RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 EIF2AK4Q9P2K8 1649 aaKnown RBP13.35□□□□□ -0.27
MDC1-204ENST00000422266 ILDR1Q86SU0 546 aaPredicted RBP13.35□□□□□ -0.27
MDC1-204ENST00000422266 FBXO41Q8TF61 875 aa13.35□□□□□ -0.27
MDC1-204ENST00000422266 ANKRD30AQ9BXX3 1397 aa13.34□□□□□ -0.27
MDC1-204ENST00000422266 PTPRTO14522 1441 aa13.34□□□□□ -0.27
MDC1-204ENST00000422266 ERBINQ96RT1 1412 aa13.34□□□□□ -0.27
MDC1-204ENST00000422266 PZPP20742 1482 aa13.34□□□□□ -0.27
MDC1-204ENST00000422266 KIF15Q9NS87 1388 aa13.33□□□□□ -0.27
MDC1-204ENST00000422266 ABCC5O15440 1437 aa13.33□□□□□ -0.28
MDC1-204ENST00000422266 DAPK1P53355 1430 aa13.33□□□□□ -0.28
MDC1-204ENST00000422266 PKD2Q13563 968 aa13.33□□□□□ -0.28
MDC1-204ENST00000422266 TNRQ92752 1358 aa13.32□□□□□ -0.28
MDC1-204ENST00000422266 DNMT1P26358 1616 aaKnown RBP13.31□□□□□ -0.28
MDC1-204ENST00000422266 RNF17Q9BXT8 1623 aaKnown RBP13.31□□□□□ -0.28
MDC1-204ENST00000422266 NCOA1Q15788 1441 aa13.31□□□□□ -0.28
MDC1-204ENST00000422266 ZC3H13Q5T200 1668 aaKnown RBP13.31□□□□□ -0.28
MDC1-204ENST00000422266 PLA2R1Q13018 1463 aa13.31□□□□□ -0.28
MDC1-204ENST00000422266 RRP7BPQ9NSQ0 103 aa13.31□□□□□ -0.28
MDC1-204ENST00000422266 KANK1Q14678 1352 aa13.31□□□□□ -0.28
MDC1-204ENST00000422266 CEP170BQ9Y4F5 1589 aaPredicted RBP13.3□□□□□ -0.28
MDC1-204ENST00000422266 FAM50AQ14320 339 aaKnown RBP13.3□□□□□ -0.28
MDC1-204ENST00000422266 CROCC2H7BZ55 1655 aa13.3□□□□□ -0.28
MDC1-204ENST00000422266 ZNF142P52746 1687 aaPredicted RBP13.3□□□□□ -0.28
MDC1-204ENST00000422266 A2ML1A8K2U0 1454 aa13.29□□□□□ -0.28
MDC1-204ENST00000422266 NLRP1Q9C000 1473 aa13.29□□□□□ -0.28
MDC1-204ENST00000422266 MYO3AQ8NEV4 1616 aa13.29□□□□□ -0.28
MDC1-204ENST00000422266 THEMISQ8N1K5 641 aaPredicted RBP13.29□□□□□ -0.28
MDC1-204ENST00000422266 CAMSAP1Q5T5Y3 1602 aa13.28□□□□□ -0.28
MDC1-204ENST00000422266 STRCQ7RTU9 1775 aa13.28□□□□□ -0.28
MDC1-204ENST00000422266 CERKQ8TCT0 537 aa13.28□□□□□ -0.28
MDC1-204ENST00000422266 ABCC3O15438 1527 aa13.27□□□□□ -0.29
MDC1-204ENST00000422266 ADGRL2O95490 1459 aa13.26□□□□□ -0.29
MDC1-204ENST00000422266 FBXO31Q5XUX0 539 aaPredicted RBP13.26□□□□□ -0.29
MDC1-204ENST00000422266 CHIC2Q9UKJ5 165 aa13.26□□□□□ -0.29
MDC1-204ENST00000422266 ARHGAP31Q2M1Z3 1444 aa13.25□□□□□ -0.29
MDC1-204ENST00000422266 PRDM15P57071 1507 aaPredicted RBP13.24□□□□□ -0.29
MDC1-204ENST00000422266 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.24□□□□□ -0.29
MDC1-204ENST00000422266 ANKLE2Q86XL3 938 aa13.24□□□□□ -0.29
MDC1-204ENST00000422266 NCKAP5LQ9HCH0 1330 aa13.22□□□□□ -0.29
MDC1-204ENST00000422266 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.22□□□□□ -0.292e-7■■□□□ 13.4
MDC1-204ENST00000422266 SPATA31D1Q6ZQQ2 1576 aa13.22□□□□□ -0.29
MDC1-204ENST00000422266 UGGT1Q9NYU2 1555 aa13.22□□□□□ -0.29
MDC1-204ENST00000422266 ROCK1Q13464 1354 aa13.21□□□□□ -0.29
MDC1-204ENST00000422266 MROH1Q8NDA8 1641 aa13.21□□□□□ -0.29
MDC1-204ENST00000422266 ERVK-7P63135 1459 aa13.21□□□□□ -0.3
MDC1-204ENST00000422266 IQSEC2Q5JU85 1478 aa13.21□□□□□ -0.3
MDC1-204ENST00000422266 ANKRD50Q9ULJ7 1429 aa13.21□□□□□ -0.3
MDC1-204ENST00000422266 DEPDC5O75140 1603 aa13.21□□□□□ -0.3
MDC1-204ENST00000422266 LMTK2Q8IWU2 1503 aa13.19□□□□□ -0.3
MDC1-204ENST00000422266 CEP152O94986 1710 aa13.17□□□□□ -0.3
MDC1-204ENST00000422266 STAG3Q9UJ98 1225 aa13.17□□□□□ -0.3
MDC1-204ENST00000422266 SLC52A1Q9NWF4 448 aa13.16□□□□□ -0.3
MDC1-204ENST00000422266 EID1Q9Y6B2 187 aa13.16□□□□□ -0.3
MDC1-204ENST00000422266 RPRD2Q5VT52 1461 aaKnown RBP13.16□□□□□ -0.3
MDC1-204ENST00000422266 MED14O60244 1454 aa13.15□□□□□ -0.3
MDC1-204ENST00000422266 VWDEQ8N2E2 1590 aa13.15□□□□□ -0.3
MDC1-204ENST00000422266 LTBP4Q8N2S1 1624 aa13.14□□□□□ -0.31
MDC1-204ENST00000422266 POLR1AO95602 1720 aaPredicted RBP13.14□□□□□ -0.31
MDC1-204ENST00000422266 NPHP4O75161 1426 aaPredicted RBP13.13□□□□□ -0.31
MDC1-204ENST00000422266 ZNF335Q9H4Z2 1342 aaPredicted RBP13.13□□□□□ -0.31
MDC1-204ENST00000422266 HDGFP51858 240 aaKnown RBP13.12□□□□□ -0.31
MDC1-204ENST00000422266 CPS1P31327 1500 aa13.12□□□□□ -0.31
MDC1-204ENST00000422266 EFCAB6Q5THR3 1501 aa13.12□□□□□ -0.31
MDC1-204ENST00000422266 ITGAEP38570 1179 aa13.11□□□□□ -0.31
MDC1-204ENST00000422266 RRBP1Q9P2E9 1410 aaKnown RBP13.11□□□□□ -0.31
MDC1-204ENST00000422266 CFAP65Q6ZU64 1925 aaKnown RBP13.11□□□□□ -0.31
MDC1-204ENST00000422266 SCAF11Q99590 1463 aaKnown RBP13.1□□□□□ -0.31
MDC1-204ENST00000422266 KDM5AP29375 1690 aaKnown RBP13.1□□□□□ -0.31
MDC1-204ENST00000422266 TXNDC2Q86VQ3 553 aa13.1□□□□□ -0.31
MDC1-204ENST00000422266 NOS1P29475 1434 aa13.1□□□□□ -0.31
MDC1-204ENST00000422266 SLIT1O75093 1534 aa13.09□□□□□ -0.31
MDC1-204ENST00000422266 IDI1Q13907 227 aa13.09□□□□□ -0.31
MDC1-204ENST00000422266 PPARGC1BQ86YN6 1023 aaKnown RBP13.09□□□□□ -0.31
MDC1-204ENST00000422266 NEURL4Q96JN8 1562 aa13.09□□□□□ -0.31
MDC1-204ENST00000422266 TMEM2Q9UHN6 1383 aa13.08□□□□□ -0.31
MDC1-204ENST00000422266 UBR1Q8IWV7 1749 aa13.08□□□□□ -0.32
MDC1-204ENST00000422266 ARHGAP23Q9P227 1491 aa13.08□□□□□ -0.32
MDC1-204ENST00000422266 TET3O43151 1660 aa13.08□□□□□ -0.32
MDC1-204ENST00000422266 UNC13BO14795 1591 aa13.07□□□□□ -0.32
MDC1-204ENST00000422266 IQGAP1P46940 1657 aa13.07□□□□□ -0.32
MDC1-204ENST00000422266 NUP155O75694 1391 aa13.07□□□□□ -0.32
MDC1-204ENST00000422266 TOM1O60784 492 aa13.06□□□□□ -0.32
MDC1-204ENST00000422266 UBAP1LF5GYI3 381 aa13.05□□□□□ -0.32
MDC1-204ENST00000422266 GCC2Q8IWJ2 1684 aa13.05□□□□□ -0.32
MDC1-204ENST00000422266 PIK3C2BO00750 1634 aa13.04□□□□□ -0.32
MDC1-204ENST00000422266 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.04□□□□□ -0.32
MDC1-204ENST00000422266 ACIN1Q9UKV3 1341 aaKnown RBP13.04□□□□□ -0.32
MDC1-204ENST00000422266 ADGRB3O60242 1522 aa13.03□□□□□ -0.32
MDC1-204ENST00000422266 IQGAP3Q86VI3 1631 aa13.03□□□□□ -0.32
MDC1-204ENST00000422266 LTKP29376 864 aa13.03□□□□□ -0.32
MDC1-204ENST00000422266 SYNMO15061 1565 aa13.03□□□□□ -0.32
MDC1-204ENST00000422266 PPP1R15AO75807 674 aaPredicted RBP13□□□□□ -0.33
MDC1-204ENST00000422266 BCANQ96GW7 911 aa13□□□□□ -0.33
MDC1-204ENST00000422266 HFM1A2PYH4 1435 aa12.99□□□□□ -0.33
MDC1-204ENST00000422266 CHGAP10645 457 aaKnown RBP12.99□□□□□ -0.33
MDC1-204ENST00000422266 NAIPQ13075 1403 aa12.98□□□□□ -0.33
MDC1-204ENST00000422266 PLEKHG1Q9ULL1 1385 aa12.97□□□□□ -0.33
MDC1-204ENST00000422266 E9PCH4 1651 aa12.97□□□□□ -0.33
MDC1-204ENST00000422266 KCNA6P17658 529 aa12.97□□□□□ -0.33
MDC1-204ENST00000422266 RIMS2Q9UQ26 1411 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms