RNA–Protein interactions for RNA: ENST00000419744.1

ATRAID-203, Transcript of all-trans retinoic acid induced differentiation factor, humanhuman

TSL 2

Gene ATRAID, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRAID-203ENST00000419744 MED1Q15648 1581 aaPredicted RBP13.04□□□□□ -0.32
ATRAID-203ENST00000419744 TCOF1Q13428 1488 aaKnown RBP13.04□□□□□ -0.32
ATRAID-203ENST00000419744 RANGAP1P46060 587 aaPredicted RBP13.03□□□□□ -0.32
ATRAID-203ENST00000419744 ZNF335Q9H4Z2 1342 aaPredicted RBP13.02□□□□□ -0.33
ATRAID-203ENST00000419744 FMN1Q68DA7 1419 aa13.02□□□□□ -0.33
ATRAID-203ENST00000419744 CEP170BQ9Y4F5 1589 aaPredicted RBP13□□□□□ -0.33
ATRAID-203ENST00000419744 PLXNC1O60486 1568 aa12.99□□□□□ -0.33
ATRAID-203ENST00000419744 ARHGAP35Q9NRY4 1499 aa12.99□□□□□ -0.33
ATRAID-203ENST00000419744 CLIP1P30622 1438 aa12.98□□□□□ -0.33
ATRAID-203ENST00000419744 SUPT6HQ7KZ85 1726 aaKnown RBP12.98□□□□□ -0.33
ATRAID-203ENST00000419744 SAMD9LQ8IVG5 1584 aa12.98□□□□□ -0.33
ATRAID-203ENST00000419744 CDC42BPAQ5VT25 1732 aa12.97□□□□□ -0.33
ATRAID-203ENST00000419744 CLTCQ00610 1675 aaKnown RBP12.97□□□□□ -0.33
ATRAID-203ENST00000419744 UBAP1LF5GYI3 381 aa12.97□□□□□ -0.33
ATRAID-203ENST00000419744 STAG3Q9UJ98 1225 aa12.97□□□□□ -0.33
ATRAID-203ENST00000419744 ZMYM3Q14202 1370 aa12.95□□□□□ -0.34
ATRAID-203ENST00000419744 NCKAP5LQ9HCH0 1330 aa12.95□□□□□ -0.34
ATRAID-203ENST00000419744 CDK11AQ9UQ88 783 aaPredicted RBP12.95□□□□□ -0.34
ATRAID-203ENST00000419744 PTPRKQ15262 1439 aa12.95□□□□□ -0.34
ATRAID-203ENST00000419744 INO80Q9ULG1 1556 aaPredicted RBP12.94□□□□□ -0.34
ATRAID-203ENST00000419744 REM2Q8IYK8 340 aaPredicted RBP12.94□□□□□ -0.34
ATRAID-203ENST00000419744 ESF1Q9H501 851 aaKnown RBP12.94□□□□□ -0.34
ATRAID-203ENST00000419744 ALKQ9UM73 1620 aa12.94□□□□□ -0.34
ATRAID-203ENST00000419744 NEURL4Q96JN8 1562 aa12.94□□□□□ -0.34
ATRAID-203ENST00000419744 PKD2Q13563 968 aa12.93□□□□□ -0.34
ATRAID-203ENST00000419744 POLR1AO95602 1720 aaPredicted RBP12.93□□□□□ -0.34
ATRAID-203ENST00000419744 CPS1P31327 1500 aa12.92□□□□□ -0.34
ATRAID-203ENST00000419744 SYCP2Q9BX26 1530 aa12.92□□□□□ -0.34
ATRAID-203ENST00000419744 DNMT1P26358 1616 aaKnown RBP12.91□□□□□ -0.34
ATRAID-203ENST00000419744 HSPA1LP34931 641 aa12.91□□□□□ -0.34
ATRAID-203ENST00000419744 SPDYE1Q8NFV5 336 aaPredicted RBP12.91□□□□□ -0.34
ATRAID-203ENST00000419744 MYT1LQ9UL68 1186 aa12.91□□□□□ -0.34
ATRAID-203ENST00000419744 ATP7AQ04656 1500 aa12.91□□□□□ -0.34
ATRAID-203ENST00000419744 VASPP50552 380 aaPredicted RBP12.9□□□□□ -0.34
ATRAID-203ENST00000419744 A2ML1A8K2U0 1454 aa12.89□□□□□ -0.35
ATRAID-203ENST00000419744 CCDC18Q5T9S5 1454 aa12.89□□□□□ -0.35
ATRAID-203ENST00000419744 VWDEQ8N2E2 1590 aa12.88□□□□□ -0.35
ATRAID-203ENST00000419744 A2MP01023 1474 aa12.87□□□□□ -0.35
ATRAID-203ENST00000419744 SHANK2Q9UPX8 1470 aa12.86□□□□□ -0.35
ATRAID-203ENST00000419744 ATP1B4Q9UN42 357 aaPredicted RBP12.86□□□□□ -0.35
ATRAID-203ENST00000419744 ADGBQ8N7X0 1667 aa12.85□□□□□ -0.35
ATRAID-203ENST00000419744 CASKIN1Q8WXD9 1431 aa12.85□□□□□ -0.35
ATRAID-203ENST00000419744 GPATCH8Q9UKJ3 1502 aaKnown RBP12.84□□□□□ -0.35
ATRAID-203ENST00000419744 KIAA1107Q9UPP5 1409 aa12.84□□□□□ -0.35
ATRAID-203ENST00000419744 CLEC11AQ9Y240 323 aa12.83□□□□□ -0.36
ATRAID-203ENST00000419744 SPAG9O60271 1321 aaKnown RBP12.83□□□□□ -0.36
ATRAID-203ENST00000419744 DEPDC5O75140 1603 aa12.82□□□□□ -0.36
ATRAID-203ENST00000419744 TOM1O60784 492 aa12.81□□□□□ -0.36
ATRAID-203ENST00000419744 PIP4K2BP78356 416 aa12.81□□□□□ -0.36
ATRAID-203ENST00000419744 FAM135AQ9P2D6 1515 aa12.81□□□□□ -0.36
ATRAID-203ENST00000419744 STRCP1A6NGW2 1772 aa12.81□□□□□ -0.36
ATRAID-203ENST00000419744 RNF17Q9BXT8 1623 aaKnown RBP12.8□□□□□ -0.36
ATRAID-203ENST00000419744 MED14O60244 1454 aa12.8□□□□□ -0.36
ATRAID-203ENST00000419744 PLEKHH2Q8IVE3 1493 aa12.8□□□□□ -0.36
ATRAID-203ENST00000419744 SYNMO15061 1565 aa12.8□□□□□ -0.36
ATRAID-203ENST00000419744 PZPP20742 1482 aa12.79□□□□□ -0.36
ATRAID-203ENST00000419744 FYCO1Q9BQS8 1478 aa12.79□□□□□ -0.36
ATRAID-203ENST00000419744 PITPNM1O00562 1244 aa12.78□□□□□ -0.36
ATRAID-203ENST00000419744 KDM5DQ9BY66 1539 aa12.78□□□□□ -0.36
ATRAID-203ENST00000419744 IQGAP1P46940 1657 aa12.77□□□□□ -0.36
ATRAID-203ENST00000419744 HNRNPMP52272 730 aaKnown RBP eCLIP12.76□□□□□ -0.37
ATRAID-203ENST00000419744 GGT6Q6P531 493 aa12.76□□□□□ -0.37
ATRAID-203ENST00000419744 TNRQ92752 1358 aa12.76□□□□□ -0.37
ATRAID-203ENST00000419744 NPHP4O75161 1426 aaPredicted RBP12.75□□□□□ -0.37
ATRAID-203ENST00000419744 PRR29P0C7W0 189 aa12.75□□□□□ -0.37
ATRAID-203ENST00000419744 UBTFP17480 764 aaKnown RBP12.75□□□□□ -0.37
ATRAID-203ENST00000419744 MIER1Q8N108 512 aa12.75□□□□□ -0.37
ATRAID-203ENST00000419744 PLCD3Q8N3E9 789 aa12.75□□□□□ -0.37
ATRAID-203ENST00000419744 LRRC7Q96NW7 1537 aa12.75□□□□□ -0.37
ATRAID-203ENST00000419744 MBD5Q9P267 1494 aa12.75□□□□□ -0.37
ATRAID-203ENST00000419744 ZC3H13Q5T200 1668 aaKnown RBP12.74□□□□□ -0.37
ATRAID-203ENST00000419744 NLRP1Q9C000 1473 aa12.74□□□□□ -0.37
ATRAID-203ENST00000419744 RGS17Q9UGC6 210 aaPredicted RBP12.74□□□□□ -0.37
ATRAID-203ENST00000419744 ZNF777Q9ULD5 760 aaPredicted RBP12.74□□□□□ -0.37
ATRAID-203ENST00000419744 TIAM1Q13009 1591 aa12.73□□□□□ -0.37
ATRAID-203ENST00000419744 UGGT1Q9NYU2 1555 aa12.73□□□□□ -0.37
ATRAID-203ENST00000419744 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.73□□□□□ -0.37
ATRAID-203ENST00000419744 RTEL1-TNFRSF6BF6WH68 1400 aa12.72□□□□□ -0.37
ATRAID-203ENST00000419744 IFNLR1Q8IU57 520 aaPredicted RBP12.72□□□□□ -0.37
ATRAID-203ENST00000419744 DHX29Q7Z478 1369 aaKnown RBP12.71□□□□□ -0.37
ATRAID-203ENST00000419744 FBXO31Q5XUX0 539 aaPredicted RBP12.71□□□□□ -0.37
ATRAID-203ENST00000419744 XIRP1Q702N8 1843 aaKnown RBP12.7□□□□□ -0.38
ATRAID-203ENST00000419744 PLEKHG5O94827 1062 aa12.7□□□□□ -0.38
ATRAID-203ENST00000419744 MIA2Q96PC5 1412 aa12.7□□□□□ -0.38
ATRAID-203ENST00000419744 CFDP1Q9UEE9 299 aaPredicted RBP12.69□□□□□ -0.38
ATRAID-203ENST00000419744 CCNB3Q8WWL7 1395 aa12.69□□□□□ -0.38
ATRAID-203ENST00000419744 AMER1Q5JTC6 1135 aaPredicted RBP12.68□□□□□ -0.38
ATRAID-203ENST00000419744 ANKLE2Q86XL3 938 aa12.68□□□□□ -0.38
ATRAID-203ENST00000419744 KLHL34Q8N239 644 aa12.66□□□□□ -0.38
ATRAID-203ENST00000419744 SETD1AO15047 1707 aaKnown RBP12.65□□□□□ -0.38
ATRAID-203ENST00000419744 UBR1Q8IWV7 1749 aa12.65□□□□□ -0.38
ATRAID-203ENST00000419744 ZNF644Q9H582 1327 aaPredicted RBP12.65□□□□□ -0.38
ATRAID-203ENST00000419744 THEMISQ8N1K5 641 aaPredicted RBP12.65□□□□□ -0.38
ATRAID-203ENST00000419744 EHBP1L1Q8N3D4 1523 aa12.65□□□□□ -0.38
ATRAID-203ENST00000419744 CCDC141Q6ZP82 1450 aa12.65□□□□□ -0.38
ATRAID-203ENST00000419744 ABCC3O15438 1527 aa12.63□□□□□ -0.39
ATRAID-203ENST00000419744 ERVK-7P63135 1459 aa12.63□□□□□ -0.39
ATRAID-203ENST00000419744 MROH1Q8NDA8 1641 aa12.62□□□□□ -0.39
ATRAID-203ENST00000419744 ARHGAP23Q9P227 1491 aa12.62□□□□□ -0.39
ATRAID-203ENST00000419744 KIF3BO15066 747 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms