RNA–Protein interactions for RNA: ENST00000410055.5

PDK1-203, Transcript of pyruvate dehydrogenase kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDK1, Length 2,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK1-203ENST00000410055 ABCA8O94911 1581 aa22.47■■□□□ 1.19
PDK1-203ENST00000410055 ADCY10Q96PN6 1610 aa22.46■■□□□ 1.19
PDK1-203ENST00000410055 BCORL1Q5H9F3 1711 aa22.44■■□□□ 1.18
PDK1-203ENST00000410055 DHX29Q7Z478 1369 aaKnown RBP22.44■■□□□ 1.18
PDK1-203ENST00000410055 CROCC2H7BZ55 1655 aa22.44■■□□□ 1.18
PDK1-203ENST00000410055 ROCK2O75116 1388 aaKnown RBP22.44■■□□□ 1.18
PDK1-203ENST00000410055 PPP4R2Q9NY27 417 aa22.43■■□□□ 1.18
PDK1-203ENST00000410055 PODXL2Q9NZ53 605 aa22.43■■□□□ 1.18
PDK1-203ENST00000410055 NBPF1Q3BBV0 1214 aa22.42■■□□□ 1.18
PDK1-203ENST00000410055 MBD5Q9P267 1494 aa22.42■■□□□ 1.18
PDK1-203ENST00000410055 ARHGAP5Q13017 1502 aa22.36■■□□□ 1.17
PDK1-203ENST00000410055 CCDC144AA2RUR9 1427 aa22.36■■□□□ 1.17
PDK1-203ENST00000410055 CCDC141Q6ZP82 1450 aa22.35■■□□□ 1.17
PDK1-203ENST00000410055 KDM5CP41229 1560 aa22.34■■□□□ 1.17
PDK1-203ENST00000410055 SHANK2Q9UPX8 1470 aa22.34■■□□□ 1.17
PDK1-203ENST00000410055 PNISRQ8TF01 805 aaKnown RBP22.33■■□□□ 1.17
PDK1-203ENST00000410055 RALGAPBQ86X10 1494 aa22.32■■□□□ 1.16
PDK1-203ENST00000410055 SYCP2Q9BX26 1530 aa22.32■■□□□ 1.16
PDK1-203ENST00000410055 RSPH4AQ5TD94 716 aa22.32■■□□□ 1.16
PDK1-203ENST00000410055 SAMD9LQ8IVG5 1584 aa22.32■■□□□ 1.16
PDK1-203ENST00000410055 CC2D1BQ5T0F9 858 aaKnown RBP22.31■■□□□ 1.16
PDK1-203ENST00000410055 FAM135AQ9P2D6 1515 aa22.3■■□□□ 1.16
PDK1-203ENST00000410055 UHRF1BP1Q6BDS2 1440 aa22.29■■□□□ 1.16
PDK1-203ENST00000410055 NUDCQ9Y266 331 aa22.29■■□□□ 1.16
PDK1-203ENST00000410055 POLR1AO95602 1720 aaPredicted RBP22.28■■□□□ 1.16
PDK1-203ENST00000410055 ARID4BQ4LE39 1312 aaPredicted RBP22.28■■□□□ 1.16
PDK1-203ENST00000410055 CDC42BPBQ9Y5S2 1711 aa22.28■■□□□ 1.16
PDK1-203ENST00000410055 PLEKHH2Q8IVE3 1493 aa22.28■■□□□ 1.16
PDK1-203ENST00000410055 ERCC6L2Q5T890 1561 aa22.27■■□□□ 1.16
PDK1-203ENST00000410055 BRPF3Q9ULD4 1205 aa22.25■■□□□ 1.15
PDK1-203ENST00000410055 CHD1O14646 1710 aa22.24■■□□□ 1.15
PDK1-203ENST00000410055 MYBBP1AQ9BQG0 1328 aaKnown RBP22.24■■□□□ 1.15
PDK1-203ENST00000410055 TTC37Q6PGP7 1564 aa22.24■■□□□ 1.15
PDK1-203ENST00000410055 AFAP1Q8N556 730 aa22.23■■□□□ 1.15
PDK1-203ENST00000410055 ARHGEF5Q12774 1597 aa22.22■■□□□ 1.15
PDK1-203ENST00000410055 ARHGEF12Q9NZN5 1544 aa22.22■■□□□ 1.15
PDK1-203ENST00000410055 RALBP1Q15311 655 aa22.21■■□□□ 1.15
PDK1-203ENST00000410055 EFCAB2Q5VUJ9 269 aa22.21■■□□□ 1.15
PDK1-203ENST00000410055 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.2■■□□□ 1.151e-6■■■■■ 29.5
PDK1-203ENST00000410055 PREX2Q70Z35 1606 aa22.2■■□□□ 1.14
PDK1-203ENST00000410055 PANK3Q9H999 370 aa22.19■■□□□ 1.14
PDK1-203ENST00000410055 SMG6Q86US8 1419 aaKnown RBP22.19■■□□□ 1.14
PDK1-203ENST00000410055 PRAG1Q86YV5 1406 aa22.19■■□□□ 1.14
PDK1-203ENST00000410055 KDM5DQ9BY66 1539 aa22.19■■□□□ 1.14
PDK1-203ENST00000410055 PLA2R1Q13018 1463 aa22.18■■□□□ 1.14
PDK1-203ENST00000410055 VSIG10Q8N0Z9 540 aa22.17■■□□□ 1.14
PDK1-203ENST00000410055 KTN1Q86UP2 1357 aaKnown RBP22.17■■□□□ 1.14
PDK1-203ENST00000410055 ZMYND15Q9H091 742 aa22.17■■□□□ 1.14
PDK1-203ENST00000410055 DISP3Q9P2K9 1392 aa22.15■■□□□ 1.14
PDK1-203ENST00000410055 NLRP13Q86W25 1043 aa22.15■■□□□ 1.14
PDK1-203ENST00000410055 A2MP01023 1474 aa22.14■■□□□ 1.14
PDK1-203ENST00000410055 ZBTB47Q9UFB7 747 aaPredicted RBP22.14■■□□□ 1.13
PDK1-203ENST00000410055 SPAG9O60271 1321 aaKnown RBP22.13■■□□□ 1.13
PDK1-203ENST00000410055 BRD4O60885 1362 aaPredicted RBP22.13■■□□□ 1.13
PDK1-203ENST00000410055 TMF1P82094 1093 aa22.12■■□□□ 1.13
PDK1-203ENST00000410055 CDCA7LQ96GN5 454 aa22.11■■□□□ 1.13
PDK1-203ENST00000410055 TESK2Q96S53 571 aa22.11■■□□□ 1.13
PDK1-203ENST00000410055 TRAPPC8Q9Y2L5 1435 aa22.11■■□□□ 1.13
PDK1-203ENST00000410055 PER1O15534 1290 aaPredicted RBP22.1■■□□□ 1.13
PDK1-203ENST00000410055 LAS1LQ9Y4W2 734 aaKnown RBP22.1■■□□□ 1.13
PDK1-203ENST00000410055 ABCC2Q92887 1545 aa22.09■■□□□ 1.13
PDK1-203ENST00000410055 DAXXQ9UER7 740 aaPredicted RBP22.09■■□□□ 1.13
PDK1-203ENST00000410055 ANP32AP39687 249 aaKnown RBP22.07■■□□□ 1.12
PDK1-203ENST00000410055 IPO9Q96P70 1041 aaKnown RBP22.07■■□□□ 1.12
PDK1-203ENST00000410055 NEFMP07197 916 aa22.06■■□□□ 1.12
PDK1-203ENST00000410055 KIF3BO15066 747 aa22.05■■□□□ 1.12
PDK1-203ENST00000410055 RCAN3Q9UKA8 241 aa22.05■■□□□ 1.12
PDK1-203ENST00000410055 MYO5CQ9NQX4 1742 aa22.05■■□□□ 1.12
PDK1-203ENST00000410055 PLCH2O75038 1416 aa22.05■■□□□ 1.12
PDK1-203ENST00000410055 EXOC6Q8TAG9 804 aa22.05■■□□□ 1.12
PDK1-203ENST00000410055 LRPPRCP42704 1394 aaKnown RBP22.05■■□□□ 1.12
PDK1-203ENST00000410055 TRPM1Q7Z4N2 1603 aa22.04■■□□□ 1.12
PDK1-203ENST00000410055 ERBINQ96RT1 1412 aa22.04■■□□□ 1.12
PDK1-203ENST00000410055 PLIN1O60240 522 aa22.04■■□□□ 1.12
PDK1-203ENST00000410055 PARD3Q8TEW0 1356 aa22.02■■□□□ 1.11
PDK1-203ENST00000410055 KNSTRNQ9Y448 316 aa22.02■■□□□ 1.11
PDK1-203ENST00000410055 RRP1P56182 461 aaKnown RBP22.01■■□□□ 1.11
PDK1-203ENST00000410055 DUOX2Q9NRD8 1548 aa22.01■■□□□ 1.11
PDK1-203ENST00000410055 GLIPR1L2Q4G1C9 344 aa22■■□□□ 1.11
PDK1-203ENST00000410055 CHGAP10645 457 aaKnown RBP22■■□□□ 1.11
PDK1-203ENST00000410055 RNF123Q5XPI4 1314 aa21.99■■□□□ 1.11
PDK1-203ENST00000410055 UNC13BO14795 1591 aa21.99■■□□□ 1.11
PDK1-203ENST00000410055 GPRASP1Q5JY77 1395 aa21.98■■□□□ 1.11
PDK1-203ENST00000410055 ADAMTS8Q9UP79 889 aa21.97■■□□□ 1.11
PDK1-203ENST00000410055 SHROOM2Q13796 1616 aa21.96■■□□□ 1.11
PDK1-203ENST00000410055 COL17A1Q9UMD9 1497 aaPredicted RBP21.96■■□□□ 1.11
PDK1-203ENST00000410055 ZCCHC11Q5TAX3 1644 aaKnown RBP21.96■■□□□ 1.11
PDK1-203ENST00000410055 MAST1Q9Y2H9 1570 aa21.95■■□□□ 1.11
PDK1-203ENST00000410055 SENP3Q9H4L4 574 aaPredicted RBP21.95■■□□□ 1.1
PDK1-203ENST00000410055 IQGAP3Q86VI3 1631 aa21.95■■□□□ 1.1
PDK1-203ENST00000410055 A0A0U1RQG5 324 aaPredicted RBP21.95■■□□□ 1.1
PDK1-203ENST00000410055 NPM2Q86SE8 214 aaKnown RBP21.95■■□□□ 1.1
PDK1-203ENST00000410055 RSPH6AQ9H0K4 717 aa21.94■■□□□ 1.1
PDK1-203ENST00000410055 SCAPERQ9BY12 1400 aa21.93■■□□□ 1.1
PDK1-203ENST00000410055 WDR43Q15061 677 aaKnown RBP eCLIP21.93■■□□□ 1.1
PDK1-203ENST00000410055 PLXNC1O60486 1568 aa21.93■■□□□ 1.1
PDK1-203ENST00000410055 CFAP70Q5T0N1 1121 aa21.92■■□□□ 1.1
PDK1-203ENST00000410055 WASHC2CQ9Y4E1 1318 aa21.91■■□□□ 1.1
PDK1-203ENST00000410055 E9PCH4 1651 aa21.91■■□□□ 1.1
PDK1-203ENST00000410055 PRDM15P57071 1507 aaPredicted RBP21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 200.1 ms