RNA–Protein interactions for RNA: ENST00000422441.5

ITGA9-203, Transcript of integrin subunit alpha 9, humanhuman

TSL 1 (best) BASIC

Gene ITGA9, Length 2,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA9-203ENST00000422441 ROCK2O75116 1388 aaKnown RBP35.35■■■■□ 3.25
ITGA9-203ENST00000422441 CCDC144AA2RUR9 1427 aa35.34■■■■□ 3.25
ITGA9-203ENST00000422441 CLASP1Q7Z460 1538 aa35.33■■■■□ 3.25
ITGA9-203ENST00000422441 PLA2R1Q13018 1463 aa35.32■■■■□ 3.24
ITGA9-203ENST00000422441 ZCCHC11Q5TAX3 1644 aaKnown RBP35.32■■■■□ 3.24
ITGA9-203ENST00000422441 ST20-MTHFSA0A0A6YYL1 179 aa35.31■■■■□ 3.24
ITGA9-203ENST00000422441 PLCH2O75038 1416 aa35.31■■■■□ 3.24
ITGA9-203ENST00000422441 UHRF1BP1LA0JNW5 1464 aa35.3■■■■□ 3.24
ITGA9-203ENST00000422441 IQGAP3Q86VI3 1631 aa35.29■■■■□ 3.24
ITGA9-203ENST00000422441 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.29■■■■□ 3.24
ITGA9-203ENST00000422441 DUOX2Q9NRD8 1548 aa35.28■■■■□ 3.24
ITGA9-203ENST00000422441 PRAG1Q86YV5 1406 aa35.27■■■■□ 3.24
ITGA9-203ENST00000422441 TRPM1Q7Z4N2 1603 aa35.24■■■■□ 3.23
ITGA9-203ENST00000422441 EFCAB2Q5VUJ9 269 aa35.23■■■■□ 3.23
ITGA9-203ENST00000422441 IRX6P78412 446 aaPredicted RBP35.22■■■■□ 3.23
ITGA9-203ENST00000422441 MAGI2Q86UL8 1455 aa35.21■■■■□ 3.23
ITGA9-203ENST00000422441 CNGB1Q14028 1251 aaPredicted RBP35.21■■■■□ 3.23
ITGA9-203ENST00000422441 ERBINQ96RT1 1412 aa35.21■■■■□ 3.23
ITGA9-203ENST00000422441 RGL3Q3MIN7 710 aa35.18■■■■□ 3.22
ITGA9-203ENST00000422441 A2MP01023 1474 aa35.18■■■■□ 3.22
ITGA9-203ENST00000422441 ABCC1P33527 1531 aa35.18■■■■□ 3.22
ITGA9-203ENST00000422441 ERICH6BQ5W0A0 696 aa35.16■■■■□ 3.22
ITGA9-203ENST00000422441 ATP10AO60312 1499 aa35.16■■■■□ 3.22
ITGA9-203ENST00000422441 TRAPPC8Q9Y2L5 1435 aa35.14■■■■□ 3.22
ITGA9-203ENST00000422441 E9PCH4 1651 aa35.13■■■■□ 3.21
ITGA9-203ENST00000422441 GPRASP1Q5JY77 1395 aa35.13■■■■□ 3.21
ITGA9-203ENST00000422441 NBPF1Q3BBV0 1214 aa35.11■■■■□ 3.21
ITGA9-203ENST00000422441 PNISRQ8TF01 805 aaKnown RBP35.08■■■■□ 3.21
ITGA9-203ENST00000422441 LAMC1P11047 1609 aa35.07■■■■□ 3.2
ITGA9-203ENST00000422441 KTN1Q86UP2 1357 aaKnown RBP35.05■■■■□ 3.2
ITGA9-203ENST00000422441 ARAP3Q8WWN8 1544 aa35.04■■■■□ 3.2
ITGA9-203ENST00000422441 TMC1Q8TDI8 760 aa35.03■■■■□ 3.2
ITGA9-203ENST00000422441 PRDM15P57071 1507 aaPredicted RBP35.03■■■■□ 3.2
ITGA9-203ENST00000422441 SMG6Q86US8 1419 aaKnown RBP35.02■■■■□ 3.2
ITGA9-203ENST00000422441 RALBP1Q15311 655 aa35.02■■■■□ 3.2
ITGA9-203ENST00000422441 MYT1Q01538 1121 aa35.01■■■■□ 3.2
ITGA9-203ENST00000422441 PPP4R2Q9NY27 417 aa35.01■■■■□ 3.2
ITGA9-203ENST00000422441 EIF2AK4Q9P2K8 1649 aaKnown RBP35.01■■■■□ 3.19
ITGA9-203ENST00000422441 RTEL1-TNFRSF6BF6WH68 1400 aa35■■■■□ 3.19
ITGA9-203ENST00000422441 SPAG9O60271 1321 aaKnown RBP35■■■■□ 3.19
ITGA9-203ENST00000422441 MYBBP1AQ9BQG0 1328 aaKnown RBP34.99■■■■□ 3.19
ITGA9-203ENST00000422441 RBM19Q9Y4C8 960 aaKnown RBP34.99■■■■□ 3.19
ITGA9-203ENST00000422441 BRD4O60885 1362 aaPredicted RBP34.98■■■■□ 3.19
ITGA9-203ENST00000422441 AFAP1Q8N556 730 aa34.97■■■■□ 3.19
ITGA9-203ENST00000422441 ZFYVE16Q7Z3T8 1539 aa34.95■■■■□ 3.19
ITGA9-203ENST00000422441 TESK2Q96S53 571 aa34.94■■■■□ 3.18
ITGA9-203ENST00000422441 LRPPRCP42704 1394 aaKnown RBP34.94■■■■□ 3.18
ITGA9-203ENST00000422441 COL17A1Q9UMD9 1497 aaPredicted RBP34.94■■■■□ 3.18
ITGA9-203ENST00000422441 NUDCQ9Y266 331 aa34.92■■■■□ 3.18
ITGA9-203ENST00000422441 WDR7Q9Y4E6 1490 aa34.91■■■■□ 3.18
ITGA9-203ENST00000422441 PER1O15534 1290 aaPredicted RBP34.89■■■■□ 3.18
ITGA9-203ENST00000422441 DISP3Q9P2K9 1392 aa34.89■■■■□ 3.18
ITGA9-203ENST00000422441 PARD3Q8TEW0 1356 aa34.88■■■■□ 3.17
ITGA9-203ENST00000422441 RNF17Q9BXT8 1623 aaKnown RBP34.86■■■■□ 3.17
ITGA9-203ENST00000422441 DEPDC5O75140 1603 aa34.84■■■■□ 3.17
ITGA9-203ENST00000422441 ABCA9Q8IUA7 1624 aa34.84■■■■□ 3.17
ITGA9-203ENST00000422441 TRPM2O94759 1503 aa34.84■■■■□ 3.17
ITGA9-203ENST00000422441 FANCAO15360 1455 aa34.83■■■■□ 3.17
ITGA9-203ENST00000422441 PTPRTO14522 1441 aa34.82■■■■□ 3.16
ITGA9-203ENST00000422441 RNF123Q5XPI4 1314 aa34.81■■■■□ 3.16
ITGA9-203ENST00000422441 NLRP13Q86W25 1043 aa34.8■■■■□ 3.16
ITGA9-203ENST00000422441 INO80Q9ULG1 1556 aaPredicted RBP34.8■■■■□ 3.16
ITGA9-203ENST00000422441 ATP7AQ04656 1500 aa34.8■■■■□ 3.16
ITGA9-203ENST00000422441 MADDQ8WXG6 1647 aa34.79■■■■□ 3.16
ITGA9-203ENST00000422441 SENP3-EIF4A1A0A087X0R7 540 aa34.79■■■■□ 3.16
ITGA9-203ENST00000422441 TMF1P82094 1093 aa34.79■■■■□ 3.16
ITGA9-203ENST00000422441 WASHC2CQ9Y4E1 1318 aa34.78■■■■□ 3.16
ITGA9-203ENST00000422441 SPHKAPQ2M3C7 1700 aa34.78■■■■□ 3.16
ITGA9-203ENST00000422441 CEP152O94986 1710 aa34.77■■■■□ 3.16
ITGA9-203ENST00000422441 TET3O43151 1660 aa34.76■■■■□ 3.15
ITGA9-203ENST00000422441 B4GALNT3Q6L9W6 998 aa34.76■■■■□ 3.15
ITGA9-203ENST00000422441 VWDEQ8N2E2 1590 aa34.74■■■■□ 3.15
ITGA9-203ENST00000422441 CLTCL1P53675 1640 aa34.74■■■■□ 3.15
ITGA9-203ENST00000422441 PANK3Q9H999 370 aa34.74■■■■□ 3.15
ITGA9-203ENST00000422441 ADGRL1O94910 1474 aa34.71■■■■□ 3.15
ITGA9-203ENST00000422441 STAC3Q96MF2 364 aa34.71■■■■□ 3.15
ITGA9-203ENST00000422441 SCAPERQ9BY12 1400 aa34.71■■■■□ 3.15
ITGA9-203ENST00000422441 KANK1Q14678 1352 aa34.7■■■■□ 3.15
ITGA9-203ENST00000422441 IQGAP1P46940 1657 aa34.69■■■■□ 3.14
ITGA9-203ENST00000422441 ASXL2Q76L83 1435 aa34.67■■■■□ 3.14
ITGA9-203ENST00000422441 KIF3BO15066 747 aa34.66■■■■□ 3.14
ITGA9-203ENST00000422441 CC2D1BQ5T0F9 858 aaKnown RBP34.66■■■■□ 3.14
ITGA9-203ENST00000422441 MYT1LQ9UL68 1186 aa34.63■■■■□ 3.13
ITGA9-203ENST00000422441 ANP32EQ9BTT0 268 aa34.62■■■■□ 3.13
ITGA9-203ENST00000422441 MROH1Q8NDA8 1641 aa34.62■■■■□ 3.13
ITGA9-203ENST00000422441 SCAF11Q99590 1463 aaKnown RBP34.6■■■■□ 3.13
ITGA9-203ENST00000422441 NEURL4Q96JN8 1562 aa34.58■■■■□ 3.13
ITGA9-203ENST00000422441 INSRP06213 1382 aa34.55■■■■□ 3.12
ITGA9-203ENST00000422441 KIDINS220Q9ULH0 1771 aa34.53■■■■□ 3.12
ITGA9-203ENST00000422441 ZMYM4Q5VZL5 1548 aa34.52■■■■□ 3.12
ITGA9-203ENST00000422441 KIAA1210Q9ULL0 1709 aa34.52■■■■□ 3.12
ITGA9-203ENST00000422441 PDE3BQ13370 1112 aa34.52■■■■□ 3.12
ITGA9-203ENST00000422441 FANCIQ9NVI1 1328 aa34.5■■■■□ 3.11
ITGA9-203ENST00000422441 SALL2Q9Y467 1007 aaPredicted RBP34.5■■■■□ 3.11
ITGA9-203ENST00000422441 CDCA8Q53HL2 280 aa34.5■■■■□ 3.11
ITGA9-203ENST00000422441 BLMP54132 1417 aaPredicted RBP34.49■■■■□ 3.11
ITGA9-203ENST00000422441 UGGT1Q9NYU2 1555 aa34.48■■■■□ 3.11
ITGA9-203ENST00000422441 EFCAB6Q5THR3 1501 aa34.47■■■■□ 3.11
ITGA9-203ENST00000422441 SYNMO15061 1565 aa34.47■■■■□ 3.11
ITGA9-203ENST00000422441 ZNF518AQ6AHZ1 1483 aa34.45■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms