RNA–Protein interactions for RNA: ENST00000413465.6

TP53-203, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 1,018 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-203ENST00000413465 DNMT1P26358 1616 aaKnown RBP17.09■□□□□ 0.33
TP53-203ENST00000413465 PREX1Q8TCU6 1659 aa17.09■□□□□ 0.33
TP53-203ENST00000413465 FAM135AQ9P2D6 1515 aa17.08■□□□□ 0.32
TP53-203ENST00000413465 DHX29Q7Z478 1369 aaKnown RBP17.08■□□□□ 0.32
TP53-203ENST00000413465 SETD1BQ9UPS6 1966 aaKnown RBP17.07■□□□□ 0.32
TP53-203ENST00000413465 CLTCQ00610 1675 aaKnown RBP17.06■□□□□ 0.32
TP53-203ENST00000413465 EIF2AK4Q9P2K8 1649 aaKnown RBP17.06■□□□□ 0.32
TP53-203ENST00000413465 LMTK3Q96Q04 1460 aa17.05■□□□□ 0.32
TP53-203ENST00000413465 RNF17Q9BXT8 1623 aaKnown RBP17.02■□□□□ 0.31
TP53-203ENST00000413465 DAPK1P53355 1430 aa17.02■□□□□ 0.31
TP53-203ENST00000413465 DUOX2Q9NRD8 1548 aa17.01■□□□□ 0.31
TP53-203ENST00000413465 ABCC5O15440 1437 aa17.01■□□□□ 0.31
TP53-203ENST00000413465 NPATQ14207 1427 aa17■□□□□ 0.31
TP53-203ENST00000413465 ZC3H13Q5T200 1668 aaKnown RBP17■□□□□ 0.31
TP53-203ENST00000413465 KDM5DQ9BY66 1539 aa17■□□□□ 0.31
TP53-203ENST00000413465 GGT6Q6P531 493 aa16.99■□□□□ 0.31
TP53-203ENST00000413465 UHRF1BP1Q6BDS2 1440 aa16.98■□□□□ 0.31
TP53-203ENST00000413465 KIF3BO15066 747 aa16.98■□□□□ 0.31
TP53-203ENST00000413465 CEBPAP49715 358 aaPredicted RBP16.97■□□□□ 0.31
TP53-203ENST00000413465 ERBINQ96RT1 1412 aa16.96■□□□□ 0.31
TP53-203ENST00000413465 ZMYM3Q14202 1370 aa16.96■□□□□ 0.31
TP53-203ENST00000413465 KIF15Q9NS87 1388 aa16.96■□□□□ 0.31
TP53-203ENST00000413465 ANKRD30AQ9BXX3 1397 aa16.95■□□□□ 0.3
TP53-203ENST00000413465 ADGRL2O95490 1459 aa16.94■□□□□ 0.3
TP53-203ENST00000413465 FAM50AQ14320 339 aaKnown RBP16.93■□□□□ 0.3
TP53-203ENST00000413465 ZNF142P52746 1687 aaPredicted RBP16.93■□□□□ 0.3
TP53-203ENST00000413465 MROH1Q8NDA8 1641 aa16.92■□□□□ 0.3
TP53-203ENST00000413465 MYO3AQ8NEV4 1616 aa16.92■□□□□ 0.3
TP53-203ENST00000413465 PRDM15P57071 1507 aaPredicted RBP16.92■□□□□ 0.3
TP53-203ENST00000413465 DEPDC5O75140 1603 aa16.92■□□□□ 0.3
TP53-203ENST00000413465 PZPP20742 1482 aa16.91■□□□□ 0.3
TP53-203ENST00000413465 PTPRKQ15262 1439 aa16.9■□□□□ 0.3
TP53-203ENST00000413465 NCOA1Q15788 1441 aa16.9■□□□□ 0.3
TP53-203ENST00000413465 WASHC2CQ9Y4E1 1318 aa16.9■□□□□ 0.3
TP53-203ENST00000413465 ABCC3O15438 1527 aa16.9■□□□□ 0.3
TP53-203ENST00000413465 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.89■□□□□ 0.3
TP53-203ENST00000413465 CEP152O94986 1710 aa16.89■□□□□ 0.29
TP53-203ENST00000413465 RRP7BPQ9NSQ0 103 aa16.88■□□□□ 0.29
TP53-203ENST00000413465 CAMSAP1Q5T5Y3 1602 aa16.88■□□□□ 0.29
TP53-203ENST00000413465 CEP170BQ9Y4F5 1589 aaPredicted RBP16.87■□□□□ 0.29
TP53-203ENST00000413465 HOXD11P31277 338 aaPredicted RBP16.87■□□□□ 0.29
TP53-203ENST00000413465 HSPA2P54652 639 aa16.87■□□□□ 0.29
TP53-203ENST00000413465 DMRT2Q9Y5R5 561 aa16.87■□□□□ 0.29
TP53-203ENST00000413465 CHIC2Q9UKJ5 165 aa16.85■□□□□ 0.29
TP53-203ENST00000413465 ROCK1Q13464 1354 aa16.84■□□□□ 0.29
TP53-203ENST00000413465 KANK1Q14678 1352 aa16.84■□□□□ 0.29
TP53-203ENST00000413465 STRCQ7RTU9 1775 aa16.84■□□□□ 0.29
TP53-203ENST00000413465 RRBP1Q9P2E9 1410 aaKnown RBP16.82■□□□□ 0.28
TP53-203ENST00000413465 TNRQ92752 1358 aa16.82■□□□□ 0.28
TP53-203ENST00000413465 SLC4A2P04920 1241 aa16.82■□□□□ 0.28
TP53-203ENST00000413465 PPARGC1BQ86YN6 1023 aaKnown RBP16.82■□□□□ 0.28
TP53-203ENST00000413465 SPATA31D1Q6ZQQ2 1576 aa16.81■□□□□ 0.28
TP53-203ENST00000413465 A2ML1A8K2U0 1454 aa16.81■□□□□ 0.28
TP53-203ENST00000413465 ANKRD50Q9ULJ7 1429 aa16.81■□□□□ 0.28
TP53-203ENST00000413465 VWDEQ8N2E2 1590 aa16.81■□□□□ 0.28
TP53-203ENST00000413465 NLRP1Q9C000 1473 aa16.8■□□□□ 0.28
TP53-203ENST00000413465 LMTK2Q8IWU2 1503 aa16.8■□□□□ 0.28
TP53-203ENST00000413465 PLA2R1Q13018 1463 aa16.8■□□□□ 0.28
TP53-203ENST00000413465 ARHGAP31Q2M1Z3 1444 aa16.79■□□□□ 0.28
TP53-203ENST00000413465 ERVK-7P63135 1459 aa16.79■□□□□ 0.28
TP53-203ENST00000413465 UNC13BO14795 1591 aa16.78■□□□□ 0.28
TP53-203ENST00000413465 CFAP65Q6ZU64 1925 aaKnown RBP16.77■□□□□ 0.28
TP53-203ENST00000413465 EFCAB6Q5THR3 1501 aa16.76■□□□□ 0.27
TP53-203ENST00000413465 RTN4Q9NQC3 1192 aaKnown RBP16.76■□□□□ 0.27
TP53-203ENST00000413465 POLR1AO95602 1720 aaPredicted RBP16.76■□□□□ 0.27
TP53-203ENST00000413465 AMER1Q5JTC6 1135 aaPredicted RBP16.75■□□□□ 0.27
TP53-203ENST00000413465 FBXO31Q5XUX0 539 aaPredicted RBP16.75■□□□□ 0.27
TP53-203ENST00000413465 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.75■□□□□ 0.27
TP53-203ENST00000413465 PTPRTO14522 1441 aa16.75■□□□□ 0.27
TP53-203ENST00000413465 TET3O43151 1660 aa16.75■□□□□ 0.27
TP53-203ENST00000413465 GCC2Q8IWJ2 1684 aa16.75■□□□□ 0.27
TP53-203ENST00000413465 UGGT1Q9NYU2 1555 aa16.73■□□□□ 0.27
TP53-203ENST00000413465 ITGAEP38570 1179 aa16.72■□□□□ 0.27
TP53-203ENST00000413465 RPRD2Q5VT52 1461 aaKnown RBP16.72■□□□□ 0.27
TP53-203ENST00000413465 IQGAP3Q86VI3 1631 aa16.71■□□□□ 0.27
TP53-203ENST00000413465 PKD2Q13563 968 aa16.71■□□□□ 0.27
TP53-203ENST00000413465 KDM5AP29375 1690 aaKnown RBP16.7■□□□□ 0.26
TP53-203ENST00000413465 SLC24A1O60721 1099 aa16.7■□□□□ 0.26
TP53-203ENST00000413465 UBR1Q8IWV7 1749 aa16.7■□□□□ 0.26
TP53-203ENST00000413465 MYCNP04198 464 aaPredicted RBP16.68■□□□□ 0.26
TP53-203ENST00000413465 THEMISQ8N1K5 641 aaPredicted RBP16.68■□□□□ 0.26
TP53-203ENST00000413465 PIK3C2BO00750 1634 aa16.66■□□□□ 0.26
TP53-203ENST00000413465 SYNMO15061 1565 aa16.65■□□□□ 0.26
TP53-203ENST00000413465 NEURL4Q96JN8 1562 aa16.65■□□□□ 0.26
TP53-203ENST00000413465 ATXN8OSP0DMR3 200 aa16.65■□□□□ 0.26
TP53-203ENST00000413465 NOS1P29475 1434 aa16.64■□□□□ 0.25
TP53-203ENST00000413465 E9PCH4 1651 aa16.64■□□□□ 0.25
TP53-203ENST00000413465 NCKAP5LQ9HCH0 1330 aa16.63■□□□□ 0.25
TP53-203ENST00000413465 HFM1A2PYH4 1435 aa16.62■□□□□ 0.25
TP53-203ENST00000413465 ANKLE2Q86XL3 938 aa16.62■□□□□ 0.25
TP53-203ENST00000413465 IQGAP1P46940 1657 aa16.62■□□□□ 0.25
TP53-203ENST00000413465 NUP155O75694 1391 aa16.62■□□□□ 0.25
TP53-203ENST00000413465 NAIPQ13075 1403 aa16.62■□□□□ 0.25
TP53-203ENST00000413465 ADGRB3O60242 1522 aa16.61■□□□□ 0.25
TP53-203ENST00000413465 MED14O60244 1454 aa16.61■□□□□ 0.25
TP53-203ENST00000413465 SLIT1O75093 1534 aa16.6■□□□□ 0.25
TP53-203ENST00000413465 FKBP8Q14318 412 aa16.6■□□□□ 0.25
TP53-203ENST00000413465 SLC52A1Q9NWF4 448 aa16.59■□□□□ 0.25
TP53-203ENST00000413465 ARHGAP23Q9P227 1491 aa16.59■□□□□ 0.25
TP53-203ENST00000413465 LTBP4Q8N2S1 1624 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms