RNA–Protein interactions for RNA: ENST00000412685.6

HCG18-233, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,552 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-233ENST00000412685 TRAPPC8Q9Y2L5 1435 aa22.75■■□□□ 1.23
HCG18-233ENST00000412685 PLA2R1Q13018 1463 aa22.75■■□□□ 1.23
HCG18-233ENST00000412685 HNRNPUQ00839 825 aaKnown RBP eCLIP22.75■■□□□ 1.23
HCG18-233ENST00000412685 ARID4BQ4LE39 1312 aaPredicted RBP22.75■■□□□ 1.23
HCG18-233ENST00000412685 MAGI2Q86UL8 1455 aa22.74■■□□□ 1.23
HCG18-233ENST00000412685 ARAP3Q8WWN8 1544 aa22.74■■□□□ 1.23
HCG18-233ENST00000412685 CCDC184Q52MB2 194 aa22.74■■□□□ 1.23
HCG18-233ENST00000412685 WDR7Q9Y4E6 1490 aa22.71■■□□□ 1.23
HCG18-233ENST00000412685 FKBP8Q14318 412 aa22.7■■□□□ 1.22
HCG18-233ENST00000412685 DHX29Q7Z478 1369 aaKnown RBP22.69■■□□□ 1.22
HCG18-233ENST00000412685 POLR3GLQ9BT43 218 aa22.69■■□□□ 1.22
HCG18-233ENST00000412685 MRS2Q9HD23 443 aa22.68■■□□□ 1.22
HCG18-233ENST00000412685 PRAG1Q86YV5 1406 aa22.68■■□□□ 1.22
HCG18-233ENST00000412685 ROCK2O75116 1388 aaKnown RBP22.68■■□□□ 1.22
HCG18-233ENST00000412685 SPAG9O60271 1321 aaKnown RBP22.67■■□□□ 1.22
HCG18-233ENST00000412685 ATP10AO60312 1499 aa22.67■■□□□ 1.22
HCG18-233ENST00000412685 RTEL1-TNFRSF6BF6WH68 1400 aa22.67■■□□□ 1.22
HCG18-233ENST00000412685 ST20-MTHFSA0A0A6YYL1 179 aa22.66■■□□□ 1.22
HCG18-233ENST00000412685 NEFLP07196 543 aa22.66■■□□□ 1.22
HCG18-233ENST00000412685 RGL3Q3MIN7 710 aa22.66■■□□□ 1.22
HCG18-233ENST00000412685 AFAP1Q8N556 730 aa22.65■■□□□ 1.22
HCG18-233ENST00000412685 ZFYVE16Q7Z3T8 1539 aa22.65■■□□□ 1.22
HCG18-233ENST00000412685 A2MP01023 1474 aa22.65■■□□□ 1.22
HCG18-233ENST00000412685 TRPM1Q7Z4N2 1603 aa22.64■■□□□ 1.22
HCG18-233ENST00000412685 ABCA9Q8IUA7 1624 aa22.62■■□□□ 1.21
HCG18-233ENST00000412685 FAM9BQ8IZU0 186 aa22.62■■□□□ 1.21
HCG18-233ENST00000412685 FANCAO15360 1455 aa22.62■■□□□ 1.21
HCG18-233ENST00000412685 BCANQ96GW7 911 aa22.6■■□□□ 1.21
HCG18-233ENST00000412685 GPRASP1Q5JY77 1395 aa22.58■■□□□ 1.21
HCG18-233ENST00000412685 ASXL2Q76L83 1435 aa22.57■■□□□ 1.2
HCG18-233ENST00000412685 NBPF1Q3BBV0 1214 aa22.56■■□□□ 1.2
HCG18-233ENST00000412685 INO80Q9ULG1 1556 aaPredicted RBP22.55■■□□□ 1.2
HCG18-233ENST00000412685 ATP7AQ04656 1500 aa22.55■■□□□ 1.2
HCG18-233ENST00000412685 ADGRL1O94910 1474 aa22.54■■□□□ 1.2
HCG18-233ENST00000412685 E9PCH4 1651 aa22.54■■□□□ 1.2
HCG18-233ENST00000412685 DEPDC5O75140 1603 aa22.54■■□□□ 1.2
HCG18-233ENST00000412685 LAMC1P11047 1609 aa22.54■■□□□ 1.2
HCG18-233ENST00000412685 EIF2AK4Q9P2K8 1649 aaKnown RBP22.54■■□□□ 1.2
HCG18-233ENST00000412685 CNGB1Q14028 1251 aaPredicted RBP22.53■■□□□ 1.2
HCG18-233ENST00000412685 SCAPERQ9BY12 1400 aa22.52■■□□□ 1.2
HCG18-233ENST00000412685 ZBED9Q6R2W3 1325 aa22.52■■□□□ 1.2
HCG18-233ENST00000412685 PRDM15P57071 1507 aaPredicted RBP22.51■■□□□ 1.19
HCG18-233ENST00000412685 OSCARQ8IYS5 282 aa22.5■■□□□ 1.19
HCG18-233ENST00000412685 TRPM2O94759 1503 aa22.49■■□□□ 1.19
HCG18-233ENST00000412685 PTPRTO14522 1441 aa22.47■■□□□ 1.19
HCG18-233ENST00000412685 TET3O43151 1660 aa22.46■■□□□ 1.19
HCG18-233ENST00000412685 KANK1Q14678 1352 aa22.46■■□□□ 1.19
HCG18-233ENST00000412685 MYT1LQ9UL68 1186 aa22.46■■□□□ 1.19
HCG18-233ENST00000412685 SPHKAPQ2M3C7 1700 aa22.46■■□□□ 1.19
HCG18-233ENST00000412685 VWDEQ8N2E2 1590 aa22.45■■□□□ 1.19
HCG18-233ENST00000412685 KIF3BO15066 747 aa22.44■■□□□ 1.18
HCG18-233ENST00000412685 NPM1P06748 294 aaKnown RBP eCLIP22.44■■□□□ 1.18
HCG18-233ENST00000412685 KTN1Q86UP2 1357 aaKnown RBP22.44■■□□□ 1.18
HCG18-233ENST00000412685 COL17A1Q9UMD9 1497 aaPredicted RBP22.44■■□□□ 1.18
HCG18-233ENST00000412685 RNF17Q9BXT8 1623 aaKnown RBP22.43■■□□□ 1.18
HCG18-233ENST00000412685 TESK2Q96S53 571 aa22.43■■□□□ 1.18
HCG18-233ENST00000412685 CEP152O94986 1710 aa22.42■■□□□ 1.18
HCG18-233ENST00000412685 CLTCL1P53675 1640 aa22.42■■□□□ 1.18
HCG18-233ENST00000412685 RALBP1Q15311 655 aa22.41■■□□□ 1.18
HCG18-233ENST00000412685 MADDQ8WXG6 1647 aa22.4■■□□□ 1.18
HCG18-233ENST00000412685 TMC1Q8TDI8 760 aa22.4■■□□□ 1.18
HCG18-233ENST00000412685 DISP3Q9P2K9 1392 aa22.4■■□□□ 1.18
HCG18-233ENST00000412685 TSHZ2Q9NRE2 1034 aa22.4■■□□□ 1.18
HCG18-233ENST00000412685 MROH1Q8NDA8 1641 aa22.39■■□□□ 1.18
HCG18-233ENST00000412685 PNISRQ8TF01 805 aaKnown RBP22.39■■□□□ 1.17
HCG18-233ENST00000412685 ZNF518AQ6AHZ1 1483 aa22.38■■□□□ 1.17
HCG18-233ENST00000412685 MYBBP1AQ9BQG0 1328 aaKnown RBP22.38■■□□□ 1.17
HCG18-233ENST00000412685 KIDINS220Q9ULH0 1771 aa22.38■■□□□ 1.17
HCG18-233ENST00000412685 STAC3Q96MF2 364 aa22.37■■□□□ 1.17
HCG18-233ENST00000412685 BRD4O60885 1362 aaPredicted RBP22.36■■□□□ 1.17
HCG18-233ENST00000412685 TMF1P82094 1093 aa22.35■■□□□ 1.17
HCG18-233ENST00000412685 CD109Q6YHK3 1445 aa22.35■■□□□ 1.17
HCG18-233ENST00000412685 IRX6P78412 446 aaPredicted RBP22.35■■□□□ 1.17
HCG18-233ENST00000412685 PER1O15534 1290 aaPredicted RBP22.34■■□□□ 1.17
HCG18-233ENST00000412685 PARD3Q8TEW0 1356 aa22.33■■□□□ 1.16
HCG18-233ENST00000412685 CFAP74Q9C0B2 1584 aa22.32■■□□□ 1.16
HCG18-233ENST00000412685 IQGAP1P46940 1657 aa22.31■■□□□ 1.16
HCG18-233ENST00000412685 NEURL4Q96JN8 1562 aa22.31■■□□□ 1.16
HCG18-233ENST00000412685 LRPPRCP42704 1394 aaKnown RBP22.31■■□□□ 1.16
HCG18-233ENST00000412685 EFCAB6Q5THR3 1501 aa22.31■■□□□ 1.16
HCG18-233ENST00000412685 POGZQ7Z3K3 1410 aa22.3■■□□□ 1.16
HCG18-233ENST00000412685 ERICH6BQ5W0A0 696 aa22.3■■□□□ 1.16
HCG18-233ENST00000412685 WASHC2CQ9Y4E1 1318 aa22.29■■□□□ 1.16
HCG18-233ENST00000412685 SMG6Q86US8 1419 aaKnown RBP22.29■■□□□ 1.16
HCG18-233ENST00000412685 NLRP13Q86W25 1043 aa22.28■■□□□ 1.16
HCG18-233ENST00000412685 UGGT1Q9NYU2 1555 aa22.27■■□□□ 1.16
HCG18-233ENST00000412685 SCAF11Q99590 1463 aaKnown RBP22.27■■□□□ 1.16
HCG18-233ENST00000412685 PANK3Q9H999 370 aa22.27■■□□□ 1.16
HCG18-233ENST00000412685 LMTK2Q8IWU2 1503 aa22.27■■□□□ 1.16
HCG18-233ENST00000412685 PPRC1Q5VV67 1664 aaKnown RBP22.27■■□□□ 1.16
HCG18-233ENST00000412685 MLH3Q9UHC1 1453 aa22.26■■□□□ 1.15
HCG18-233ENST00000412685 KIAA1210Q9ULL0 1709 aa22.23■■□□□ 1.15
HCG18-233ENST00000412685 NUDCQ9Y266 331 aa22.23■■□□□ 1.15
HCG18-233ENST00000412685 HECW2Q9P2P5 1572 aa22.23■■□□□ 1.15
HCG18-233ENST00000412685 FRMPD1Q5SYB0 1578 aa22.23■■□□□ 1.15
HCG18-233ENST00000412685 KIF1BO60333 1816 aa22.22■■□□□ 1.15
HCG18-233ENST00000412685 MYOM2P54296 1465 aa22.22■■□□□ 1.15
HCG18-233ENST00000412685 CC2D1BQ5T0F9 858 aaKnown RBP22.22■■□□□ 1.15
HCG18-233ENST00000412685 MAP3K4Q9Y6R4 1608 aa22.21■■□□□ 1.15
HCG18-233ENST00000412685 SENP3-EIF4A1A0A087X0R7 540 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms