RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.37■■□□□ 1.17
CTSB-203ENST00000420692 DUOX2Q9NRD8 1548 aa22.37■■□□□ 1.17
CTSB-203ENST00000420692 CARD11Q9BXL7 1154 aa22.35■■□□□ 1.17
CTSB-203ENST00000420692 MAGI2Q86UL8 1455 aa22.35■■□□□ 1.17
CTSB-203ENST00000420692 CCDC144AA2RUR9 1427 aa22.33■■□□□ 1.17
CTSB-203ENST00000420692 ARID4BQ4LE39 1312 aaPredicted RBP22.32■■□□□ 1.16
CTSB-203ENST00000420692 ERBINQ96RT1 1412 aa22.32■■□□□ 1.16
CTSB-203ENST00000420692 BCANQ96GW7 911 aa22.31■■□□□ 1.16
CTSB-203ENST00000420692 PRAG1Q86YV5 1406 aa22.3■■□□□ 1.16
CTSB-203ENST00000420692 ST20-MTHFSA0A0A6YYL1 179 aa22.3■■□□□ 1.16
CTSB-203ENST00000420692 MRS2Q9HD23 443 aa22.3■■□□□ 1.16
CTSB-203ENST00000420692 TRPM1Q7Z4N2 1603 aa22.29■■□□□ 1.16
CTSB-203ENST00000420692 POLR3GLQ9BT43 218 aa22.29■■□□□ 1.16
CTSB-203ENST00000420692 A2MP01023 1474 aa22.29■■□□□ 1.16
CTSB-203ENST00000420692 ARAP3Q8WWN8 1544 aa22.28■■□□□ 1.16
CTSB-203ENST00000420692 ATP10AO60312 1499 aa22.28■■□□□ 1.16
CTSB-203ENST00000420692 RGL3Q3MIN7 710 aa22.27■■□□□ 1.16
CTSB-203ENST00000420692 FAM9BQ8IZU0 186 aa22.27■■□□□ 1.16
CTSB-203ENST00000420692 AFAP1Q8N556 730 aa22.27■■□□□ 1.16
CTSB-203ENST00000420692 ROCK2O75116 1388 aaKnown RBP22.25■■□□□ 1.15
CTSB-203ENST00000420692 WDR7Q9Y4E6 1490 aa22.25■■□□□ 1.15
CTSB-203ENST00000420692 NBPF1Q3BBV0 1214 aa22.25■■□□□ 1.15
CTSB-203ENST00000420692 ZFYVE16Q7Z3T8 1539 aa22.23■■□□□ 1.15
CTSB-203ENST00000420692 SPAG9O60271 1321 aaKnown RBP22.22■■□□□ 1.15
CTSB-203ENST00000420692 RTEL1-TNFRSF6BF6WH68 1400 aa22.22■■□□□ 1.15
CTSB-203ENST00000420692 ABCA9Q8IUA7 1624 aa22.21■■□□□ 1.15
CTSB-203ENST00000420692 GPRASP1Q5JY77 1395 aa22.21■■□□□ 1.15
CTSB-203ENST00000420692 NEFLP07196 543 aa22.21■■□□□ 1.15
CTSB-203ENST00000420692 CNGB1Q14028 1251 aaPredicted RBP22.19■■□□□ 1.14
CTSB-203ENST00000420692 E9PCH4 1651 aa22.18■■□□□ 1.14
CTSB-203ENST00000420692 TSHZ2Q9NRE2 1034 aa22.18■■□□□ 1.14
CTSB-203ENST00000420692 FANCAO15360 1455 aa22.17■■□□□ 1.14
CTSB-203ENST00000420692 ZBED9Q6R2W3 1325 aa22.16■■□□□ 1.14
CTSB-203ENST00000420692 LAMC1P11047 1609 aa22.15■■□□□ 1.14
CTSB-203ENST00000420692 DEPDC5O75140 1603 aa22.14■■□□□ 1.14
CTSB-203ENST00000420692 INO80Q9ULG1 1556 aaPredicted RBP22.14■■□□□ 1.13
CTSB-203ENST00000420692 PRDM15P57071 1507 aaPredicted RBP22.14■■□□□ 1.13
CTSB-203ENST00000420692 ASXL2Q76L83 1435 aa22.13■■□□□ 1.13
CTSB-203ENST00000420692 ATP7AQ04656 1500 aa22.12■■□□□ 1.13
CTSB-203ENST00000420692 TESK2Q96S53 571 aa22.11■■□□□ 1.13
CTSB-203ENST00000420692 PTPRTO14522 1441 aa22.09■■□□□ 1.13
CTSB-203ENST00000420692 SCAPERQ9BY12 1400 aa22.09■■□□□ 1.13
CTSB-203ENST00000420692 EIF2AK4Q9P2K8 1649 aaKnown RBP22.09■■□□□ 1.13
CTSB-203ENST00000420692 ADGRL1O94910 1474 aa22.08■■□□□ 1.13
CTSB-203ENST00000420692 TRPM2O94759 1503 aa22.08■■□□□ 1.13
CTSB-203ENST00000420692 VWDEQ8N2E2 1590 aa22.08■■□□□ 1.13
CTSB-203ENST00000420692 IRX6P78412 446 aaPredicted RBP22.08■■□□□ 1.13
CTSB-203ENST00000420692 PNISRQ8TF01 805 aaKnown RBP22.08■■□□□ 1.13
CTSB-203ENST00000420692 RNF17Q9BXT8 1623 aaKnown RBP22.07■■□□□ 1.12
CTSB-203ENST00000420692 SPHKAPQ2M3C7 1700 aa22.07■■□□□ 1.12
CTSB-203ENST00000420692 DISP3Q9P2K9 1392 aa22.06■■□□□ 1.12
CTSB-203ENST00000420692 COL17A1Q9UMD9 1497 aaPredicted RBP22.06■■□□□ 1.12
CTSB-203ENST00000420692 TET3O43151 1660 aa22.05■■□□□ 1.12
CTSB-203ENST00000420692 CLTCL1P53675 1640 aa22.05■■□□□ 1.12
CTSB-203ENST00000420692 PER1O15534 1290 aaPredicted RBP22.04■■□□□ 1.12
CTSB-203ENST00000420692 MROH1Q8NDA8 1641 aa22.04■■□□□ 1.12
CTSB-203ENST00000420692 CEP152O94986 1710 aa22.04■■□□□ 1.12
CTSB-203ENST00000420692 MADDQ8WXG6 1647 aa22.04■■□□□ 1.12
CTSB-203ENST00000420692 KIF3BO15066 747 aa22.02■■□□□ 1.11
CTSB-203ENST00000420692 KIDINS220Q9ULH0 1771 aa22.01■■□□□ 1.11
CTSB-203ENST00000420692 RALBP1Q15311 655 aa22■■□□□ 1.11
CTSB-203ENST00000420692 OSCARQ8IYS5 282 aa22■■□□□ 1.11
CTSB-203ENST00000420692 KTN1Q86UP2 1357 aaKnown RBP22■■□□□ 1.11
CTSB-203ENST00000420692 MYBBP1AQ9BQG0 1328 aaKnown RBP22■■□□□ 1.11
CTSB-203ENST00000420692 TMC1Q8TDI8 760 aa21.99■■□□□ 1.11
CTSB-203ENST00000420692 LRPPRCP42704 1394 aaKnown RBP21.99■■□□□ 1.11
CTSB-203ENST00000420692 BRD4O60885 1362 aaPredicted RBP21.98■■□□□ 1.11
CTSB-203ENST00000420692 PARD3Q8TEW0 1356 aa21.98■■□□□ 1.11
CTSB-203ENST00000420692 IQGAP1P46940 1657 aa21.96■■□□□ 1.11
CTSB-203ENST00000420692 KANK1Q14678 1352 aa21.96■■□□□ 1.11
CTSB-203ENST00000420692 SMG6Q86US8 1419 aaKnown RBP21.95■■□□□ 1.11
CTSB-203ENST00000420692 SENP3-EIF4A1A0A087X0R7 540 aa21.95■■□□□ 1.1
CTSB-203ENST00000420692 MYT1LQ9UL68 1186 aa21.95■■□□□ 1.1
CTSB-203ENST00000420692 UGGT1Q9NYU2 1555 aa21.93■■□□□ 1.1
CTSB-203ENST00000420692 TMF1P82094 1093 aa21.92■■□□□ 1.1
CTSB-203ENST00000420692 PANK3Q9H999 370 aa21.92■■□□□ 1.1
CTSB-203ENST00000420692 ERICH6BQ5W0A0 696 aa21.91■■□□□ 1.1
CTSB-203ENST00000420692 ZNF518AQ6AHZ1 1483 aa21.91■■□□□ 1.1
CTSB-203ENST00000420692 NPM1P06748 294 aaKnown RBP eCLIP21.9■■□□□ 1.1
CTSB-203ENST00000420692 NEURL4Q96JN8 1562 aa21.9■■□□□ 1.1
CTSB-203ENST00000420692 EFCAB6Q5THR3 1501 aa21.89■■□□□ 1.1
CTSB-203ENST00000420692 CD109Q6YHK3 1445 aa21.89■■□□□ 1.1
CTSB-203ENST00000420692 PPRC1Q5VV67 1664 aaKnown RBP21.89■■□□□ 1.1
CTSB-203ENST00000420692 STAC3Q96MF2 364 aa21.89■■□□□ 1.09
CTSB-203ENST00000420692 NLRP13Q86W25 1043 aa21.88■■□□□ 1.09
CTSB-203ENST00000420692 NUDCQ9Y266 331 aa21.88■■□□□ 1.09
CTSB-203ENST00000420692 WASHC2CQ9Y4E1 1318 aa21.87■■□□□ 1.09
CTSB-203ENST00000420692 SCAF11Q99590 1463 aaKnown RBP21.86■■□□□ 1.09
CTSB-203ENST00000420692 FRMPD1Q5SYB0 1578 aa21.86■■□□□ 1.09
CTSB-203ENST00000420692 POGZQ7Z3K3 1410 aa21.86■■□□□ 1.09
CTSB-203ENST00000420692 LMTK2Q8IWU2 1503 aa21.86■■□□□ 1.09
CTSB-203ENST00000420692 CC2D1BQ5T0F9 858 aaKnown RBP21.86■■□□□ 1.09
CTSB-203ENST00000420692 PPP4R2Q9NY27 417 aa21.85■■□□□ 1.09
CTSB-203ENST00000420692 RNF123Q5XPI4 1314 aa21.85■■□□□ 1.09
CTSB-203ENST00000420692 KIAA1210Q9ULL0 1709 aa21.85■■□□□ 1.09
CTSB-203ENST00000420692 MLH3Q9UHC1 1453 aa21.83■■□□□ 1.09
CTSB-203ENST00000420692 MROH2AA6NES4 1674 aa21.83■■□□□ 1.08
CTSB-203ENST00000420692 KIF1BO60333 1816 aa21.83■■□□□ 1.08
CTSB-203ENST00000420692 MAP3K4Q9Y6R4 1608 aa21.82■■□□□ 1.08
CTSB-203ENST00000420692 IFT172Q9UG01 1749 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms