RNA–Protein interactions for RNA: ENST00000424254.6

FBXO28-202, Transcript of F-box protein 28, humanhuman

TSL 1 (best) BASIC

Gene FBXO28, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-202ENST00000424254 WASHC2CQ9Y4E1 1318 aa30.44■■■□□ 2.46
FBXO28-202ENST00000424254 KDM5DQ9BY66 1539 aa30.43■■■□□ 2.46
FBXO28-202ENST00000424254 FAM50AQ14320 339 aaKnown RBP30.43■■■□□ 2.46
FBXO28-202ENST00000424254 DUOX2Q9NRD8 1548 aa30.43■■■□□ 2.46
FBXO28-202ENST00000424254 PPARGC1BQ86YN6 1023 aaKnown RBP30.42■■■□□ 2.46
FBXO28-202ENST00000424254 CHIC2Q9UKJ5 165 aa30.42■■■□□ 2.46
FBXO28-202ENST00000424254 SETD1BQ9UPS6 1966 aaKnown RBP30.41■■■□□ 2.46
FBXO28-202ENST00000424254 FAM135AQ9P2D6 1515 aa30.41■■■□□ 2.46
FBXO28-202ENST00000424254 RNF17Q9BXT8 1623 aaKnown RBP30.39■■■□□ 2.46
FBXO28-202ENST00000424254 EIF2AK4Q9P2K8 1649 aaKnown RBP30.38■■■□□ 2.45
FBXO28-202ENST00000424254 ANKRD30AQ9BXX3 1397 aa30.36■■■□□ 2.45
FBXO28-202ENST00000424254 ERBINQ96RT1 1412 aa30.36■■■□□ 2.45
FBXO28-202ENST00000424254 FBXO31Q5XUX0 539 aaPredicted RBP30.35■■■□□ 2.45
FBXO28-202ENST00000424254 PZPP20742 1482 aa30.34■■■□□ 2.45
FBXO28-202ENST00000424254 MROH1Q8NDA8 1641 aa30.34■■■□□ 2.45
FBXO28-202ENST00000424254 NCOA1Q15788 1441 aa30.33■■■□□ 2.45
FBXO28-202ENST00000424254 ABCC3O15438 1527 aa30.32■■■□□ 2.44
FBXO28-202ENST00000424254 MYO3AQ8NEV4 1616 aa30.3■■■□□ 2.44
FBXO28-202ENST00000424254 ADGRL2O95490 1459 aa30.29■■■□□ 2.44
FBXO28-202ENST00000424254 TNRQ92752 1358 aa30.28■■■□□ 2.44
FBXO28-202ENST00000424254 STRCQ7RTU9 1775 aa30.26■■■□□ 2.43
FBXO28-202ENST00000424254 CEP170BQ9Y4F5 1589 aaPredicted RBP30.25■■■□□ 2.43
FBXO28-202ENST00000424254 PRDM15P57071 1507 aaPredicted RBP30.24■■■□□ 2.43
FBXO28-202ENST00000424254 ZC3H13Q5T200 1668 aaKnown RBP30.23■■■□□ 2.43
FBXO28-202ENST00000424254 DMRT2Q9Y5R5 561 aa30.22■■■□□ 2.43
FBXO28-202ENST00000424254 CAMSAP1Q5T5Y3 1602 aa30.22■■■□□ 2.43
FBXO28-202ENST00000424254 ZNF142P52746 1687 aaPredicted RBP30.22■■■□□ 2.43
FBXO28-202ENST00000424254 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.22■■■□□ 2.43
FBXO28-202ENST00000424254 A2ML1A8K2U0 1454 aa30.21■■■□□ 2.43
FBXO28-202ENST00000424254 ILDR1Q86SU0 546 aaPredicted RBP30.2■■■□□ 2.42
FBXO28-202ENST00000424254 DEPDC5O75140 1603 aa30.17■■■□□ 2.42
FBXO28-202ENST00000424254 PTPRTO14522 1441 aa30.17■■■□□ 2.42
FBXO28-202ENST00000424254 ANKRD50Q9ULJ7 1429 aa30.16■■■□□ 2.42
FBXO28-202ENST00000424254 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.16■■■□□ 2.42
FBXO28-202ENST00000424254 ERVK-7P63135 1459 aa30.15■■■□□ 2.42
FBXO28-202ENST00000424254 PLA2R1Q13018 1463 aa30.15■■■□□ 2.42
FBXO28-202ENST00000424254 CEP152O94986 1710 aa30.15■■■□□ 2.42
FBXO28-202ENST00000424254 NCKAP5LQ9HCH0 1330 aa30.15■■■□□ 2.42
FBXO28-202ENST00000424254 SPATA31D1Q6ZQQ2 1576 aa30.14■■■□□ 2.42
FBXO28-202ENST00000424254 KANK1Q14678 1352 aa30.13■■■□□ 2.41
FBXO28-202ENST00000424254 ITGAEP38570 1179 aa30.13■■■□□ 2.41
FBXO28-202ENST00000424254 NLRP1Q9C000 1473 aa30.13■■■□□ 2.41
FBXO28-202ENST00000424254 ARHGAP31Q2M1Z3 1444 aa30.12■■■□□ 2.41
FBXO28-202ENST00000424254 ROCK1Q13464 1354 aa30.11■■■□□ 2.41
FBXO28-202ENST00000424254 VWDEQ8N2E2 1590 aa30.1■■■□□ 2.41
FBXO28-202ENST00000424254 PKD2Q13563 968 aa30.09■■■□□ 2.41
FBXO28-202ENST00000424254 LMTK2Q8IWU2 1503 aa30.08■■■□□ 2.41
FBXO28-202ENST00000424254 RRBP1Q9P2E9 1410 aaKnown RBP30.07■■■□□ 2.4
FBXO28-202ENST00000424254 UGGT1Q9NYU2 1555 aa30.04■■■□□ 2.4
FBXO28-202ENST00000424254 CERKQ8TCT0 537 aa30.03■■■□□ 2.4
FBXO28-202ENST00000424254 THEMISQ8N1K5 641 aaPredicted RBP30.02■■■□□ 2.4
FBXO28-202ENST00000424254 FBXO41Q8TF61 875 aa30.01■■■□□ 2.4
FBXO28-202ENST00000424254 EFCAB6Q5THR3 1501 aa29.97■■■□□ 2.39
FBXO28-202ENST00000424254 ANKLE2Q86XL3 938 aa29.95■■■□□ 2.38
FBXO28-202ENST00000424254 UNC13BO14795 1591 aa29.93■■■□□ 2.38
FBXO28-202ENST00000424254 NEURL4Q96JN8 1562 aa29.93■■■□□ 2.38
FBXO28-202ENST00000424254 LTBP4Q8N2S1 1624 aa29.92■■■□□ 2.38
FBXO28-202ENST00000424254 ZNF335Q9H4Z2 1342 aaPredicted RBP29.92■■■□□ 2.38
FBXO28-202ENST00000424254 NOS1P29475 1434 aa29.91■■■□□ 2.38
FBXO28-202ENST00000424254 CFAP65Q6ZU64 1925 aaKnown RBP29.89■■■□□ 2.38
FBXO28-202ENST00000424254 RPRD2Q5VT52 1461 aaKnown RBP29.87■■■□□ 2.37
FBXO28-202ENST00000424254 IDI1Q13907 227 aa29.87■■■□□ 2.37
FBXO28-202ENST00000424254 SYNMO15061 1565 aa29.87■■■□□ 2.37
FBXO28-202ENST00000424254 UBR1Q8IWV7 1749 aa29.86■■■□□ 2.37
FBXO28-202ENST00000424254 POLR1AO95602 1720 aaPredicted RBP29.85■■■□□ 2.37
FBXO28-202ENST00000424254 NUP155O75694 1391 aa29.85■■■□□ 2.37
FBXO28-202ENST00000424254 MED14O60244 1454 aa29.84■■■□□ 2.37
FBXO28-202ENST00000424254 NPHP4O75161 1426 aaPredicted RBP29.84■■■□□ 2.37
FBXO28-202ENST00000424254 TET3O43151 1660 aa29.84■■■□□ 2.37
FBXO28-202ENST00000424254 PIK3C2BO00750 1634 aa29.82■■■□□ 2.36
FBXO28-202ENST00000424254 ARHGAP23Q9P227 1491 aa29.81■■■□□ 2.36
FBXO28-202ENST00000424254 NAIPQ13075 1403 aa29.81■■■□□ 2.36
FBXO28-202ENST00000424254 STAG3Q9UJ98 1225 aa29.8■■■□□ 2.36
FBXO28-202ENST00000424254 IQGAP3Q86VI3 1631 aa29.8■■■□□ 2.36
FBXO28-202ENST00000424254 SLIT1O75093 1534 aa29.8■■■□□ 2.36
FBXO28-202ENST00000424254 LTKP29376 864 aa29.79■■■□□ 2.36
FBXO28-202ENST00000424254 SLC52A1Q9NWF4 448 aa29.79■■■□□ 2.36
FBXO28-202ENST00000424254 SCAF11Q99590 1463 aaKnown RBP29.78■■■□□ 2.36
FBXO28-202ENST00000424254 TMEM2Q9UHN6 1383 aa29.78■■■□□ 2.36
FBXO28-202ENST00000424254 TXNDC2Q86VQ3 553 aa29.76■■■□□ 2.36
FBXO28-202ENST00000424254 GCC2Q8IWJ2 1684 aa29.76■■■□□ 2.35
FBXO28-202ENST00000424254 HFM1A2PYH4 1435 aa29.74■■■□□ 2.35
FBXO28-202ENST00000424254 E9PCH4 1651 aa29.72■■■□□ 2.35
FBXO28-202ENST00000424254 IQGAP1P46940 1657 aa29.72■■■□□ 2.35
FBXO28-202ENST00000424254 IQSEC2Q5JU85 1478 aa29.72■■■□□ 2.35
FBXO28-202ENST00000424254 ADGRB3O60242 1522 aa29.72■■■□□ 2.35
FBXO28-202ENST00000424254 EID1Q9Y6B2 187 aa29.71■■■□□ 2.35
FBXO28-202ENST00000424254 KDM5AP29375 1690 aaKnown RBP29.7■■■□□ 2.35
FBXO28-202ENST00000424254 CPS1P31327 1500 aa29.64■■■□□ 2.34
FBXO28-202ENST00000424254 CHGAP10645 457 aaKnown RBP29.6■■■□□ 2.33
FBXO28-202ENST00000424254 TRIM52Q96A61 297 aa29.59■■■□□ 2.33
FBXO28-202ENST00000424254 TMEM131LA2VDJ0 1609 aa29.59■■■□□ 2.33
FBXO28-202ENST00000424254 ZFYVE9O95405 1425 aa29.58■■■□□ 2.33
FBXO28-202ENST00000424254 RIMS2Q9UQ26 1411 aa29.56■■■□□ 2.32
FBXO28-202ENST00000424254 UBAP1LF5GYI3 381 aa29.54■■■□□ 2.32
FBXO28-202ENST00000424254 SLC26A8Q96RN1 970 aa29.53■■■□□ 2.32
FBXO28-202ENST00000424254 PPP1R15AO75807 674 aaPredicted RBP29.5■■■□□ 2.31
FBXO28-202ENST00000424254 STRCP1A6NGW2 1772 aa29.5■■■□□ 2.31
FBXO28-202ENST00000424254 LRRC7Q96NW7 1537 aa29.49■■■□□ 2.31
FBXO28-202ENST00000424254 SLC4A1APQ9BWU0 796 aaKnown RBP29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms