77■■□□□ 1.23
RARA-206ENST00000425707 WDR7Q9Y4E6 1490 aa22.75■■□□□ 1.23
RARA-206ENST00000425707 NEFMP07197 916 aa22.75■■□□□ 1.23
RARA-206ENST00000425707 CENPQQ7L2Z9 268 aaPredicted RBP22.74■■□□□ 1.23
RARA-206ENST00000425707 SALL2Q9Y467 1007 aaPredicted RBP22.74■■□□□ 1.23
RARA-206ENST00000425707 STAC3Q96MF2 364 aa22.73■■□□□ 1.23
RARA-206ENST00000425707 MADDQ8WXG6 1647 aa22.73■■□□□ 1.23
RARA-206ENST00000425707 NPC1L1Q9UHC9 1359 aa22.72■■□□□ 1.23
RARA-206ENST00000425707 CC2D1BQ5T0F9 858 aaKnown RBP22.72■■□□□ 1.23
RARA-206ENST00000425707 TTC37Q6PGP7 1564 aa22.72■■□□□ 1.23
RARA-206ENST00000425707 ZNF521Q96K83 1311 aa22.72■■□□□ 1.23
RARA-206ENST00000425707 ARHGAP5Q13017 1502 aa22.72■■□□□ 1.23
RARA-206ENST00000425707 PIK3C2GO75747 1445 aa22.71■■□□□ 1.23
RARA-206ENST00000425707 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.71■■□□□ 1.23
RARA-206ENST00000425707 SPHKAPQ2M3C7 1700 aa22.69■■□□□ 1.22
RARA-206ENST00000425707 PLIN1O60240 522 aa22.69■■□□□ 1.22
RARA-206ENST00000425707 EIF3AQ14152 1382 aaKnown RBP22.69■■□□□ 1.22
RARA-206ENST00000425707 RGL3Q3MIN7 710 aa22.68■■□□□ 1.22
RARA-206ENST00000425707 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.68■■□□□ 1.22
RARA-206ENST00000425707 SCAPERQ9BY12 1400 aa22.68■■□□□ 1.22
RARA-206ENST00000425707 CDCA8Q53HL2 280 aa22.68■■□□□ 1.22
RARA-206ENST00000425707 DUSP27Q5VZP5 1158 aa22.68■■□□□ 1.22
RARA-206ENST00000425707 ABCC2Q92887 1545 aa22.67■■□□□ 1.22
RARA-206ENST00000425707 ADAMTS8Q9UP79 889 aa22.66■■□□□ 1.22
RARA-206ENST00000425707 ASXL1Q8IXJ9 1541 aa22.66■■□□□ 1.22
RARA-206ENST00000425707 KIAA1210Q9ULL0 1709 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms