RNA–Protein interactions for RNA: ENST00000410017.5

COPS7B-206, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3 BASIC

Gene COPS7B, Length 2,051 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-206ENST00000410017 ANKRD30AQ9BXX3 1397 aa21.78■■□□□ 1.08
COPS7B-206ENST00000410017 SENP3-EIF4A1A0A087X0R7 540 aa21.76■■□□□ 1.07
COPS7B-206ENST00000410017 ST20-MTHFSA0A0A6YYL1 179 aa21.76■■□□□ 1.07
COPS7B-206ENST00000410017 CHMP7Q8WUX9 453 aaPredicted RBP21.76■■□□□ 1.07
COPS7B-206ENST00000410017 ITSN2Q9NZM3 1697 aa21.76■■□□□ 1.07
COPS7B-206ENST00000410017 CROCC2H7BZ55 1655 aa21.75■■□□□ 1.07
COPS7B-206ENST00000410017 GSE1Q14687 1217 aa21.75■■□□□ 1.07
COPS7B-206ENST00000410017 ARID3CA6NKF2 412 aa21.75■■□□□ 1.07
COPS7B-206ENST00000410017 CFDP1Q9UEE9 299 aaPredicted RBP21.75■■□□□ 1.07
COPS7B-206ENST00000410017 TROQ12816 1431 aaPredicted RBP21.74■■□□□ 1.07
COPS7B-206ENST00000410017 SYNJ2O15056 1496 aa21.74■■□□□ 1.07
COPS7B-206ENST00000410017 RAPGEF6Q8TEU7 1601 aa21.74■■□□□ 1.07
COPS7B-206ENST00000410017 KIAA0556O60303 1618 aa21.73■■□□□ 1.07
COPS7B-206ENST00000410017 ANKRD50Q9ULJ7 1429 aa21.73■■□□□ 1.07
COPS7B-206ENST00000410017 KDM5DQ9BY66 1539 aa21.72■■□□□ 1.07
COPS7B-206ENST00000410017 GPATCH8Q9UKJ3 1502 aaKnown RBP21.72■■□□□ 1.07
COPS7B-206ENST00000410017 OSCARQ8IYS5 282 aa21.71■■□□□ 1.07
COPS7B-206ENST00000410017 BLMP54132 1417 aaPredicted RBP21.71■■□□□ 1.07
COPS7B-206ENST00000410017 DISP1Q96F81 1524 aa21.71■■□□□ 1.07
COPS7B-206ENST00000410017 PLEKHH2Q8IVE3 1493 aa21.71■■□□□ 1.07
COPS7B-206ENST00000410017 KIAA0586Q9BVV6 1533 aa21.69■■□□□ 1.06
COPS7B-206ENST00000410017 PER1O15534 1290 aaPredicted RBP21.68■■□□□ 1.06
COPS7B-206ENST00000410017 RTN4Q9NQC3 1192 aaKnown RBP21.68■■□□□ 1.06
COPS7B-206ENST00000410017 ADCY10Q96PN6 1610 aa21.68■■□□□ 1.06
COPS7B-206ENST00000410017 NFKBIBQ15653 356 aa21.68■■□□□ 1.06
COPS7B-206ENST00000410017 CDCA7LQ96GN5 454 aa21.68■■□□□ 1.06
COPS7B-206ENST00000410017 CEP170Q5SW79 1584 aa21.68■■□□□ 1.06
COPS7B-206ENST00000410017 CRBNQ96SW2 442 aa21.67■■□□□ 1.06
COPS7B-206ENST00000410017 NUP155O75694 1391 aa21.66■■□□□ 1.06
COPS7B-206ENST00000410017 SHANK2Q9UPX8 1470 aa21.66■■□□□ 1.06
COPS7B-206ENST00000410017 KDM2BQ8NHM5 1336 aa21.66■■□□□ 1.06
COPS7B-206ENST00000410017 PRG4Q92954 1404 aaPredicted RBP21.66■■□□□ 1.06
COPS7B-206ENST00000410017 GRIN2AQ12879 1464 aa21.65■■□□□ 1.06
COPS7B-206ENST00000410017 PTPRGP23470 1445 aa21.63■■□□□ 1.05
COPS7B-206ENST00000410017 CENPQQ7L2Z9 268 aaPredicted RBP21.63■■□□□ 1.05
COPS7B-206ENST00000410017 DNAJC5Q9H3Z4 198 aa21.63■■□□□ 1.05
COPS7B-206ENST00000410017 PLIN1O60240 522 aa21.62■■□□□ 1.05
COPS7B-206ENST00000410017 DCAF11Q8TEB1 546 aa21.62■■□□□ 1.05
COPS7B-206ENST00000410017 DAXXQ9UER7 740 aaPredicted RBP21.6■■□□□ 1.05
COPS7B-206ENST00000410017 KDM2AQ9Y2K7 1162 aa21.6■■□□□ 1.05
COPS7B-206ENST00000410017 FAM161AQ3B820 660 aa21.59■■□□□ 1.05
COPS7B-206ENST00000410017 BRPF3Q9ULD4 1205 aa21.59■■□□□ 1.05
COPS7B-206ENST00000410017 GPRASP1Q5JY77 1395 aa21.58■■□□□ 1.05
COPS7B-206ENST00000410017 TRPM1Q7Z4N2 1603 aa21.57■■□□□ 1.04
COPS7B-206ENST00000410017 PRAG1Q86YV5 1406 aa21.57■■□□□ 1.04
COPS7B-206ENST00000410017 FRAT1Q92837 279 aaPredicted RBP21.57■■□□□ 1.04
COPS7B-206ENST00000410017 ZNF777Q9ULD5 760 aaPredicted RBP21.56■■□□□ 1.04
COPS7B-206ENST00000410017 LAMC1P11047 1609 aa21.56■■□□□ 1.04
COPS7B-206ENST00000410017 C9orf84Q5VXU9 1444 aa21.56■■□□□ 1.04
COPS7B-206ENST00000410017 COL17A1Q9UMD9 1497 aaPredicted RBP21.55■■□□□ 1.04
COPS7B-206ENST00000410017 C8orf34Q49A92 452 aa21.54■■□□□ 1.04
COPS7B-206ENST00000410017 NUP160Q12769 1436 aa21.53■■□□□ 1.04
COPS7B-206ENST00000410017 SKAP1Q86WV1 359 aa21.51■■□□□ 1.03
COPS7B-206ENST00000410017 CLASP1Q7Z460 1538 aa21.51■■□□□ 1.03
COPS7B-206ENST00000410017 C20orf194Q5TEA3 1177 aa21.51■■□□□ 1.03
COPS7B-206ENST00000410017 CDC42BPAQ5VT25 1732 aa21.5■■□□□ 1.03
COPS7B-206ENST00000410017 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.5■■□□□ 1.03
COPS7B-206ENST00000410017 TSPY4P0CV99 314 aa21.49■■□□□ 1.03
COPS7B-206ENST00000410017 TSPY10P0CW01 314 aa21.49■■□□□ 1.03
COPS7B-206ENST00000410017 SLC4A3P48751 1232 aa21.49■■□□□ 1.03
COPS7B-206ENST00000410017 TESK2Q96S53 571 aa21.49■■□□□ 1.03
COPS7B-206ENST00000410017 PRDM15P57071 1507 aaPredicted RBP21.48■■□□□ 1.03
COPS7B-206ENST00000410017 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.48■■□□□ 1.03
COPS7B-206ENST00000410017 CC2D1BQ5T0F9 858 aaKnown RBP21.48■■□□□ 1.03
COPS7B-206ENST00000410017 DUSP27Q5VZP5 1158 aa21.47■■□□□ 1.03
COPS7B-206ENST00000410017 UBE2Q2Q8WVN8 375 aa21.47■■□□□ 1.03
COPS7B-206ENST00000410017 PANK3Q9H999 370 aa21.47■■□□□ 1.03
COPS7B-206ENST00000410017 ABCC10Q5T3U5 1492 aa21.46■■□□□ 1.03
COPS7B-206ENST00000410017 FAM43AQ8N2R8 423 aa21.46■■□□□ 1.03
COPS7B-206ENST00000410017 ARHGEF5Q12774 1597 aa21.45■■□□□ 1.02
COPS7B-206ENST00000410017 ZNF521Q96K83 1311 aa21.45■■□□□ 1.02
COPS7B-206ENST00000410017 PLB1Q6P1J6 1458 aa21.45■■□□□ 1.02
COPS7B-206ENST00000410017 ERBINQ96RT1 1412 aa21.45■■□□□ 1.02
COPS7B-206ENST00000410017 CCDC144AA2RUR9 1427 aa21.44■■□□□ 1.02
COPS7B-206ENST00000410017 DISP3Q9P2K9 1392 aa21.44■■□□□ 1.02
COPS7B-206ENST00000410017 ADAMTS8Q9UP79 889 aa21.44■■□□□ 1.02
COPS7B-206ENST00000410017 FAM135AQ9P2D6 1515 aa21.43■■□□□ 1.02
COPS7B-206ENST00000410017 NBPF1Q3BBV0 1214 aa21.43■■□□□ 1.02
COPS7B-206ENST00000410017 EIF3AQ14152 1382 aaKnown RBP21.43■■□□□ 1.02
COPS7B-206ENST00000410017 TMF1P82094 1093 aa21.43■■□□□ 1.02
COPS7B-206ENST00000410017 FRAT2O75474 233 aaPredicted RBP21.42■■□□□ 1.02
COPS7B-206ENST00000410017 RSPH6AQ9H0K4 717 aa21.41■■□□□ 1.02
COPS7B-206ENST00000410017 GOLGA2Q08379 1002 aa21.41■■□□□ 1.02
COPS7B-206ENST00000410017 EIF2AK4Q9P2K8 1649 aaKnown RBP21.41■■□□□ 1.02
COPS7B-206ENST00000410017 PLEKHD1A6NEE1 506 aa21.4■■□□□ 1.02
COPS7B-206ENST00000410017 PLEKHH1Q9ULM0 1364 aa21.4■■□□□ 1.02
COPS7B-206ENST00000410017 A2MP01023 1474 aa21.38■■□□□ 1.01
COPS7B-206ENST00000410017 TRMT2AQ8IZ69 625 aaKnown RBP21.38■■□□□ 1.01
COPS7B-206ENST00000410017 SLFN5Q08AF3 891 aa21.37■■□□□ 1.01
COPS7B-206ENST00000410017 RSPH4AQ5TD94 716 aa21.36■■□□□ 1.01
COPS7B-206ENST00000410017 JPH4Q96JJ6 628 aa21.36■■□□□ 1.01
COPS7B-206ENST00000410017 ERCC6L2Q5T890 1561 aa21.36■■□□□ 1.01
COPS7B-206ENST00000410017 CCDC141Q6ZP82 1450 aa21.36■■□□□ 1.01
COPS7B-206ENST00000410017 WDR43Q15061 677 aaKnown RBP eCLIP21.36■■□□□ 1.01
COPS7B-206ENST00000410017 RIMBP3CA6NJZ7 1639 aa21.35■■□□□ 1.01
COPS7B-206ENST00000410017 RIMBP3BA6NNM3 1639 aa21.35■■□□□ 1.01
COPS7B-206ENST00000410017 RIMBP3Q9UFD9 1639 aa21.35■■□□□ 1.01
COPS7B-206ENST00000410017 CARMIL2Q6F5E8 1435 aa21.35■■□□□ 1.01
COPS7B-206ENST00000410017 PLA2R1Q13018 1463 aa21.35■■□□□ 1.01
COPS7B-206ENST00000410017 PPP2R1AP30153 589 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms