RNA–Protein interactions for RNA: ENST00000423894.5

CMC1-204, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2 BASIC

Gene CMC1, Length 549 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-204ENST00000423894 MROH2AA6NES4 1674 aa22.39■■□□□ 1.18
CMC1-204ENST00000423894 MAST1Q9Y2H9 1570 aa22.39■■□□□ 1.18
CMC1-204ENST00000423894 DAPK1P53355 1430 aa22.39■■□□□ 1.17
CMC1-204ENST00000423894 STRCQ7RTU9 1775 aa22.38■■□□□ 1.17
CMC1-204ENST00000423894 TCOF1Q13428 1488 aaKnown RBP22.38■■□□□ 1.17
CMC1-204ENST00000423894 KIF15Q9NS87 1388 aa22.38■■□□□ 1.17
CMC1-204ENST00000423894 FBXO41Q8TF61 875 aa22.37■■□□□ 1.17
CMC1-204ENST00000423894 CERKQ8TCT0 537 aa22.36■■□□□ 1.17
CMC1-204ENST00000423894 DMRT2Q9Y5R5 561 aa22.36■■□□□ 1.17
CMC1-204ENST00000423894 NCOA1Q15788 1441 aa22.36■■□□□ 1.17
CMC1-204ENST00000423894 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.34■■□□□ 1.171e-6■■■□□ 18.6
CMC1-204ENST00000423894 TNRQ92752 1358 aa22.34■■□□□ 1.17
CMC1-204ENST00000423894 KDM5DQ9BY66 1539 aa22.32■■□□□ 1.16
CMC1-204ENST00000423894 CAMSAP1Q5T5Y3 1602 aa22.31■■□□□ 1.16
CMC1-204ENST00000423894 PZPP20742 1482 aa22.31■■□□□ 1.16
CMC1-204ENST00000423894 SHANK2Q9UPX8 1470 aa22.3■■□□□ 1.16
CMC1-204ENST00000423894 DUOX2Q9NRD8 1548 aa22.3■■□□□ 1.16
CMC1-204ENST00000423894 PTPRTO14522 1441 aa22.3■■□□□ 1.16
CMC1-204ENST00000423894 ABCC3O15438 1527 aa22.29■■□□□ 1.16
CMC1-204ENST00000423894 MROH1Q8NDA8 1641 aa22.28■■□□□ 1.16
CMC1-204ENST00000423894 DNMT1P26358 1616 aaKnown RBP22.27■■□□□ 1.16
CMC1-204ENST00000423894 MYO3AQ8NEV4 1616 aa22.27■■□□□ 1.16
CMC1-204ENST00000423894 ANKRD30AQ9BXX3 1397 aa22.26■■□□□ 1.15
CMC1-204ENST00000423894 CEP170BQ9Y4F5 1589 aaPredicted RBP22.26■■□□□ 1.15
CMC1-204ENST00000423894 A2ML1A8K2U0 1454 aa22.26■■□□□ 1.15
CMC1-204ENST00000423894 RNF17Q9BXT8 1623 aaKnown RBP22.25■■□□□ 1.15
CMC1-204ENST00000423894 PKD2Q13563 968 aa22.24■■□□□ 1.15
CMC1-204ENST00000423894 ERBINQ96RT1 1412 aa22.23■■□□□ 1.15
CMC1-204ENST00000423894 ZNF335Q9H4Z2 1342 aaPredicted RBP22.22■■□□□ 1.15
CMC1-204ENST00000423894 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.22■■□□□ 1.157e-10■□□□□ 8.6
CMC1-204ENST00000423894 FAM135AQ9P2D6 1515 aa22.21■■□□□ 1.15
CMC1-204ENST00000423894 CROCC2H7BZ55 1655 aa22.21■■□□□ 1.15
CMC1-204ENST00000423894 ITGAEP38570 1179 aa22.21■■□□□ 1.15
CMC1-204ENST00000423894 EIF2AK4Q9P2K8 1649 aaKnown RBP22.2■■□□□ 1.14
CMC1-204ENST00000423894 PLA2R1Q13018 1463 aa22.19■■□□□ 1.14
CMC1-204ENST00000423894 ERVK-7P63135 1459 aa22.18■■□□□ 1.14
CMC1-204ENST00000423894 ZNF142P52746 1687 aaPredicted RBP22.17■■□□□ 1.14
CMC1-204ENST00000423894 THEMISQ8N1K5 641 aaPredicted RBP22.17■■□□□ 1.14
CMC1-204ENST00000423894 ADGRL2O95490 1459 aa22.16■■□□□ 1.14
CMC1-204ENST00000423894 LTBP4Q8N2S1 1624 aa22.16■■□□□ 1.14
CMC1-204ENST00000423894 ANKLE2Q86XL3 938 aa22.15■■□□□ 1.14
CMC1-204ENST00000423894 NLRP1Q9C000 1473 aa22.14■■□□□ 1.13
CMC1-204ENST00000423894 SPATA31D1Q6ZQQ2 1576 aa22.13■■□□□ 1.13
CMC1-204ENST00000423894 PRDM15P57071 1507 aaPredicted RBP22.13■■□□□ 1.13
CMC1-204ENST00000423894 CEP152O94986 1710 aa22.13■■□□□ 1.13
CMC1-204ENST00000423894 ANKRD50Q9ULJ7 1429 aa22.13■■□□□ 1.13
CMC1-204ENST00000423894 KANK1Q14678 1352 aa22.12■■□□□ 1.13
CMC1-204ENST00000423894 ARHGAP31Q2M1Z3 1444 aa22.12■■□□□ 1.13
CMC1-204ENST00000423894 CFAP65Q6ZU64 1925 aaKnown RBP22.11■■□□□ 1.13
CMC1-204ENST00000423894 UGGT1Q9NYU2 1555 aa22.11■■□□□ 1.13
CMC1-204ENST00000423894 IDI1Q13907 227 aa22.09■■□□□ 1.13
CMC1-204ENST00000423894 LTKP29376 864 aa22.08■■□□□ 1.13
CMC1-204ENST00000423894 ZC3H13Q5T200 1668 aaKnown RBP22.07■■□□□ 1.12
CMC1-204ENST00000423894 VWDEQ8N2E2 1590 aa22.07■■□□□ 1.12
CMC1-204ENST00000423894 NEURL4Q96JN8 1562 aa22.07■■□□□ 1.12
CMC1-204ENST00000423894 DEPDC5O75140 1603 aa22.06■■□□□ 1.12
CMC1-204ENST00000423894 ROCK1Q13464 1354 aa22.04■■□□□ 1.12
CMC1-204ENST00000423894 LMTK2Q8IWU2 1503 aa22.04■■□□□ 1.12
CMC1-204ENST00000423894 NPHP4O75161 1426 aaPredicted RBP22.04■■□□□ 1.12
CMC1-204ENST00000423894 TXNDC2Q86VQ3 553 aa22.03■■□□□ 1.12
CMC1-204ENST00000423894 NOS1P29475 1434 aa22■■□□□ 1.11
CMC1-204ENST00000423894 STAG3Q9UJ98 1225 aa22■■□□□ 1.11
CMC1-204ENST00000423894 MED14O60244 1454 aa21.98■■□□□ 1.11
CMC1-204ENST00000423894 UBAP1LF5GYI3 381 aa21.97■■□□□ 1.11
CMC1-204ENST00000423894 SENP3Q9H4L4 574 aaPredicted RBP21.97■■□□□ 1.11
CMC1-204ENST00000423894 RRBP1Q9P2E9 1410 aaKnown RBP21.97■■□□□ 1.11
CMC1-204ENST00000423894 EFCAB6Q5THR3 1501 aa21.96■■□□□ 1.11
CMC1-204ENST00000423894 SYNMO15061 1565 aa21.95■■□□□ 1.11
CMC1-204ENST00000423894 NUP155O75694 1391 aa21.95■■□□□ 1.1
CMC1-204ENST00000423894 TMEM2Q9UHN6 1383 aa21.95■■□□□ 1.1
CMC1-204ENST00000423894 ARHGAP23Q9P227 1491 aa21.95■■□□□ 1.1
CMC1-204ENST00000423894 UBR1Q8IWV7 1749 aa21.94■■□□□ 1.1
CMC1-204ENST00000423894 SCAF11Q99590 1463 aaKnown RBP21.93■■□□□ 1.1
CMC1-204ENST00000423894 PIK3C2BO00750 1634 aa21.92■■□□□ 1.1
CMC1-204ENST00000423894 SLC52A1Q9NWF4 448 aa21.92■■□□□ 1.1
CMC1-204ENST00000423894 EID1Q9Y6B2 187 aa21.92■■□□□ 1.1
CMC1-204ENST00000423894 POLR1AO95602 1720 aaPredicted RBP21.92■■□□□ 1.1
CMC1-204ENST00000423894 SLIT1O75093 1534 aa21.9■■□□□ 1.1
CMC1-204ENST00000423894 IQSEC2Q5JU85 1478 aa21.9■■□□□ 1.1
CMC1-204ENST00000423894 CHGAP10645 457 aaKnown RBP21.88■■□□□ 1.09
CMC1-204ENST00000423894 SLC26A8Q96RN1 970 aa21.88■■□□□ 1.09
CMC1-204ENST00000423894 UNC13BO14795 1591 aa21.87■■□□□ 1.09
CMC1-204ENST00000423894 NUTM2DQ5VT03 806 aaPredicted RBP21.87■■□□□ 1.09
CMC1-204ENST00000423894 IQGAP1P46940 1657 aa21.86■■□□□ 1.09
CMC1-204ENST00000423894 RPRD2Q5VT52 1461 aaKnown RBP21.86■■□□□ 1.09
CMC1-204ENST00000423894 PIP4K2BP78356 416 aa21.86■■□□□ 1.09
CMC1-204ENST00000423894 NAIPQ13075 1403 aa21.84■■□□□ 1.09
CMC1-204ENST00000423894 TET3O43151 1660 aa21.83■■□□□ 1.09
CMC1-204ENST00000423894 CPS1P31327 1500 aa21.83■■□□□ 1.09
CMC1-204ENST00000423894 RBM33Q96EV2 1170 aaKnown RBP21.82■■□□□ 1.08
CMC1-204ENST00000423894 SCAF1Q9H7N4 1312 aaKnown RBP21.81■■□□□ 1.08
CMC1-204ENST00000423894 BCANQ96GW7 911 aa21.81■■□□□ 1.08
CMC1-204ENST00000423894 ADGRB3O60242 1522 aa21.8■■□□□ 1.08
CMC1-204ENST00000423894 LRRC7Q96NW7 1537 aa21.8■■□□□ 1.08
CMC1-204ENST00000423894 STRCP1A6NGW2 1772 aa21.8■■□□□ 1.08
CMC1-204ENST00000423894 E9PCH4 1651 aa21.79■■□□□ 1.08
CMC1-204ENST00000423894 IQGAP3Q86VI3 1631 aa21.78■■□□□ 1.08
CMC1-204ENST00000423894 TOM1O60784 492 aa21.78■■□□□ 1.08
CMC1-204ENST00000423894 TRIM52Q96A61 297 aa21.78■■□□□ 1.08
CMC1-204ENST00000423894 ZFYVE9O95405 1425 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms