RNA–Protein interactions for RNA: ENST00000412685.6

HCG18-233, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,552 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-233ENST00000412685 NISCHQ9Y2I1 1504 aa35.34■■■■□ 3.25
HCG18-233ENST00000412685 CCDC180Q9P1Z9 1646 aa30.32■■■□□ 2.44
HCG18-233ENST00000412685 ZCCHC6Q5VYS8 1495 aaKnown RBP29.83■■■□□ 2.37
HCG18-233ENST00000412685 SHROOM4Q9ULL8 1493 aa29.61■■■□□ 2.33
HCG18-233ENST00000412685 DCAF8L2P0C7V8 631 aa29.16■■■□□ 2.26
HCG18-233ENST00000412685 DCAF1Q9Y4B6 1507 aa29.11■■■□□ 2.25
HCG18-233ENST00000412685 SUPT5HO00267 1087 aaKnown RBP28.87■■■□□ 2.21
HCG18-233ENST00000412685 MYO15BQ96JP2 1530 aa28.44■■■□□ 2.14
HCG18-233ENST00000412685 ABCC9O60706 1549 aa28.22■■■□□ 2.11
HCG18-233ENST00000412685 SCRIBQ14160 1630 aa28.19■■■□□ 2.1
HCG18-233ENST00000412685 NACADO15069 1562 aa28.1■■■□□ 2.09
HCG18-233ENST00000412685 CHIC1Q5VXU3 224 aa27.97■■■□□ 2.07
HCG18-233ENST00000412685 RSF1Q96T23 1441 aaPredicted RBP27.77■■■□□ 2.04
HCG18-233ENST00000412685 RB1CC1Q8TDY2 1594 aa27.7■■■□□ 2.02
HCG18-233ENST00000412685 CECR2Q9BXF3 1484 aa27.5■■□□□ 1.99
HCG18-233ENST00000412685 MROH2BQ7Z745 1585 aa27.4■■□□□ 1.98
HCG18-233ENST00000412685 UNC13AQ9UPW8 1703 aa27.22■■□□□ 1.95
HCG18-233ENST00000412685 WIZO95785 1651 aa27.21■■□□□ 1.95
HCG18-233ENST00000412685 BAZ1AQ9NRL2 1556 aaPredicted RBP27.2■■□□□ 1.94
HCG18-233ENST00000412685 LOC105371045A0A1W2PR82 267 aa27.03■■□□□ 1.92
HCG18-233ENST00000412685 TRIM41Q8WV44 630 aa27■■□□□ 1.91
HCG18-233ENST00000412685 SMARCA4P51532 1647 aa26.99■■□□□ 1.91
HCG18-233ENST00000412685 BICRAQ9NZM4 1560 aa26.92■■□□□ 1.9
HCG18-233ENST00000412685 TOP2AP11388 1531 aaKnown RBP26.87■■□□□ 1.89
HCG18-233ENST00000412685 PABPN1Q86U42 306 aaKnown RBP eCLIP26.84■■□□□ 1.89
HCG18-233ENST00000412685 EIF4G1Q04637 1599 aaKnown RBP26.76■■□□□ 1.87
HCG18-233ENST00000412685 CCDC88BA6NC98 1476 aa26.68■■□□□ 1.86
HCG18-233ENST00000412685 SMARCA2P51531 1590 aa26.68■■□□□ 1.86
HCG18-233ENST00000412685 FAM9AQ8IZU1 332 aaPredicted RBP26.65■■□□□ 1.86
HCG18-233ENST00000412685 PCGF6Q9BYE7 350 aa26.61■■□□□ 1.85
HCG18-233ENST00000412685 PEG3Q9GZU2 1588 aa26.57■■□□□ 1.84
HCG18-233ENST00000412685 ABCC8Q09428 1581 aa26.43■■□□□ 1.82
HCG18-233ENST00000412685 HRCP23327 699 aa26.42■■□□□ 1.82
HCG18-233ENST00000412685 ATAD2BQ9ULI0 1458 aa26.38■■□□□ 1.81
HCG18-233ENST00000412685 EHMT2Q96KQ7 1210 aa26.34■■□□□ 1.81
HCG18-233ENST00000412685 TRIM26Q12899 539 aaPredicted RBP26.3■■□□□ 1.8
HCG18-233ENST00000412685 BAZ1BQ9UIG0 1483 aaKnown RBP26.28■■□□□ 1.8
HCG18-233ENST00000412685 SOGA1O94964 1423 aa26.11■■□□□ 1.77
HCG18-233ENST00000412685 WRNQ14191 1432 aaPredicted RBP eCLIP26.11■■□□□ 1.77
HCG18-233ENST00000412685 EEA1Q15075 1411 aa26.05■■□□□ 1.76
HCG18-233ENST00000412685 SYNJ1O43426 1573 aa25.98■■□□□ 1.75
HCG18-233ENST00000412685 NCAPD3P42695 1498 aa25.98■■□□□ 1.75
HCG18-233ENST00000412685 HMGXB3Q12766 1538 aa25.97■■□□□ 1.75
HCG18-233ENST00000412685 RUSC2Q8N2Y8 1516 aa25.97■■□□□ 1.75
HCG18-233ENST00000412685 CSRNP3Q8WYN3 585 aa25.96■■□□□ 1.75
HCG18-233ENST00000412685 TNIKQ9UKE5 1360 aa25.87■■□□□ 1.73
HCG18-233ENST00000412685 CEP162Q5TB80 1403 aa25.85■■□□□ 1.73
HCG18-233ENST00000412685 PPARGC1BQ86YN6 1023 aaKnown RBP25.8■■□□□ 1.72
HCG18-233ENST00000412685 GOLGA3Q08378 1498 aa25.8■■□□□ 1.72
HCG18-233ENST00000412685 UBTFP17480 764 aaKnown RBP25.76■■□□□ 1.71
HCG18-233ENST00000412685 TOP2BQ02880 1626 aa25.75■■□□□ 1.71
HCG18-233ENST00000412685 CEP164Q9UPV0 1460 aa25.71■■□□□ 1.71
HCG18-233ENST00000412685 KIF21BO75037 1637 aa25.7■■□□□ 1.7
HCG18-233ENST00000412685 BIVM-ERCC5R4GMW8 1640 aa25.68■■□□□ 1.7
HCG18-233ENST00000412685 CFTRP13569 1480 aa25.64■■□□□ 1.7
HCG18-233ENST00000412685 ZEB1P37275 1124 aaPredicted RBP25.59■■□□□ 1.69
HCG18-233ENST00000412685 CUX1P39880 1505 aa25.55■■□□□ 1.68
HCG18-233ENST00000412685 RAPGEF2Q9Y4G8 1499 aa25.52■■□□□ 1.68
HCG18-233ENST00000412685 CC2D2AQ9P2K1 1620 aa25.47■■□□□ 1.67
HCG18-233ENST00000412685 PRDM2Q13029 1718 aa25.46■■□□□ 1.67
HCG18-233ENST00000412685 CLIP1P30622 1438 aa25.46■■□□□ 1.67
HCG18-233ENST00000412685 CADPSQ9ULU8 1353 aa25.41■■□□□ 1.66
HCG18-233ENST00000412685 TTBK1Q5TCY1 1321 aaPredicted RBP25.41■■□□□ 1.66
HCG18-233ENST00000412685 PRXQ9BXM0 1461 aa25.38■■□□□ 1.65
HCG18-233ENST00000412685 ERICH3Q5RHP9 1530 aa25.37■■□□□ 1.65
HCG18-233ENST00000412685 KIF27Q86VH2 1401 aa25.36■■□□□ 1.65
HCG18-233ENST00000412685 VPS8Q8N3P4 1428 aa25.32■■□□□ 1.64
HCG18-233ENST00000412685 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.24■■□□□ 1.63
HCG18-233ENST00000412685 RANGAP1P46060 587 aaPredicted RBP25.22■■□□□ 1.63
HCG18-233ENST00000412685 CCER1Q8TC90 406 aaPredicted RBP25.19■■□□□ 1.62
HCG18-233ENST00000412685 CUX2O14529 1486 aa25.15■■□□□ 1.62
HCG18-233ENST00000412685 FANCD2Q9BXW9 1451 aa25.15■■□□□ 1.62
HCG18-233ENST00000412685 FGD5Q6ZNL6 1462 aa25.15■■□□□ 1.62
HCG18-233ENST00000412685 APLP2Q06481 763 aa25.13■■□□□ 1.61
HCG18-233ENST00000412685 ARAP1Q96P48 1450 aa25.1■■□□□ 1.61
HCG18-233ENST00000412685 IGF1RP08069 1367 aa25.08■■□□□ 1.61
HCG18-233ENST00000412685 NESP48681 1621 aa25.03■■□□□ 1.6
HCG18-233ENST00000412685 DNMBPQ6XZF7 1577 aa25.01■■□□□ 1.59
HCG18-233ENST00000412685 CARMIL1Q5VZK9 1371 aa24.97■■□□□ 1.59
HCG18-233ENST00000412685 TOPBP1Q92547 1522 aa24.95■■□□□ 1.59
HCG18-233ENST00000412685 ARHGAP35Q9NRY4 1499 aa24.95■■□□□ 1.59
HCG18-233ENST00000412685 LAMC3Q9Y6N6 1575 aa24.94■■□□□ 1.58
HCG18-233ENST00000412685 POLA1P09884 1462 aaPredicted RBP24.91■■□□□ 1.58
HCG18-233ENST00000412685 HNRNPUL2Q1KMD3 747 aaKnown RBP24.9■■□□□ 1.58
HCG18-233ENST00000412685 ABCA10Q8WWZ4 1543 aa24.9■■□□□ 1.58
HCG18-233ENST00000412685 RAD54L2Q9Y4B4 1467 aa24.89■■□□□ 1.58
HCG18-233ENST00000412685 KANK4Q5T7N3 995 aaPredicted RBP24.83■■□□□ 1.57
HCG18-233ENST00000412685 URB2Q14146 1524 aaKnown RBP24.81■■□□□ 1.56
HCG18-233ENST00000412685 DNAJC5BQ9UF47 199 aa24.79■■□□□ 1.56
HCG18-233ENST00000412685 PDS5BQ9NTI5 1447 aa24.77■■□□□ 1.56
HCG18-233ENST00000412685 CUL7Q14999 1698 aa24.72■■□□□ 1.55
HCG18-233ENST00000412685 WDR97A6NE52 1622 aa24.71■■□□□ 1.55
HCG18-233ENST00000412685 RRBP1Q9P2E9 1410 aaKnown RBP24.68■■□□□ 1.54
HCG18-233ENST00000412685 MAP3K1Q13233 1512 aa24.65■■□□□ 1.54
HCG18-233ENST00000412685 KIF21AQ7Z4S6 1674 aa24.65■■□□□ 1.54
HCG18-233ENST00000412685 TIAM1Q13009 1591 aa24.64■■□□□ 1.53
HCG18-233ENST00000412685 FHAD1B1AJZ9 1412 aa24.62■■□□□ 1.53
HCG18-233ENST00000412685 ABCA5Q8WWZ7 1642 aa24.62■■□□□ 1.53
HCG18-233ENST00000412685 TDRD9Q8NDG6 1382 aaKnown RBP24.6■■□□□ 1.53
HCG18-233ENST00000412685 CTTNBP2Q8WZ74 1663 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms