RNA–Protein interactions for RNA: ENST00000424387.5

TOM1-205, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-205ENST00000424387 SYCP2Q9BX26 1530 aa24.44■■□□□ 1.5
TOM1-205ENST00000424387 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.43■■□□□ 1.53e-6■■■■■ 31
TOM1-205ENST00000424387 TTC37Q6PGP7 1564 aa24.43■■□□□ 1.5
TOM1-205ENST00000424387 CNGB1Q14028 1251 aaPredicted RBP24.42■■□□□ 1.5
TOM1-205ENST00000424387 UNC13BO14795 1591 aa24.42■■□□□ 1.5
TOM1-205ENST00000424387 CCDC144AA2RUR9 1427 aa24.41■■□□□ 1.5
TOM1-205ENST00000424387 SMG6Q86US8 1419 aaKnown RBP24.41■■□□□ 1.5
TOM1-205ENST00000424387 PLEKHH2Q8IVE3 1493 aa24.4■■□□□ 1.5
TOM1-205ENST00000424387 PNISRQ8TF01 805 aaKnown RBP24.39■■□□□ 1.5
TOM1-205ENST00000424387 ABCC2Q92887 1545 aa24.39■■□□□ 1.49
TOM1-205ENST00000424387 KTN1Q86UP2 1357 aaKnown RBP24.38■■□□□ 1.49
TOM1-205ENST00000424387 TMC1Q8TDI8 760 aa24.38■■□□□ 1.49
TOM1-205ENST00000424387 MYO5CQ9NQX4 1742 aa24.38■■□□□ 1.49
TOM1-205ENST00000424387 PRAG1Q86YV5 1406 aa24.37■■□□□ 1.49
TOM1-205ENST00000424387 TRPM1Q7Z4N2 1603 aa24.37■■□□□ 1.49
TOM1-205ENST00000424387 PLXNC1O60486 1568 aa24.36■■□□□ 1.49
TOM1-205ENST00000424387 RALBP1Q15311 655 aa24.35■■□□□ 1.49
TOM1-205ENST00000424387 PLA2R1Q13018 1463 aa24.35■■□□□ 1.49
TOM1-205ENST00000424387 NUDCQ9Y266 331 aa24.34■■□□□ 1.49
TOM1-205ENST00000424387 E9PCH4 1651 aa24.34■■□□□ 1.49
TOM1-205ENST00000424387 IQGAP3Q86VI3 1631 aa24.34■■□□□ 1.49
TOM1-205ENST00000424387 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.33■■□□□ 1.49
TOM1-205ENST00000424387 MYBBP1AQ9BQG0 1328 aaKnown RBP24.32■■□□□ 1.48
TOM1-205ENST00000424387 ERCC6L2Q5T890 1561 aa24.32■■□□□ 1.48
TOM1-205ENST00000424387 BRD4O60885 1362 aaPredicted RBP24.32■■□□□ 1.48
TOM1-205ENST00000424387 DUOX2Q9NRD8 1548 aa24.31■■□□□ 1.48
TOM1-205ENST00000424387 RGL3Q3MIN7 710 aa24.31■■□□□ 1.48
TOM1-205ENST00000424387 GPRASP1Q5JY77 1395 aa24.29■■□□□ 1.48
TOM1-205ENST00000424387 LRPPRCP42704 1394 aaKnown RBP24.28■■□□□ 1.48
TOM1-205ENST00000424387 A2MP01023 1474 aa24.28■■□□□ 1.48
TOM1-205ENST00000424387 B4GALNT3Q6L9W6 998 aa24.27■■□□□ 1.48
TOM1-205ENST00000424387 RNF123Q5XPI4 1314 aa24.27■■□□□ 1.48
TOM1-205ENST00000424387 PLCH2O75038 1416 aa24.27■■□□□ 1.48
TOM1-205ENST00000424387 NBPF1Q3BBV0 1214 aa24.27■■□□□ 1.48
TOM1-205ENST00000424387 ATP10AO60312 1499 aa24.27■■□□□ 1.48
TOM1-205ENST00000424387 LAMC1P11047 1609 aa24.27■■□□□ 1.48
TOM1-205ENST00000424387 ERBINQ96RT1 1412 aa24.26■■□□□ 1.47
TOM1-205ENST00000424387 MAGI2Q86UL8 1455 aa24.25■■□□□ 1.47
TOM1-205ENST00000424387 MYT1LQ9UL68 1186 aa24.25■■□□□ 1.47
TOM1-205ENST00000424387 FANCIQ9NVI1 1328 aa24.25■■□□□ 1.47
TOM1-205ENST00000424387 EFCAB2Q5VUJ9 269 aa24.25■■□□□ 1.47
TOM1-205ENST00000424387 PRDM15P57071 1507 aaPredicted RBP24.22■■□□□ 1.47
TOM1-205ENST00000424387 EIF2AK4Q9P2K8 1649 aaKnown RBP24.22■■□□□ 1.47
TOM1-205ENST00000424387 ZCCHC11Q5TAX3 1644 aaKnown RBP24.21■■□□□ 1.47
TOM1-205ENST00000424387 UHRF1BP1LA0JNW5 1464 aa24.21■■□□□ 1.47
TOM1-205ENST00000424387 PARD3Q8TEW0 1356 aa24.2■■□□□ 1.46
TOM1-205ENST00000424387 PER1O15534 1290 aaPredicted RBP24.19■■□□□ 1.46
TOM1-205ENST00000424387 NLRP13Q86W25 1043 aa24.19■■□□□ 1.46
TOM1-205ENST00000424387 COL17A1Q9UMD9 1497 aaPredicted RBP24.18■■□□□ 1.46
TOM1-205ENST00000424387 WASHC2CQ9Y4E1 1318 aa24.17■■□□□ 1.46
TOM1-205ENST00000424387 TESK2Q96S53 571 aa24.17■■□□□ 1.46
TOM1-205ENST00000424387 ABCC1P33527 1531 aa24.17■■□□□ 1.46
TOM1-205ENST00000424387 MSH5O43196 834 aa24.14■■□□□ 1.46
TOM1-205ENST00000424387 CLASP1Q7Z460 1538 aa24.14■■□□□ 1.46
TOM1-205ENST00000424387 TRAPPC8Q9Y2L5 1435 aa24.13■■□□□ 1.45
TOM1-205ENST00000424387 SENP3-EIF4A1A0A087X0R7 540 aa24.12■■□□□ 1.45
TOM1-205ENST00000424387 DISP3Q9P2K9 1392 aa24.12■■□□□ 1.45
TOM1-205ENST00000424387 TMF1P82094 1093 aa24.11■■□□□ 1.45
TOM1-205ENST00000424387 PRKCSHP14314 528 aaPredicted RBP24.1■■□□□ 1.45
TOM1-205ENST00000424387 RTEL1-TNFRSF6BF6WH68 1400 aa24.1■■□□□ 1.45
TOM1-205ENST00000424387 SPAG9O60271 1321 aaKnown RBP24.08■■□□□ 1.45
TOM1-205ENST00000424387 CCDC136Q96JN2 1154 aa24.08■■□□□ 1.45
TOM1-205ENST00000424387 RNF17Q9BXT8 1623 aaKnown RBP24.08■■□□□ 1.44
TOM1-205ENST00000424387 ARAP3Q8WWN8 1544 aa24.07■■□□□ 1.44
TOM1-205ENST00000424387 PANK3Q9H999 370 aa24.07■■□□□ 1.44
TOM1-205ENST00000424387 PDE3BQ13370 1112 aa24.06■■□□□ 1.44
TOM1-205ENST00000424387 INSRP06213 1382 aa24.04■■□□□ 1.44
TOM1-205ENST00000424387 CC2D1BQ5T0F9 858 aaKnown RBP24.03■■□□□ 1.44
TOM1-205ENST00000424387 STAC3Q96MF2 364 aa24.03■■□□□ 1.44
TOM1-205ENST00000424387 AFAP1Q8N556 730 aa24.03■■□□□ 1.44
TOM1-205ENST00000424387 TRPM2O94759 1503 aa24.02■■□□□ 1.44
TOM1-205ENST00000424387 ZFYVE16Q7Z3T8 1539 aa24.01■■□□□ 1.43
TOM1-205ENST00000424387 MADDQ8WXG6 1647 aa24■■□□□ 1.43
TOM1-205ENST00000424387 ZMYM4Q5VZL5 1548 aa24■■□□□ 1.43
TOM1-205ENST00000424387 PTPRTO14522 1441 aa24■■□□□ 1.43
TOM1-205ENST00000424387 RRP1P56182 461 aaKnown RBP23.99■■□□□ 1.43
TOM1-205ENST00000424387 CEP152O94986 1710 aa23.99■■□□□ 1.43
TOM1-205ENST00000424387 DEPDC5O75140 1603 aa23.98■■□□□ 1.43
TOM1-205ENST00000424387 RCAN3Q9UKA8 241 aa23.98■■□□□ 1.43
TOM1-205ENST00000424387 SPHKAPQ2M3C7 1700 aa23.98■■□□□ 1.43
TOM1-205ENST00000424387 IQGAP1P46940 1657 aa23.97■■□□□ 1.43
TOM1-205ENST00000424387 ERICH6Q7L0X2 663 aa23.97■■□□□ 1.43
TOM1-205ENST00000424387 SALL2Q9Y467 1007 aaPredicted RBP23.97■■□□□ 1.43
TOM1-205ENST00000424387 BLMP54132 1417 aaPredicted RBP23.95■■□□□ 1.42
TOM1-205ENST00000424387 TET3O43151 1660 aa23.95■■□□□ 1.42
TOM1-205ENST00000424387 SCAPERQ9BY12 1400 aa23.94■■□□□ 1.42
TOM1-205ENST00000424387 CLTCL1P53675 1640 aa23.93■■□□□ 1.42
TOM1-205ENST00000424387 KANK1Q14678 1352 aa23.93■■□□□ 1.42
TOM1-205ENST00000424387 WDR7Q9Y4E6 1490 aa23.93■■□□□ 1.42
TOM1-205ENST00000424387 CDCA8Q53HL2 280 aa23.92■■□□□ 1.42
TOM1-205ENST00000424387 SCAF11Q99590 1463 aaKnown RBP23.92■■□□□ 1.42
TOM1-205ENST00000424387 ABCA9Q8IUA7 1624 aa23.91■■□□□ 1.42
TOM1-205ENST00000424387 ATP7AQ04656 1500 aa23.91■■□□□ 1.42
TOM1-205ENST00000424387 FANCAO15360 1455 aa23.9■■□□□ 1.42
TOM1-205ENST00000424387 INO80Q9ULG1 1556 aaPredicted RBP23.9■■□□□ 1.42
TOM1-205ENST00000424387 VWDEQ8N2E2 1590 aa23.9■■□□□ 1.42
TOM1-205ENST00000424387 KNSTRNQ9Y448 316 aa23.9■■□□□ 1.42
TOM1-205ENST00000424387 CDCA7LQ96GN5 454 aa23.88■■□□□ 1.41
TOM1-205ENST00000424387 EXOC6Q8TAG9 804 aa23.88■■□□□ 1.41
TOM1-205ENST00000424387 NEURL4Q96JN8 1562 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms