RNA–Protein interactions for RNA: ENST00000417030.2

CKLF-205, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 4 BASIC

Gene CKLF, Length 628 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-205ENST00000417030 UHRF1BP1Q6BDS2 1440 aa33.48■■■□□ 2.95
CKLF-205ENST00000417030 NPATQ14207 1427 aa33.46■■■□□ 2.95
CKLF-205ENST00000417030 WASHC2CQ9Y4E1 1318 aa33.45■■■□□ 2.95
CKLF-205ENST00000417030 RRP7BPQ9NSQ0 103 aa33.43■■■□□ 2.94
CKLF-205ENST00000417030 DUOX2Q9NRD8 1548 aa33.43■■■□□ 2.94
CKLF-205ENST00000417030 KIF15Q9NS87 1388 aa33.41■■■□□ 2.94
CKLF-205ENST00000417030 ADGRL2O95490 1459 aa33.41■■■□□ 2.94
CKLF-205ENST00000417030 FAM135AQ9P2D6 1515 aa33.41■■■□□ 2.94
CKLF-205ENST00000417030 ANKRD30AQ9BXX3 1397 aa33.4■■■□□ 2.94
CKLF-205ENST00000417030 CHIC2Q9UKJ5 165 aa33.4■■■□□ 2.94
CKLF-205ENST00000417030 PTPRKQ15262 1439 aa33.37■■■□□ 2.93
CKLF-205ENST00000417030 NCOA1Q15788 1441 aa33.37■■■□□ 2.93
CKLF-205ENST00000417030 EIF2AK4Q9P2K8 1649 aaKnown RBP33.37■■■□□ 2.93
CKLF-205ENST00000417030 KDM5DQ9BY66 1539 aa33.37■■■□□ 2.93
CKLF-205ENST00000417030 RNF17Q9BXT8 1623 aaKnown RBP33.32■■■□□ 2.92
CKLF-205ENST00000417030 ERBINQ96RT1 1412 aa33.32■■■□□ 2.92
CKLF-205ENST00000417030 ITGAEP38570 1179 aa33.28■■■□□ 2.92
CKLF-205ENST00000417030 ROCK1Q13464 1354 aa33.28■■■□□ 2.92
CKLF-205ENST00000417030 DMRT2Q9Y5R5 561 aa33.26■■■□□ 2.91
CKLF-205ENST00000417030 PZPP20742 1482 aa33.25■■■□□ 2.91
CKLF-205ENST00000417030 FBXO31Q5XUX0 539 aaPredicted RBP33.25■■■□□ 2.91
CKLF-205ENST00000417030 ABCC3O15438 1527 aa33.21■■■□□ 2.91
CKLF-205ENST00000417030 ZC3H13Q5T200 1668 aaKnown RBP33.2■■■□□ 2.91
CKLF-205ENST00000417030 MROH1Q8NDA8 1641 aa33.2■■■□□ 2.9
CKLF-205ENST00000417030 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.19■■■□□ 2.9
CKLF-205ENST00000417030 TNRQ92752 1358 aa33.19■■■□□ 2.9
CKLF-205ENST00000417030 KANK1Q14678 1352 aa33.17■■■□□ 2.9
CKLF-205ENST00000417030 ANKRD50Q9ULJ7 1429 aa33.17■■■□□ 2.9
CKLF-205ENST00000417030 MYO3AQ8NEV4 1616 aa33.17■■■□□ 2.9
CKLF-205ENST00000417030 DEPDC5O75140 1603 aa33.16■■■□□ 2.9
CKLF-205ENST00000417030 STRCQ7RTU9 1775 aa33.14■■■□□ 2.9
CKLF-205ENST00000417030 PRDM15P57071 1507 aaPredicted RBP33.14■■■□□ 2.9
CKLF-205ENST00000417030 CEP170BQ9Y4F5 1589 aaPredicted RBP33.13■■■□□ 2.89
CKLF-205ENST00000417030 ZNF142P52746 1687 aaPredicted RBP33.12■■■□□ 2.89
CKLF-205ENST00000417030 A2ML1A8K2U0 1454 aa33.12■■■□□ 2.89
CKLF-205ENST00000417030 CAMSAP1Q5T5Y3 1602 aa33.1■■■□□ 2.89
CKLF-205ENST00000417030 CEP152O94986 1710 aa33.08■■■□□ 2.89
CKLF-205ENST00000417030 PTPRTO14522 1441 aa33.07■■■□□ 2.88
CKLF-205ENST00000417030 ARHGAP31Q2M1Z3 1444 aa33.07■■■□□ 2.88
CKLF-205ENST00000417030 NLRP1Q9C000 1473 aa33.06■■■□□ 2.88
CKLF-205ENST00000417030 PKD2Q13563 968 aa33.05■■■□□ 2.88
CKLF-205ENST00000417030 GCC2Q8IWJ2 1684 aa33.04■■■□□ 2.88
CKLF-205ENST00000417030 PLA2R1Q13018 1463 aa33.04■■■□□ 2.88
CKLF-205ENST00000417030 THEMISQ8N1K5 641 aaPredicted RBP33.03■■■□□ 2.88
CKLF-205ENST00000417030 SPATA31D1Q6ZQQ2 1576 aa33.03■■■□□ 2.88
CKLF-205ENST00000417030 ERVK-7P63135 1459 aa33.02■■■□□ 2.88
CKLF-205ENST00000417030 NCKAP5LQ9HCH0 1330 aa33.02■■■□□ 2.88
CKLF-205ENST00000417030 VWDEQ8N2E2 1590 aa33.01■■■□□ 2.88
CKLF-205ENST00000417030 NAIPQ13075 1403 aa33.01■■■□□ 2.87
CKLF-205ENST00000417030 LMTK2Q8IWU2 1503 aa33■■■□□ 2.87
CKLF-205ENST00000417030 UNC13BO14795 1591 aa33■■■□□ 2.87
CKLF-205ENST00000417030 HFM1A2PYH4 1435 aa32.99■■■□□ 2.87
CKLF-205ENST00000417030 ILDR1Q86SU0 546 aaPredicted RBP32.95■■■□□ 2.87
CKLF-205ENST00000417030 CFAP65Q6ZU64 1925 aaKnown RBP32.94■■■□□ 2.86
CKLF-205ENST00000417030 UGGT1Q9NYU2 1555 aa32.94■■■□□ 2.86
CKLF-205ENST00000417030 ANKLE2Q86XL3 938 aa32.91■■■□□ 2.86
CKLF-205ENST00000417030 CERKQ8TCT0 537 aa32.9■■■□□ 2.86
CKLF-205ENST00000417030 FBXO41Q8TF61 875 aa32.86■■■□□ 2.85
CKLF-205ENST00000417030 IQGAP3Q86VI3 1631 aa32.86■■■□□ 2.85
CKLF-205ENST00000417030 EFCAB6Q5THR3 1501 aa32.86■■■□□ 2.85
CKLF-205ENST00000417030 TET3O43151 1660 aa32.84■■■□□ 2.85
CKLF-205ENST00000417030 RPRD2Q5VT52 1461 aaKnown RBP32.82■■■□□ 2.84
CKLF-205ENST00000417030 NUP155O75694 1391 aa32.82■■■□□ 2.84
CKLF-205ENST00000417030 NOS1P29475 1434 aa32.8■■■□□ 2.84
CKLF-205ENST00000417030 IDI1Q13907 227 aa32.79■■■□□ 2.84
CKLF-205ENST00000417030 SLC52A1Q9NWF4 448 aa32.79■■■□□ 2.84
CKLF-205ENST00000417030 STAG3Q9UJ98 1225 aa32.79■■■□□ 2.84
CKLF-205ENST00000417030 POLR1AO95602 1720 aaPredicted RBP32.76■■■□□ 2.83
CKLF-205ENST00000417030 UBR1Q8IWV7 1749 aa32.76■■■□□ 2.83
CKLF-205ENST00000417030 SETD5Q9C0A6 1442 aa32.73■■■□□ 2.83
CKLF-205ENST00000417030 MED14O60244 1454 aa32.73■■■□□ 2.83
CKLF-205ENST00000417030 NEURL4Q96JN8 1562 aa32.72■■■□□ 2.83
CKLF-205ENST00000417030 SYNMO15061 1565 aa32.71■■■□□ 2.83
CKLF-205ENST00000417030 E9PCH4 1651 aa32.71■■■□□ 2.83
CKLF-205ENST00000417030 ZNF335Q9H4Z2 1342 aaPredicted RBP32.71■■■□□ 2.83
CKLF-205ENST00000417030 PIK3C2BO00750 1634 aa32.7■■■□□ 2.83
CKLF-205ENST00000417030 LTBP4Q8N2S1 1624 aa32.7■■■□□ 2.83
CKLF-205ENST00000417030 NPHP4O75161 1426 aaPredicted RBP32.7■■■□□ 2.83
CKLF-205ENST00000417030 EID1Q9Y6B2 187 aa32.7■■■□□ 2.83
CKLF-205ENST00000417030 TXNDC2Q86VQ3 553 aa32.69■■■□□ 2.82
CKLF-205ENST00000417030 TRIM52Q96A61 297 aa32.67■■■□□ 2.82
CKLF-205ENST00000417030 ARHGAP23Q9P227 1491 aa32.67■■■□□ 2.82
CKLF-205ENST00000417030 SLIT1O75093 1534 aa32.67■■■□□ 2.82
CKLF-205ENST00000417030 KDM5AP29375 1690 aaKnown RBP32.66■■■□□ 2.82
CKLF-205ENST00000417030 TMEM2Q9UHN6 1383 aa32.65■■■□□ 2.82
CKLF-205ENST00000417030 LTKP29376 864 aa32.64■■■□□ 2.82
CKLF-205ENST00000417030 SCAF11Q99590 1463 aaKnown RBP32.63■■■□□ 2.81
CKLF-205ENST00000417030 ACIN1Q9UKV3 1341 aaKnown RBP32.63■■■□□ 2.81
CKLF-205ENST00000417030 RAB3GAP2Q9H2M9 1393 aa32.61■■■□□ 2.81
CKLF-205ENST00000417030 IQSEC2Q5JU85 1478 aa32.59■■■□□ 2.81
CKLF-205ENST00000417030 IQGAP1P46940 1657 aa32.59■■■□□ 2.81
CKLF-205ENST00000417030 ADGRB3O60242 1522 aa32.57■■■□□ 2.8
CKLF-205ENST00000417030 HDGFP51858 240 aaKnown RBP32.55■■■□□ 2.8
CKLF-205ENST00000417030 SLC4A1APQ9BWU0 796 aaKnown RBP32.54■■■□□ 2.8
CKLF-205ENST00000417030 SPHKAPQ2M3C7 1700 aa32.54■■■□□ 2.8
CKLF-205ENST00000417030 CHGAP10645 457 aaKnown RBP32.52■■■□□ 2.8
CKLF-205ENST00000417030 HRCP23327 699 aa32.51■■■□□ 2.79
CKLF-205ENST00000417030 CPS1P31327 1500 aa32.5■■■□□ 2.79
CKLF-205ENST00000417030 TRIM26Q12899 539 aaPredicted RBP32.49■■■□□ 2.79
CKLF-205ENST00000417030 TMEM131LA2VDJ0 1609 aa32.47■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms