RNA–Protein interactions for RNA: ENST00000419210.1

COPS6-203, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 3

Gene COPS6, Length 218 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-203ENST00000419210 TNRQ92752 1358 aa29.56■■■□□ 2.32
COPS6-203ENST00000419210 CFDP1Q9UEE9 299 aaPredicted RBP29.56■■■□□ 2.32
COPS6-203ENST00000419210 SENP3Q9H4L4 574 aaPredicted RBP29.53■■■□□ 2.32
COPS6-203ENST00000419210 ANKLE2Q86XL3 938 aa29.51■■■□□ 2.31
COPS6-203ENST00000419210 CCNB3Q8WWL7 1395 aa29.51■■■□□ 2.31
COPS6-203ENST00000419210 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.5■■■□□ 2.31
COPS6-203ENST00000419210 DEPDC5O75140 1603 aa29.49■■■□□ 2.31
COPS6-203ENST00000419210 RNF17Q9BXT8 1623 aaKnown RBP29.49■■■□□ 2.31
COPS6-203ENST00000419210 KDM5DQ9BY66 1539 aa29.49■■■□□ 2.31
COPS6-203ENST00000419210 PZPP20742 1482 aa29.48■■■□□ 2.31
COPS6-203ENST00000419210 NPHP4O75161 1426 aaPredicted RBP29.48■■■□□ 2.31
COPS6-203ENST00000419210 IQGAP1P46940 1657 aa29.48■■■□□ 2.31
COPS6-203ENST00000419210 FBXO31Q5XUX0 539 aaPredicted RBP29.46■■■□□ 2.31
COPS6-203ENST00000419210 SYNMO15061 1565 aa29.46■■■□□ 2.31
COPS6-203ENST00000419210 UGGT1Q9NYU2 1555 aa29.46■■■□□ 2.31
COPS6-203ENST00000419210 FAM135AQ9P2D6 1515 aa29.45■■■□□ 2.31
COPS6-203ENST00000419210 MED14O60244 1454 aa29.44■■■□□ 2.3
COPS6-203ENST00000419210 THEMISQ8N1K5 641 aaPredicted RBP29.43■■■□□ 2.3
COPS6-203ENST00000419210 NLRP1Q9C000 1473 aa29.42■■■□□ 2.3
COPS6-203ENST00000419210 STRCP1A6NGW2 1772 aa29.41■■■□□ 2.3
COPS6-203ENST00000419210 DHX29Q7Z478 1369 aaKnown RBP29.4■■■□□ 2.3
COPS6-203ENST00000419210 RTEL1-TNFRSF6BF6WH68 1400 aa29.39■■■□□ 2.3
COPS6-203ENST00000419210 LRRC7Q96NW7 1537 aa29.39■■■□□ 2.3
COPS6-203ENST00000419210 KIF3BO15066 747 aa29.37■■■□□ 2.29
COPS6-203ENST00000419210 TIAM1Q13009 1591 aa29.36■■■□□ 2.29
COPS6-203ENST00000419210 WASHC2CQ9Y4E1 1318 aa29.36■■■□□ 2.29
COPS6-203ENST00000419210 MTUS2Q5JR59 1369 aa29.36■■■□□ 2.29
COPS6-203ENST00000419210 MIA2Q96PC5 1412 aa29.36■■■□□ 2.29
COPS6-203ENST00000419210 MBD5Q9P267 1494 aa29.35■■■□□ 2.29
COPS6-203ENST00000419210 ZNF644Q9H582 1327 aaPredicted RBP29.34■■■□□ 2.29
COPS6-203ENST00000419210 RGS17Q9UGC6 210 aaPredicted RBP29.3■■■□□ 2.28
COPS6-203ENST00000419210 ZC3H13Q5T200 1668 aaKnown RBP29.26■■■□□ 2.27
COPS6-203ENST00000419210 CCDC141Q6ZP82 1450 aa29.26■■■□□ 2.27
COPS6-203ENST00000419210 EHBP1L1Q8N3D4 1523 aa29.24■■■□□ 2.27
COPS6-203ENST00000419210 XIRP1Q702N8 1843 aaKnown RBP29.18■■■□□ 2.26
COPS6-203ENST00000419210 UBR1Q8IWV7 1749 aa29.17■■■□□ 2.26
COPS6-203ENST00000419210 CAMSAP2Q08AD1 1489 aa29.16■■■□□ 2.26
COPS6-203ENST00000419210 SCAF11Q99590 1463 aaKnown RBP29.14■■■□□ 2.26
COPS6-203ENST00000419210 ABCC3O15438 1527 aa29.14■■■□□ 2.25
COPS6-203ENST00000419210 ERVK-7P63135 1459 aa29.13■■■□□ 2.25
COPS6-203ENST00000419210 CHIC1Q5VXU3 224 aa29.13■■■□□ 2.25
COPS6-203ENST00000419210 POTEAQ6S8J7 498 aa29.13■■■□□ 2.25
COPS6-203ENST00000419210 CEP162Q5TB80 1403 aa29.12■■■□□ 2.25
COPS6-203ENST00000419210 SETD1AO15047 1707 aaKnown RBP29.12■■■□□ 2.25
COPS6-203ENST00000419210 RSPH4AQ5TD94 716 aa29.09■■■□□ 2.25
COPS6-203ENST00000419210 FAM135BQ49AJ0 1406 aa29.07■■■□□ 2.24
COPS6-203ENST00000419210 CEP152O94986 1710 aa29.06■■■□□ 2.24
COPS6-203ENST00000419210 ARHGEF5Q12774 1597 aa29.06■■■□□ 2.24
COPS6-203ENST00000419210 ROBO1Q9Y6N7 1651 aa29.05■■■□□ 2.24
COPS6-203ENST00000419210 EIF2AK4Q9P2K8 1649 aaKnown RBP29.05■■■□□ 2.24
COPS6-203ENST00000419210 CFAP65Q6ZU64 1925 aaKnown RBP29.04■■■□□ 2.24
COPS6-203ENST00000419210 SLIT1O75093 1534 aa29.03■■■□□ 2.24
COPS6-203ENST00000419210 TSPY4P0CV99 314 aa29.02■■■□□ 2.24
COPS6-203ENST00000419210 TSPY10P0CW01 314 aa29.02■■■□□ 2.24
COPS6-203ENST00000419210 NCOA2Q15596 1464 aa29.02■■■□□ 2.24
COPS6-203ENST00000419210 TXNDC2Q86VQ3 553 aa29.01■■■□□ 2.23
COPS6-203ENST00000419210 ARHGAP23Q9P227 1491 aa29.01■■■□□ 2.23
COPS6-203ENST00000419210 MROH1Q8NDA8 1641 aa28.98■■■□□ 2.23
COPS6-203ENST00000419210 LTKP29376 864 aa28.98■■■□□ 2.23
COPS6-203ENST00000419210 EID1Q9Y6B2 187 aa28.97■■■□□ 2.23
COPS6-203ENST00000419210 MAST1Q9Y2H9 1570 aa28.94■■■□□ 2.22
COPS6-203ENST00000419210 LRRC9Q6ZRR7 1453 aa28.94■■■□□ 2.22
COPS6-203ENST00000419210 TMEM94Q12767 1356 aa28.94■■■□□ 2.22
COPS6-203ENST00000419210 PHLPP1O60346 1717 aa28.91■■■□□ 2.22
COPS6-203ENST00000419210 PIK3C2BO00750 1634 aa28.91■■■□□ 2.22
COPS6-203ENST00000419210 MAP3K1Q13233 1512 aa28.9■■■□□ 2.22
COPS6-203ENST00000419210 TMEM2Q9UHN6 1383 aa28.85■■■□□ 2.21
COPS6-203ENST00000419210 PROSER2Q86WR7 435 aaPredicted RBP28.83■■■□□ 2.21
COPS6-203ENST00000419210 STAG3Q9UJ98 1225 aa28.83■■■□□ 2.21
COPS6-203ENST00000419210 JCADQ9P266 1359 aa28.83■■■□□ 2.21
COPS6-203ENST00000419210 PRDM15P57071 1507 aaPredicted RBP28.82■■■□□ 2.2
COPS6-203ENST00000419210 KDM5AP29375 1690 aaKnown RBP28.81■■■□□ 2.2
COPS6-203ENST00000419210 DUOX2Q9NRD8 1548 aa28.81■■■□□ 2.2
COPS6-203ENST00000419210 ARHGAP31Q2M1Z3 1444 aa28.81■■■□□ 2.2
COPS6-203ENST00000419210 KCNA6P17658 529 aa28.81■■■□□ 2.2
COPS6-203ENST00000419210 RBM33Q96EV2 1170 aaKnown RBP28.81■■■□□ 2.2
COPS6-203ENST00000419210 EFCAB6Q5THR3 1501 aa28.8■■■□□ 2.2
COPS6-203ENST00000419210 NKTRP30414 1462 aaKnown RBP28.8■■■□□ 2.2
COPS6-203ENST00000419210 MSH6P52701 1360 aa28.79■■■□□ 2.2
COPS6-203ENST00000419210 NWD1Q149M9 1564 aa28.79■■■□□ 2.2
COPS6-203ENST00000419210 UPF1Q92900 1129 aaKnown RBP eCLIP28.75■■■□□ 2.19
COPS6-203ENST00000419210 SLC26A8Q96RN1 970 aa28.75■■■□□ 2.19
COPS6-203ENST00000419210 TET3O43151 1660 aa28.74■■■□□ 2.19
COPS6-203ENST00000419210 COL16A1Q07092 1604 aaPredicted RBP28.74■■■□□ 2.19
COPS6-203ENST00000419210 MEX3CQ5U5Q3 659 aaKnown RBP28.73■■■□□ 2.19
COPS6-203ENST00000419210 TRIM52Q96A61 297 aa28.72■■■□□ 2.19
COPS6-203ENST00000419210 SLAIN2Q9P270 581 aa28.71■■■□□ 2.19
COPS6-203ENST00000419210 LRP6O75581 1613 aa28.7■■■□□ 2.19
COPS6-203ENST00000419210 ZNF772Q68DY9 489 aaPredicted RBP28.69■■■□□ 2.18
COPS6-203ENST00000419210 ERBINQ96RT1 1412 aa28.69■■■□□ 2.18
COPS6-203ENST00000419210 SPATA31A6Q5VVP1 1343 aa28.67■■■□□ 2.18
COPS6-203ENST00000419210 KIF15Q9NS87 1388 aa28.66■■■□□ 2.18
COPS6-203ENST00000419210 ADGRB3O60242 1522 aa28.66■■■□□ 2.18
COPS6-203ENST00000419210 BCANQ96GW7 911 aa28.66■■■□□ 2.18
COPS6-203ENST00000419210 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.66■■■□□ 2.18
COPS6-203ENST00000419210 KANK1Q14678 1352 aa28.65■■■□□ 2.18
COPS6-203ENST00000419210 FGD6Q6ZV73 1430 aa28.65■■■□□ 2.18
COPS6-203ENST00000419210 CROCC2H7BZ55 1655 aa28.64■■■□□ 2.18
COPS6-203ENST00000419210 MYOM3Q5VTT5 1437 aa28.63■■■□□ 2.17
COPS6-203ENST00000419210 SHPRHQ149N8 1683 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms