RNA–Protein interactions for RNA: ENST00000422143.2

TRBV29-1-201, Transcript of T cell receptor beta variable 29-1, humanhuman

APPRIS P1 BASIC

Gene TRBV29-1, Length 402 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV29-1-201ENST00000422143 CEP162Q5TB80 1403 aa8.37□□□□□ -1.07
TRBV29-1-201ENST00000422143 E2F4Q16254 413 aa8.36□□□□□ -1.07
TRBV29-1-201ENST00000422143 MS4A4AQ96JQ5 239 aa8.36□□□□□ -1.07
TRBV29-1-201ENST00000422143 MAPKBP1O60336 1514 aa8.35□□□□□ -1.07
TRBV29-1-201ENST00000422143 ABCC10Q5T3U5 1492 aa8.35□□□□□ -1.07
TRBV29-1-201ENST00000422143 KCNH8Q96L42 1107 aa8.35□□□□□ -1.07
TRBV29-1-201ENST00000422143 ILDR1Q86SU0 546 aaPredicted RBP8.34□□□□□ -1.07
TRBV29-1-201ENST00000422143 ATP1B4Q9UN42 357 aaPredicted RBP8.34□□□□□ -1.07
TRBV29-1-201ENST00000422143 FMN1Q68DA7 1419 aa8.34□□□□□ -1.07
TRBV29-1-201ENST00000422143 TTLL13PA6NNM8 815 aa8.33□□□□□ -1.08
TRBV29-1-201ENST00000422143 TRPC6Q9Y210 931 aa8.33□□□□□ -1.08
TRBV29-1-201ENST00000422143 TULP1O00294 542 aaPredicted RBP8.32□□□□□ -1.08
TRBV29-1-201ENST00000422143 MFSD10Q14728 455 aa8.32□□□□□ -1.08
TRBV29-1-201ENST00000422143 EPRSP07814 1512 aaKnown RBP8.32□□□□□ -1.08
TRBV29-1-201ENST00000422143 CASKIN1Q8WXD9 1431 aa8.31□□□□□ -1.08
TRBV29-1-201ENST00000422143 PLEKHD1A6NEE1 506 aa8.31□□□□□ -1.08
TRBV29-1-201ENST00000422143 CRISPLD2Q9H0B8 497 aa8.31□□□□□ -1.08
TRBV29-1-201ENST00000422143 ZCCHC11Q5TAX3 1644 aaKnown RBP8.31□□□□□ -1.08
TRBV29-1-201ENST00000422143 RAPGEF6Q8TEU7 1601 aa8.31□□□□□ -1.08
TRBV29-1-201ENST00000422143 WDR7Q9Y4E6 1490 aa8.31□□□□□ -1.08
TRBV29-1-201ENST00000422143 NCKAP5LQ9HCH0 1330 aa8.3□□□□□ -1.08
TRBV29-1-201ENST00000422143 CDK13Q14004 1512 aaKnown RBP8.3□□□□□ -1.08
TRBV29-1-201ENST00000422143 LARP6Q9BRS8 491 aaKnown RBP8.3□□□□□ -1.08
TRBV29-1-201ENST00000422143 BMP2KQ9NSY1 1161 aaPredicted RBP8.3□□□□□ -1.08
TRBV29-1-201ENST00000422143 ARIH1Q9Y4X5 557 aaPredicted RBP8.3□□□□□ -1.08
TRBV29-1-201ENST00000422143 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.29□□□□□ -1.08
TRBV29-1-201ENST00000422143 DIP2BQ9P265 1576 aa8.29□□□□□ -1.08
TRBV29-1-201ENST00000422143 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.28□□□□□ -1.08
TRBV29-1-201ENST00000422143 HAX1O00165 279 aa8.27□□□□□ -1.09
TRBV29-1-201ENST00000422143 DDX27Q96GQ7 796 aaKnown RBP8.27□□□□□ -1.09
TRBV29-1-201ENST00000422143 TRIM35Q9UPQ4 493 aa8.27□□□□□ -1.09
TRBV29-1-201ENST00000422143 GLI2P10070 1586 aa8.27□□□□□ -1.09
TRBV29-1-201ENST00000422143 GALR2O43603 387 aaPredicted RBP8.26□□□□□ -1.09
TRBV29-1-201ENST00000422143 VPS8Q8N3P4 1428 aa8.26□□□□□ -1.09
TRBV29-1-201ENST00000422143 PCF11O94913 1555 aaKnown RBP8.26□□□□□ -1.09
TRBV29-1-201ENST00000422143 FYCO1Q9BQS8 1478 aa8.26□□□□□ -1.09
TRBV29-1-201ENST00000422143 COL17A1Q9UMD9 1497 aaPredicted RBP8.26□□□□□ -1.09
TRBV29-1-201ENST00000422143 MAGI3Q5TCQ9 1506 aa8.25□□□□□ -1.09
TRBV29-1-201ENST00000422143 CAMK2BQ13554 666 aa8.25□□□□□ -1.09
TRBV29-1-201ENST00000422143 KANK4Q5T7N3 995 aaPredicted RBP8.25□□□□□ -1.09
TRBV29-1-201ENST00000422143 LMOD2Q6P5Q4 547 aa8.25□□□□□ -1.09
TRBV29-1-201ENST00000422143 CD109Q6YHK3 1445 aa8.25□□□□□ -1.09
TRBV29-1-201ENST00000422143 TROQ12816 1431 aaPredicted RBP8.24□□□□□ -1.09
TRBV29-1-201ENST00000422143 CDK11AQ9UQ88 783 aaPredicted RBP8.24□□□□□ -1.09
TRBV29-1-201ENST00000422143 KIF13AQ9H1H9 1805 aa8.24□□□□□ -1.09
TRBV29-1-201ENST00000422143 HECW1Q76N89 1606 aa8.23□□□□□ -1.09
TRBV29-1-201ENST00000422143 TESPA1A2RU30 521 aaPredicted RBP8.23□□□□□ -1.09
TRBV29-1-201ENST00000422143 IER5LQ5T953 404 aa8.23□□□□□ -1.09
TRBV29-1-201ENST00000422143 GPHNQ9NQX3 736 aaPredicted RBP8.23□□□□□ -1.09
TRBV29-1-201ENST00000422143 SMYD5Q6GMV2 418 aa8.22□□□□□ -1.09
TRBV29-1-201ENST00000422143 LRRIQ1Q96JM4 1722 aa8.21□□□□□ -1.09
TRBV29-1-201ENST00000422143 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.21□□□□□ -1.1
TRBV29-1-201ENST00000422143 CCDC18Q5T9S5 1454 aa8.2□□□□□ -1.1
TRBV29-1-201ENST00000422143 ASTLQ6HA08 431 aaPredicted RBP8.2□□□□□ -1.1
TRBV29-1-201ENST00000422143 OCEL1Q9H607 264 aa8.2□□□□□ -1.1
TRBV29-1-201ENST00000422143 MAP3K4Q9Y6R4 1608 aa8.2□□□□□ -1.1
TRBV29-1-201ENST00000422143 PPRC1Q5VV67 1664 aaKnown RBP8.2□□□□□ -1.1
TRBV29-1-201ENST00000422143 PLCH2O75038 1416 aa8.2□□□□□ -1.1
TRBV29-1-201ENST00000422143 SEMA3EO15041 775 aa8.19□□□□□ -1.1
TRBV29-1-201ENST00000422143 ATMINO43313 823 aaPredicted RBP8.19□□□□□ -1.1
TRBV29-1-201ENST00000422143 RAPGEF3O95398 923 aa8.19□□□□□ -1.1
TRBV29-1-201ENST00000422143 PPP1R15BQ5SWA1 713 aa8.19□□□□□ -1.1
TRBV29-1-201ENST00000422143 ABCA9Q8IUA7 1624 aa8.18□□□□□ -1.1
TRBV29-1-201ENST00000422143 ATN1P54259 1190 aaPredicted RBP8.18□□□□□ -1.1
TRBV29-1-201ENST00000422143 IRX5P78411 483 aaPredicted RBP8.18□□□□□ -1.1
TRBV29-1-201ENST00000422143 EVX2Q03828 476 aa8.18□□□□□ -1.1
TRBV29-1-201ENST00000422143 MICALL2Q8IY33 904 aa8.18□□□□□ -1.1
TRBV29-1-201ENST00000422143 PDCD7Q8N8D1 485 aaKnown RBP8.18□□□□□ -1.1
TRBV29-1-201ENST00000422143 MTUS2Q5JR59 1369 aa8.18□□□□□ -1.1
TRBV29-1-201ENST00000422143 TTC37Q6PGP7 1564 aa8.18□□□□□ -1.1
TRBV29-1-201ENST00000422143 KIF14Q15058 1648 aa8.18□□□□□ -1.1
TRBV29-1-201ENST00000422143 TMEM121BQ9BXQ6 578 aaPredicted RBP8.17□□□□□ -1.1
TRBV29-1-201ENST00000422143 ZNF644Q9H582 1327 aaPredicted RBP8.17□□□□□ -1.1
TRBV29-1-201ENST00000422143 GPATCH8Q9UKJ3 1502 aaKnown RBP8.17□□□□□ -1.1
TRBV29-1-201ENST00000422143 EFCAB2Q5VUJ9 269 aa8.16□□□□□ -1.1
TRBV29-1-201ENST00000422143 DPY19L2Q6NUT2 758 aa8.16□□□□□ -1.1
TRBV29-1-201ENST00000422143 LRRC9Q6ZRR7 1453 aa8.16□□□□□ -1.1
TRBV29-1-201ENST00000422143 AKNAQ7Z591 1439 aa8.16□□□□□ -1.1
TRBV29-1-201ENST00000422143 TEX14Q8IWB6 1497 aa8.16□□□□□ -1.1
TRBV29-1-201ENST00000422143 TSPOAP1O95153 1857 aa8.15□□□□□ -1.1
TRBV29-1-201ENST00000422143 TIAM1Q13009 1591 aa8.15□□□□□ -1.1
TRBV29-1-201ENST00000422143 MAP3K1Q13233 1512 aa8.15□□□□□ -1.1
TRBV29-1-201ENST00000422143 PHLDB1Q86UU1 1377 aa8.15□□□□□ -1.1
TRBV29-1-201ENST00000422143 G3V3G9 751 aa8.15□□□□□ -1.1
TRBV29-1-201ENST00000422143 FOXK1P85037 733 aa8.15□□□□□ -1.1
TRBV29-1-201ENST00000422143 AFAP1Q8N556 730 aa8.15□□□□□ -1.1
TRBV29-1-201ENST00000422143 TMC2Q8TDI7 906 aa8.15□□□□□ -1.1
TRBV29-1-201ENST00000422143 BOLA1Q9Y3E2 137 aa8.15□□□□□ -1.1
TRBV29-1-201ENST00000422143 ARAP3Q8WWN8 1544 aa8.14□□□□□ -1.11
TRBV29-1-201ENST00000422143 FANCAO15360 1455 aa8.14□□□□□ -1.11
TRBV29-1-201ENST00000422143 NEO1Q92859 1461 aa8.14□□□□□ -1.11
TRBV29-1-201ENST00000422143 SPDYE16A6NNV3 312 aaPredicted RBP8.14□□□□□ -1.11
TRBV29-1-201ENST00000422143 PPARGC1BQ86YN6 1023 aaKnown RBP8.14□□□□□ -1.11
TRBV29-1-201ENST00000422143 L3MBTL3Q96JM7 780 aaPredicted RBP8.14□□□□□ -1.11
TRBV29-1-201ENST00000422143 CFDP1Q9UEE9 299 aaPredicted RBP8.14□□□□□ -1.11
TRBV29-1-201ENST00000422143 CFAP43Q8NDM7 1665 aa8.14□□□□□ -1.11
TRBV29-1-201ENST00000422143 SCAPERQ9BY12 1400 aa8.13□□□□□ -1.11
TRBV29-1-201ENST00000422143 CCNB3Q8WWL7 1395 aa8.13□□□□□ -1.11
TRBV29-1-201ENST00000422143 PLCG2P16885 1265 aa8.13□□□□□ -1.11
TRBV29-1-201ENST00000422143 ZC3H15Q8WU90 426 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms