RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 MED14O60244 1454 aa26.25■■□□□ 1.79
CPNE1-208ENST00000414711 KIAA1107Q9UPP5 1409 aa26.25■■□□□ 1.79
CPNE1-208ENST00000414711 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.25■■□□□ 1.797e-10■■□□□ 13.2
CPNE1-208ENST00000414711 DEPDC5O75140 1603 aa26.25■■□□□ 1.79
CPNE1-208ENST00000414711 LRRC7Q96NW7 1537 aa26.24■■□□□ 1.79
CPNE1-208ENST00000414711 UBTFP17480 764 aaKnown RBP26.24■■□□□ 1.79
CPNE1-208ENST00000414711 PLEKHH2Q8IVE3 1493 aa26.23■■□□□ 1.79
CPNE1-208ENST00000414711 GPATCH8Q9UKJ3 1502 aaKnown RBP26.23■■□□□ 1.79
CPNE1-208ENST00000414711 IQGAP1P46940 1657 aa26.22■■□□□ 1.79
CPNE1-208ENST00000414711 EHMT2Q96KQ7 1210 aa26.21■■□□□ 1.79
CPNE1-208ENST00000414711 PZPP20742 1482 aa26.21■■□□□ 1.79
CPNE1-208ENST00000414711 STRCP1A6NGW2 1772 aa26.2■■□□□ 1.79
CPNE1-208ENST00000414711 FBXO31Q5XUX0 539 aaPredicted RBP26.2■■□□□ 1.78
CPNE1-208ENST00000414711 CASKIN1Q8WXD9 1431 aa26.2■■□□□ 1.78
CPNE1-208ENST00000414711 UGGT1Q9NYU2 1555 aa26.18■■□□□ 1.78
CPNE1-208ENST00000414711 THEMISQ8N1K5 641 aaPredicted RBP26.17■■□□□ 1.78
CPNE1-208ENST00000414711 FAM135AQ9P2D6 1515 aa26.17■■□□□ 1.78
CPNE1-208ENST00000414711 NLRP1Q9C000 1473 aa26.17■■□□□ 1.78
CPNE1-208ENST00000414711 KDM5DQ9BY66 1539 aa26.16■■□□□ 1.78
CPNE1-208ENST00000414711 POTEAQ6S8J7 498 aa26.16■■□□□ 1.78
CPNE1-208ENST00000414711 CFDP1Q9UEE9 299 aaPredicted RBP26.12■■□□□ 1.77
CPNE1-208ENST00000414711 MIA2Q96PC5 1412 aa26.11■■□□□ 1.77
CPNE1-208ENST00000414711 SETD1AO15047 1707 aaKnown RBP26.11■■□□□ 1.77
CPNE1-208ENST00000414711 DHX29Q7Z478 1369 aaKnown RBP26.07■■□□□ 1.76
CPNE1-208ENST00000414711 FYCO1Q9BQS8 1478 aa26.06■■□□□ 1.76
CPNE1-208ENST00000414711 CCNB3Q8WWL7 1395 aa26.05■■□□□ 1.76
CPNE1-208ENST00000414711 KIF3BO15066 747 aa26.03■■□□□ 1.76
CPNE1-208ENST00000414711 RTEL1-TNFRSF6BF6WH68 1400 aa26.03■■□□□ 1.76
CPNE1-208ENST00000414711 ZC3H13Q5T200 1668 aaKnown RBP26.03■■□□□ 1.76
CPNE1-208ENST00000414711 WASHC2CQ9Y4E1 1318 aa26.02■■□□□ 1.76
CPNE1-208ENST00000414711 MBD5Q9P267 1494 aa26■■□□□ 1.75
CPNE1-208ENST00000414711 FAM135BQ49AJ0 1406 aa25.99■■□□□ 1.75
CPNE1-208ENST00000414711 XIRP1Q702N8 1843 aaKnown RBP25.97■■□□□ 1.75
CPNE1-208ENST00000414711 ZNF644Q9H582 1327 aaPredicted RBP25.96■■□□□ 1.75
CPNE1-208ENST00000414711 SCAF11Q99590 1463 aaKnown RBP25.93■■□□□ 1.74
CPNE1-208ENST00000414711 TIAM1Q13009 1591 aa25.91■■□□□ 1.74
CPNE1-208ENST00000414711 ROBO1Q9Y6N7 1651 aa25.9■■□□□ 1.74
CPNE1-208ENST00000414711 ERVK-7P63135 1459 aa25.87■■□□□ 1.73
CPNE1-208ENST00000414711 CCDC141Q6ZP82 1450 aa25.86■■□□□ 1.73
CPNE1-208ENST00000414711 UBR1Q8IWV7 1749 aa25.86■■□□□ 1.73
CPNE1-208ENST00000414711 MTUS2Q5JR59 1369 aa25.86■■□□□ 1.73
CPNE1-208ENST00000414711 ABCC3O15438 1527 aa25.84■■□□□ 1.73
CPNE1-208ENST00000414711 UPF1Q92900 1129 aaKnown RBP eCLIP25.84■■□□□ 1.73
CPNE1-208ENST00000414711 NCOA2Q15596 1464 aa25.81■■□□□ 1.72
CPNE1-208ENST00000414711 ARHGAP23Q9P227 1491 aa25.81■■□□□ 1.72
CPNE1-208ENST00000414711 SLIT1O75093 1534 aa25.81■■□□□ 1.72
CPNE1-208ENST00000414711 TMEM94Q12767 1356 aa25.81■■□□□ 1.72
CPNE1-208ENST00000414711 LRRC9Q6ZRR7 1453 aa25.8■■□□□ 1.72
CPNE1-208ENST00000414711 LTKP29376 864 aa25.79■■□□□ 1.72
CPNE1-208ENST00000414711 MAP3K1Q13233 1512 aa25.78■■□□□ 1.72
CPNE1-208ENST00000414711 CHIC1Q5VXU3 224 aa25.78■■□□□ 1.72
CPNE1-208ENST00000414711 TXNDC2Q86VQ3 553 aa25.77■■□□□ 1.72
CPNE1-208ENST00000414711 JCADQ9P266 1359 aa25.76■■□□□ 1.71
CPNE1-208ENST00000414711 EHBP1L1Q8N3D4 1523 aa25.75■■□□□ 1.71
CPNE1-208ENST00000414711 PHLPP1O60346 1717 aa25.74■■□□□ 1.71
CPNE1-208ENST00000414711 CAMSAP2Q08AD1 1489 aa25.74■■□□□ 1.71
CPNE1-208ENST00000414711 TRIM52Q96A61 297 aa25.72■■□□□ 1.71
CPNE1-208ENST00000414711 CEP162Q5TB80 1403 aa25.71■■□□□ 1.71
CPNE1-208ENST00000414711 EID1Q9Y6B2 187 aa25.7■■□□□ 1.7
CPNE1-208ENST00000414711 RSPH4AQ5TD94 716 aa25.69■■□□□ 1.7
CPNE1-208ENST00000414711 LRP6O75581 1613 aa25.68■■□□□ 1.7
CPNE1-208ENST00000414711 MROH1Q8NDA8 1641 aa25.68■■□□□ 1.7
CPNE1-208ENST00000414711 CEP152O94986 1710 aa25.67■■□□□ 1.7
CPNE1-208ENST00000414711 EIF2AK4Q9P2K8 1649 aaKnown RBP25.66■■□□□ 1.7
CPNE1-208ENST00000414711 ARHGEF5Q12774 1597 aa25.66■■□□□ 1.7
CPNE1-208ENST00000414711 ZNF772Q68DY9 489 aaPredicted RBP25.66■■□□□ 1.7
CPNE1-208ENST00000414711 RBM33Q96EV2 1170 aaKnown RBP25.66■■□□□ 1.7
CPNE1-208ENST00000414711 PRDM15P57071 1507 aaPredicted RBP25.66■■□□□ 1.7
CPNE1-208ENST00000414711 SRCAPQ6ZRS2 3230 aa25.66■■□□□ 1.7
CPNE1-208ENST00000414711 KCNA6P17658 529 aa25.65■■□□□ 1.7
CPNE1-208ENST00000414711 PROSER2Q86WR7 435 aaPredicted RBP25.65■■□□□ 1.7
CPNE1-208ENST00000414711 COL16A1Q07092 1604 aaPredicted RBP25.65■■□□□ 1.7
CPNE1-208ENST00000414711 TMEM2Q9UHN6 1383 aa25.64■■□□□ 1.69
CPNE1-208ENST00000414711 NKTRP30414 1462 aaKnown RBP25.64■■□□□ 1.69
CPNE1-208ENST00000414711 CFAP65Q6ZU64 1925 aaKnown RBP25.63■■□□□ 1.69
CPNE1-208ENST00000414711 MEX3CQ5U5Q3 659 aaKnown RBP25.63■■□□□ 1.69
CPNE1-208ENST00000414711 MSH6P52701 1360 aa25.63■■□□□ 1.69
CPNE1-208ENST00000414711 SPATA31A6Q5VVP1 1343 aa25.62■■□□□ 1.69
CPNE1-208ENST00000414711 NWD1Q149M9 1564 aa25.61■■□□□ 1.69
CPNE1-208ENST00000414711 PIK3C2BO00750 1634 aa25.61■■□□□ 1.69
CPNE1-208ENST00000414711 TSPY4P0CV99 314 aa25.6■■□□□ 1.69
CPNE1-208ENST00000414711 TSPY10P0CW01 314 aa25.6■■□□□ 1.69
CPNE1-208ENST00000414711 SLAIN2Q9P270 581 aa25.59■■□□□ 1.69
CPNE1-208ENST00000414711 FGD6Q6ZV73 1430 aa25.59■■□□□ 1.69
CPNE1-208ENST00000414711 CDK12Q9NYV4 1490 aaPredicted RBP25.59■■□□□ 1.69
CPNE1-208ENST00000414711 TET3O43151 1660 aa25.56■■□□□ 1.68
CPNE1-208ENST00000414711 RXRBP28702 533 aa25.56■■□□□ 1.68
CPNE1-208ENST00000414711 MAST1Q9Y2H9 1570 aa25.56■■□□□ 1.68
CPNE1-208ENST00000414711 ARHGAP31Q2M1Z3 1444 aa25.55■■□□□ 1.68
CPNE1-208ENST00000414711 SLC26A8Q96RN1 970 aa25.55■■□□□ 1.68
CPNE1-208ENST00000414711 EFCAB6Q5THR3 1501 aa25.54■■□□□ 1.68
CPNE1-208ENST00000414711 KDM5AP29375 1690 aaKnown RBP25.52■■□□□ 1.68
CPNE1-208ENST00000414711 STAG3Q9UJ98 1225 aa25.52■■□□□ 1.68
CPNE1-208ENST00000414711 SHPRHQ149N8 1683 aa25.52■■□□□ 1.68
CPNE1-208ENST00000414711 AHDC1Q5TGY3 1603 aaPredicted RBP25.47■■□□□ 1.67
CPNE1-208ENST00000414711 DUOX2Q9NRD8 1548 aa25.45■■□□□ 1.66
CPNE1-208ENST00000414711 RGS12O14924 1447 aa25.43■■□□□ 1.66
CPNE1-208ENST00000414711 ADGRB3O60242 1522 aa25.4■■□□□ 1.66
CPNE1-208ENST00000414711 AFF2P51816 1311 aa25.38■■□□□ 1.65
CPNE1-208ENST00000414711 IDI1Q13907 227 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms