RNA–Protein interactions for RNA: ENST00000411849.1

HMGN1P20-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 20, humanhuman

BASIC

Gene HMGN1P20, Length 300 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P20-201ENST00000411849 DNMT1P26358 1616 aaKnown RBP9.89□□□□□ -0.83
HMGN1P20-201ENST00000411849 SPAG9O60271 1321 aaKnown RBP9.89□□□□□ -0.83
HMGN1P20-201ENST00000411849 CPS1P31327 1500 aa9.89□□□□□ -0.83
HMGN1P20-201ENST00000411849 EHMT2Q96KQ7 1210 aa9.89□□□□□ -0.83
HMGN1P20-201ENST00000411849 A2MP01023 1474 aa9.89□□□□□ -0.83
HMGN1P20-201ENST00000411849 A2ML1A8K2U0 1454 aa9.88□□□□□ -0.83
HMGN1P20-201ENST00000411849 FYCO1Q9BQS8 1478 aa9.88□□□□□ -0.83
HMGN1P20-201ENST00000411849 ZNF777Q9ULD5 760 aaPredicted RBP9.88□□□□□ -0.83
HMGN1P20-201ENST00000411849 KIAA1107Q9UPP5 1409 aa9.87□□□□□ -0.83
HMGN1P20-201ENST00000411849 GPATCH8Q9UKJ3 1502 aaKnown RBP9.87□□□□□ -0.83
HMGN1P20-201ENST00000411849 NEURL4Q96JN8 1562 aa9.86□□□□□ -0.83
HMGN1P20-201ENST00000411849 TOM1O60784 492 aa9.85□□□□□ -0.83
HMGN1P20-201ENST00000411849 HNRNPMP52272 730 aaKnown RBP eCLIP9.85□□□□□ -0.83
HMGN1P20-201ENST00000411849 U3KPZ7 1027 aaPredicted RBP9.85□□□□□ -0.83
HMGN1P20-201ENST00000411849 FAM135AQ9P2D6 1515 aa9.85□□□□□ -0.83
HMGN1P20-201ENST00000411849 HSPA1LP34931 641 aa9.84□□□□□ -0.83
HMGN1P20-201ENST00000411849 GGT6Q6P531 493 aa9.84□□□□□ -0.83
HMGN1P20-201ENST00000411849 SHANK2Q9UPX8 1470 aa9.84□□□□□ -0.83
HMGN1P20-201ENST00000411849 DEPDC5O75140 1603 aa9.83□□□□□ -0.84
HMGN1P20-201ENST00000411849 PIP4K2BP78356 416 aa9.83□□□□□ -0.84
HMGN1P20-201ENST00000411849 CFDP1Q9UEE9 299 aaPredicted RBP9.83□□□□□ -0.84
HMGN1P20-201ENST00000411849 CCNB3Q8WWL7 1395 aa9.82□□□□□ -0.84
HMGN1P20-201ENST00000411849 IQGAP1P46940 1657 aa9.82□□□□□ -0.84
HMGN1P20-201ENST00000411849 KDM5DQ9BY66 1539 aa9.82□□□□□ -0.84
HMGN1P20-201ENST00000411849 SYNMO15061 1565 aa9.81□□□□□ -0.84
HMGN1P20-201ENST00000411849 VWDEQ8N2E2 1590 aa9.81□□□□□ -0.84
HMGN1P20-201ENST00000411849 RNF17Q9BXT8 1623 aaKnown RBP9.81□□□□□ -0.84
HMGN1P20-201ENST00000411849 TIAM1Q13009 1591 aa9.8□□□□□ -0.84
HMGN1P20-201ENST00000411849 PZPP20742 1482 aa9.8□□□□□ -0.84
HMGN1P20-201ENST00000411849 TNRQ92752 1358 aa9.8□□□□□ -0.84
HMGN1P20-201ENST00000411849 RTEL1-TNFRSF6BF6WH68 1400 aa9.8□□□□□ -0.84
HMGN1P20-201ENST00000411849 STRCP1A6NGW2 1772 aa9.79□□□□□ -0.84
HMGN1P20-201ENST00000411849 UGGT1Q9NYU2 1555 aa9.79□□□□□ -0.84
HMGN1P20-201ENST00000411849 MED14O60244 1454 aa9.79□□□□□ -0.84
HMGN1P20-201ENST00000411849 NLRP1Q9C000 1473 aa9.79□□□□□ -0.84
HMGN1P20-201ENST00000411849 ALKQ9UM73 1620 aa9.78□□□□□ -0.84
HMGN1P20-201ENST00000411849 ZC3H13Q5T200 1668 aaKnown RBP9.78□□□□□ -0.84
HMGN1P20-201ENST00000411849 ANKLE2Q86XL3 938 aa9.78□□□□□ -0.84
HMGN1P20-201ENST00000411849 EHBP1L1Q8N3D4 1523 aa9.77□□□□□ -0.84
HMGN1P20-201ENST00000411849 MTUS2Q5JR59 1369 aa9.77□□□□□ -0.84
HMGN1P20-201ENST00000411849 DHX29Q7Z478 1369 aaKnown RBP9.77□□□□□ -0.84
HMGN1P20-201ENST00000411849 NPHP4O75161 1426 aaPredicted RBP9.77□□□□□ -0.85
HMGN1P20-201ENST00000411849 THEMISQ8N1K5 641 aaPredicted RBP9.77□□□□□ -0.85
HMGN1P20-201ENST00000411849 MBD5Q9P267 1494 aa9.77□□□□□ -0.85
HMGN1P20-201ENST00000411849 CFAP65Q6ZU64 1925 aaKnown RBP9.76□□□□□ -0.85
HMGN1P20-201ENST00000411849 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.75□□□□□ -0.85
HMGN1P20-201ENST00000411849 KIF3BO15066 747 aa9.75□□□□□ -0.85
HMGN1P20-201ENST00000411849 WASHC2CQ9Y4E1 1318 aa9.75□□□□□ -0.85
HMGN1P20-201ENST00000411849 XIRP1Q702N8 1843 aaKnown RBP9.75□□□□□ -0.85
HMGN1P20-201ENST00000411849 MIA2Q96PC5 1412 aa9.74□□□□□ -0.85
HMGN1P20-201ENST00000411849 CCDC141Q6ZP82 1450 aa9.74□□□□□ -0.85
HMGN1P20-201ENST00000411849 UBR1Q8IWV7 1749 aa9.74□□□□□ -0.85
HMGN1P20-201ENST00000411849 LRRC7Q96NW7 1537 aa9.74□□□□□ -0.85
HMGN1P20-201ENST00000411849 FBXO31Q5XUX0 539 aaPredicted RBP9.74□□□□□ -0.85
HMGN1P20-201ENST00000411849 SPINK5Q9NQ38 1064 aaPredicted RBP9.74□□□□□ -0.85
HMGN1P20-201ENST00000411849 EIF2AK4Q9P2K8 1649 aaKnown RBP9.73□□□□□ -0.85
HMGN1P20-201ENST00000411849 ZNF644Q9H582 1327 aaPredicted RBP9.73□□□□□ -0.85
HMGN1P20-201ENST00000411849 ARHGEF5Q12774 1597 aa9.72□□□□□ -0.85
HMGN1P20-201ENST00000411849 CEP152O94986 1710 aa9.72□□□□□ -0.85
HMGN1P20-201ENST00000411849 CAMSAP2Q08AD1 1489 aa9.72□□□□□ -0.85
HMGN1P20-201ENST00000411849 DSG3P32926 999 aa9.71□□□□□ -0.86
HMGN1P20-201ENST00000411849 RSPH4AQ5TD94 716 aa9.71□□□□□ -0.86
HMGN1P20-201ENST00000411849 CEP162Q5TB80 1403 aa9.71□□□□□ -0.86
HMGN1P20-201ENST00000411849 KCNA4P22459 653 aa9.7□□□□□ -0.86
HMGN1P20-201ENST00000411849 ABCC3O15438 1527 aa9.7□□□□□ -0.86
HMGN1P20-201ENST00000411849 SLC4A2P04920 1241 aa9.69□□□□□ -0.86
HMGN1P20-201ENST00000411849 MAST1Q9Y2H9 1570 aa9.68□□□□□ -0.86
HMGN1P20-201ENST00000411849 ERVK-7P63135 1459 aa9.67□□□□□ -0.86
HMGN1P20-201ENST00000411849 NCOA2Q15596 1464 aa9.67□□□□□ -0.86
HMGN1P20-201ENST00000411849 SCAF11Q99590 1463 aaKnown RBP9.67□□□□□ -0.86
HMGN1P20-201ENST00000411849 KDM5AP29375 1690 aaKnown RBP9.67□□□□□ -0.86
HMGN1P20-201ENST00000411849 TSPY4P0CV99 314 aa9.66□□□□□ -0.86
HMGN1P20-201ENST00000411849 TSPY10P0CW01 314 aa9.66□□□□□ -0.86
HMGN1P20-201ENST00000411849 ROBO1Q9Y6N7 1651 aa9.66□□□□□ -0.86
HMGN1P20-201ENST00000411849 MROH1Q8NDA8 1641 aa9.66□□□□□ -0.86
HMGN1P20-201ENST00000411849 SLIT1O75093 1534 aa9.66□□□□□ -0.86
HMGN1P20-201ENST00000411849 ARHGAP23Q9P227 1491 aa9.65□□□□□ -0.87
HMGN1P20-201ENST00000411849 PIK3C2BO00750 1634 aa9.64□□□□□ -0.87
HMGN1P20-201ENST00000411849 RGS17Q9UGC6 210 aaPredicted RBP9.64□□□□□ -0.87
HMGN1P20-201ENST00000411849 SETD1AO15047 1707 aaKnown RBP9.64□□□□□ -0.87
HMGN1P20-201ENST00000411849 FAM135BQ49AJ0 1406 aa9.64□□□□□ -0.87
HMGN1P20-201ENST00000411849 PHLPP1O60346 1717 aa9.62□□□□□ -0.87
HMGN1P20-201ENST00000411849 LRRC9Q6ZRR7 1453 aa9.62□□□□□ -0.87
HMGN1P20-201ENST00000411849 EID1Q9Y6B2 187 aa9.62□□□□□ -0.87
HMGN1P20-201ENST00000411849 PRDM15P57071 1507 aaPredicted RBP9.61□□□□□ -0.87
HMGN1P20-201ENST00000411849 DUOX2Q9NRD8 1548 aa9.61□□□□□ -0.87
HMGN1P20-201ENST00000411849 CROCC2H7BZ55 1655 aa9.61□□□□□ -0.87
HMGN1P20-201ENST00000411849 TXNDC2Q86VQ3 553 aa9.61□□□□□ -0.87
HMGN1P20-201ENST00000411849 ARHGAP31Q2M1Z3 1444 aa9.6□□□□□ -0.87
HMGN1P20-201ENST00000411849 CAPN15O75808 1086 aa9.6□□□□□ -0.87
HMGN1P20-201ENST00000411849 LTKP29376 864 aa9.59□□□□□ -0.87
HMGN1P20-201ENST00000411849 POTEAQ6S8J7 498 aa9.59□□□□□ -0.87
HMGN1P20-201ENST00000411849 EFCAB6Q5THR3 1501 aa9.59□□□□□ -0.87
HMGN1P20-201ENST00000411849 NWD1Q149M9 1564 aa9.58□□□□□ -0.88
HMGN1P20-201ENST00000411849 MAP3K1Q13233 1512 aa9.58□□□□□ -0.88
HMGN1P20-201ENST00000411849 TMEM94Q12767 1356 aa9.58□□□□□ -0.88
HMGN1P20-201ENST00000411849 TMEM2Q9UHN6 1383 aa9.58□□□□□ -0.88
HMGN1P20-201ENST00000411849 CHD2O14647 1828 aaKnown RBP9.58□□□□□ -0.88
HMGN1P20-201ENST00000411849 NKTRP30414 1462 aaKnown RBP9.58□□□□□ -0.88
HMGN1P20-201ENST00000411849 TET3O43151 1660 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms