RNA–Protein interactions for RNA: ENST00000424387.5

TOM1-205, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-205ENST00000424387 NISCHQ9Y2I1 1504 aa37.51■■■■□ 3.6
TOM1-205ENST00000424387 CCDC180Q9P1Z9 1646 aa32■■■□□ 2.71
TOM1-205ENST00000424387 SHROOM4Q9ULL8 1493 aa31.72■■■□□ 2.67
TOM1-205ENST00000424387 ZCCHC6Q5VYS8 1495 aaKnown RBP31.71■■■□□ 2.67
TOM1-205ENST00000424387 SUPT5HO00267 1087 aaKnown RBP31.13■■■□□ 2.57
TOM1-205ENST00000424387 DCAF8L2P0C7V8 631 aa30.93■■■□□ 2.54
TOM1-205ENST00000424387 DCAF1Q9Y4B6 1507 aa30.88■■■□□ 2.53
TOM1-205ENST00000424387 CHIC1Q5VXU3 224 aa30.34■■■□□ 2.45
TOM1-205ENST00000424387 MYO15BQ96JP2 1530 aa30.12■■■□□ 2.41
TOM1-205ENST00000424387 ABCC9O60706 1549 aa29.9■■■□□ 2.38
TOM1-205ENST00000424387 SCRIBQ14160 1630 aa29.81■■■□□ 2.36
TOM1-205ENST00000424387 RSF1Q96T23 1441 aaPredicted RBP29.62■■■□□ 2.33
TOM1-205ENST00000424387 NACADO15069 1562 aa29.58■■■□□ 2.33
TOM1-205ENST00000424387 LOC105371045A0A1W2PR82 267 aa29.36■■■□□ 2.29
TOM1-205ENST00000424387 RB1CC1Q8TDY2 1594 aa29.34■■■□□ 2.29
TOM1-205ENST00000424387 HRCP23327 699 aa29.32■■■□□ 2.28
TOM1-205ENST00000424387 PCGF6Q9BYE7 350 aa29.27■■■□□ 2.28
TOM1-205ENST00000424387 CECR2Q9BXF3 1484 aa29.17■■■□□ 2.26
TOM1-205ENST00000424387 MROH2BQ7Z745 1585 aa29.1■■■□□ 2.25
TOM1-205ENST00000424387 TRIM41Q8WV44 630 aa29.1■■■□□ 2.25
TOM1-205ENST00000424387 WIZO95785 1651 aa28.94■■■□□ 2.22
TOM1-205ENST00000424387 TRIM26Q12899 539 aaPredicted RBP28.85■■■□□ 2.21
TOM1-205ENST00000424387 BAZ1AQ9NRL2 1556 aaPredicted RBP28.83■■■□□ 2.21
TOM1-205ENST00000424387 FAM9AQ8IZU1 332 aaPredicted RBP28.73■■■□□ 2.19
TOM1-205ENST00000424387 UNC13AQ9UPW8 1703 aa28.61■■■□□ 2.17
TOM1-205ENST00000424387 SMARCA4P51532 1647 aa28.57■■■□□ 2.16
TOM1-205ENST00000424387 EIF4G1Q04637 1599 aaKnown RBP28.57■■■□□ 2.16
TOM1-205ENST00000424387 PPARGC1BQ86YN6 1023 aaKnown RBP28.57■■■□□ 2.16
TOM1-205ENST00000424387 TOP2AP11388 1531 aaKnown RBP28.55■■■□□ 2.16
TOM1-205ENST00000424387 CCDC88BA6NC98 1476 aa28.39■■■□□ 2.14
TOM1-205ENST00000424387 EHMT2Q96KQ7 1210 aa28.38■■■□□ 2.13
TOM1-205ENST00000424387 SMARCA2P51531 1590 aa28.37■■■□□ 2.13
TOM1-205ENST00000424387 PELP1Q8IZL8 1130 aaKnown RBP28.28■■■□□ 2.12
TOM1-205ENST00000424387 ZEB1P37275 1124 aaPredicted RBP28.27■■■□□ 2.12
TOM1-205ENST00000424387 BICRAQ9NZM4 1560 aa28.25■■■□□ 2.11
TOM1-205ENST00000424387 ABCC8Q09428 1581 aa28.23■■■□□ 2.11
TOM1-205ENST00000424387 PABPN1Q86U42 306 aaKnown RBP eCLIP28.15■■■□□ 2.1
TOM1-205ENST00000424387 PEG3Q9GZU2 1588 aa28.09■■■□□ 2.09
TOM1-205ENST00000424387 EEA1Q15075 1411 aa27.97■■■□□ 2.07
TOM1-205ENST00000424387 SOGA1O94964 1423 aa27.97■■■□□ 2.07
TOM1-205ENST00000424387 WRNQ14191 1432 aaPredicted RBP eCLIP27.89■■■□□ 2.05
TOM1-205ENST00000424387 TNIKQ9UKE5 1360 aa27.88■■■□□ 2.05
TOM1-205ENST00000424387 CSRNP3Q8WYN3 585 aa27.88■■■□□ 2.05
TOM1-205ENST00000424387 CEP162Q5TB80 1403 aa27.85■■■□□ 2.05
TOM1-205ENST00000424387 ATAD2BQ9ULI0 1458 aa27.84■■■□□ 2.05
TOM1-205ENST00000424387 RUSC2Q8N2Y8 1516 aa27.82■■■□□ 2.04
TOM1-205ENST00000424387 BAZ1BQ9UIG0 1483 aaKnown RBP27.75■■■□□ 2.03
TOM1-205ENST00000424387 GOLGA3Q08378 1498 aa27.71■■■□□ 2.03
TOM1-205ENST00000424387 UBTFP17480 764 aaKnown RBP27.7■■■□□ 2.02
TOM1-205ENST00000424387 SYNJ1O43426 1573 aa27.67■■■□□ 2.02
TOM1-205ENST00000424387 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.59■■■□□ 2.01
TOM1-205ENST00000424387 CEP164Q9UPV0 1460 aa27.57■■■□□ 2
TOM1-205ENST00000424387 CCER1Q8TC90 406 aaPredicted RBP27.57■■■□□ 2
TOM1-205ENST00000424387 KIF21BO75037 1637 aa27.56■■■□□ 2
TOM1-205ENST00000424387 TTBK1Q5TCY1 1321 aaPredicted RBP27.47■■□□□ 1.99
TOM1-205ENST00000424387 MYT1Q01538 1121 aa27.41■■□□□ 1.98
TOM1-205ENST00000424387 TOP2BQ02880 1626 aa27.4■■□□□ 1.98
TOM1-205ENST00000424387 CLIP1P30622 1438 aa27.36■■□□□ 1.97
TOM1-205ENST00000424387 NCAPD3P42695 1498 aa27.36■■□□□ 1.97
TOM1-205ENST00000424387 HMGXB3Q12766 1538 aa27.35■■□□□ 1.97
TOM1-205ENST00000424387 BIVM-ERCC5R4GMW8 1640 aa27.33■■□□□ 1.97
TOM1-205ENST00000424387 RAPGEF2Q9Y4G8 1499 aa27.3■■□□□ 1.96
TOM1-205ENST00000424387 VPS8Q8N3P4 1428 aa27.26■■□□□ 1.95
TOM1-205ENST00000424387 ERICH3Q5RHP9 1530 aa27.14■■□□□ 1.94
TOM1-205ENST00000424387 APLP2Q06481 763 aa27.13■■□□□ 1.93
TOM1-205ENST00000424387 PRXQ9BXM0 1461 aa27.11■■□□□ 1.93
TOM1-205ENST00000424387 CUX1P39880 1505 aa27.1■■□□□ 1.93
TOM1-205ENST00000424387 CFTRP13569 1480 aa27.1■■□□□ 1.93
TOM1-205ENST00000424387 RANGAP1P46060 587 aaPredicted RBP27.02■■□□□ 1.92
TOM1-205ENST00000424387 KIF27Q86VH2 1401 aa27.01■■□□□ 1.91
TOM1-205ENST00000424387 HNRNPUL2Q1KMD3 747 aaKnown RBP27.01■■□□□ 1.91
TOM1-205ENST00000424387 DIEXFQ68CQ4 756 aaKnown RBP27.01■■□□□ 1.91
TOM1-205ENST00000424387 SCAF1Q9H7N4 1312 aaKnown RBP26.98■■□□□ 1.91
TOM1-205ENST00000424387 PRDM2Q13029 1718 aa26.93■■□□□ 1.9
TOM1-205ENST00000424387 ARAP1Q96P48 1450 aa26.92■■□□□ 1.9
TOM1-205ENST00000424387 ZNF316A6NFI3 1004 aaPredicted RBP26.88■■□□□ 1.89
TOM1-205ENST00000424387 CADPSQ9ULU8 1353 aa26.8■■□□□ 1.88
TOM1-205ENST00000424387 ACIN1Q9UKV3 1341 aaKnown RBP26.75■■□□□ 1.87
TOM1-205ENST00000424387 KANK4Q5T7N3 995 aaPredicted RBP26.73■■□□□ 1.87
TOM1-205ENST00000424387 ARHGAP35Q9NRY4 1499 aa26.71■■□□□ 1.87
TOM1-205ENST00000424387 CUX2O14529 1486 aa26.7■■□□□ 1.87
TOM1-205ENST00000424387 IGF1RP08069 1367 aa26.7■■□□□ 1.86
TOM1-205ENST00000424387 NEUROD1Q13562 356 aa26.66■■□□□ 1.86
TOM1-205ENST00000424387 CENPBP07199 599 aaPredicted RBP26.65■■□□□ 1.86
TOM1-205ENST00000424387 CLSPNQ9HAW4 1339 aa26.64■■□□□ 1.86
TOM1-205ENST00000424387 RRBP1Q9P2E9 1410 aaKnown RBP26.64■■□□□ 1.85
TOM1-205ENST00000424387 FGD5Q6ZNL6 1462 aa26.62■■□□□ 1.85
TOM1-205ENST00000424387 CC2D2AQ9P2K1 1620 aa26.62■■□□□ 1.85
TOM1-205ENST00000424387 CARMIL1Q5VZK9 1371 aa26.59■■□□□ 1.85
TOM1-205ENST00000424387 DHX57Q6P158 1386 aaKnown RBP26.55■■□□□ 1.84
TOM1-205ENST00000424387 FANCD2Q9BXW9 1451 aa26.51■■□□□ 1.83
TOM1-205ENST00000424387 CCNB3Q8WWL7 1395 aa26.5■■□□□ 1.83
TOM1-205ENST00000424387 MAP3K1Q13233 1512 aa26.49■■□□□ 1.83
TOM1-205ENST00000424387 TIAM1Q13009 1591 aa26.43■■□□□ 1.82
TOM1-205ENST00000424387 DNMBPQ6XZF7 1577 aa26.42■■□□□ 1.82
TOM1-205ENST00000424387 MIER1Q8N108 512 aa26.41■■□□□ 1.82
TOM1-205ENST00000424387 GTF3C3Q9Y5Q9 886 aa26.39■■□□□ 1.81
TOM1-205ENST00000424387 ABCA10Q8WWZ4 1543 aa26.36■■□□□ 1.81
TOM1-205ENST00000424387 FHAD1B1AJZ9 1412 aa26.35■■□□□ 1.81
TOM1-205ENST00000424387 TOPBP1Q92547 1522 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms