RNA–Protein interactions for RNA: ENST00000409683.5

PTMA-204, Transcript of prothymosin alpha, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene PTMA, Length 933 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-204ENST00000409683 KCNH8Q96L42 1107 aa16.4■□□□□ 0.22
PTMA-204ENST00000409683 SGIP1Q9BQI5 828 aa16.38■□□□□ 0.21
PTMA-204ENST00000409683 PCGF6Q9BYE7 350 aa16.38■□□□□ 0.21
PTMA-204ENST00000409683 PCDHB8Q9UN66 801 aa16.38■□□□□ 0.21
PTMA-204ENST00000409683 ITSN2Q9NZM3 1697 aa16.37■□□□□ 0.21
PTMA-204ENST00000409683 CDC42BPBQ9Y5S2 1711 aa16.37■□□□□ 0.21
PTMA-204ENST00000409683 CFDP1Q9UEE9 299 aaPredicted RBP16.37■□□□□ 0.21
PTMA-204ENST00000409683 PREX2Q70Z35 1606 aa16.37■□□□□ 0.21
PTMA-204ENST00000409683 PTPN23Q9H3S7 1636 aa16.37■□□□□ 0.21
PTMA-204ENST00000409683 BMP2KQ9NSY1 1161 aaPredicted RBP16.34■□□□□ 0.21
PTMA-204ENST00000409683 ZNF644Q9H582 1327 aaPredicted RBP16.34■□□□□ 0.21
PTMA-204ENST00000409683 KIAA1107Q9UPP5 1409 aa16.34■□□□□ 0.21
PTMA-204ENST00000409683 ATMINO43313 823 aaPredicted RBP16.33■□□□□ 0.2
PTMA-204ENST00000409683 PELP1Q8IZL8 1130 aaKnown RBP16.33■□□□□ 0.2
PTMA-204ENST00000409683 MBD5Q9P267 1494 aa16.33■□□□□ 0.2
PTMA-204ENST00000409683 CHRM1P11229 460 aaPredicted RBP16.32■□□□□ 0.2
PTMA-204ENST00000409683 PTPRKQ15262 1439 aa16.32■□□□□ 0.2
PTMA-204ENST00000409683 MYO5CQ9NQX4 1742 aa16.32■□□□□ 0.2
PTMA-204ENST00000409683 DIP2BQ9P265 1576 aa16.31■□□□□ 0.2
PTMA-204ENST00000409683 CAMSAP2Q08AD1 1489 aa16.31■□□□□ 0.2
PTMA-204ENST00000409683 EFCAB2Q5VUJ9 269 aa16.31■□□□□ 0.2
PTMA-204ENST00000409683 ASTLQ6HA08 431 aaPredicted RBP16.31■□□□□ 0.2
PTMA-204ENST00000409683 CD109Q6YHK3 1445 aa16.3■□□□□ 0.2
PTMA-204ENST00000409683 ATN1P54259 1190 aaPredicted RBP16.3■□□□□ 0.2
PTMA-204ENST00000409683 MAP3K4Q9Y6R4 1608 aa16.3■□□□□ 0.2
PTMA-204ENST00000409683 SAMD9LQ8IVG5 1584 aa16.3■□□□□ 0.2
PTMA-204ENST00000409683 ABCC5O15440 1437 aa16.29■□□□□ 0.2
PTMA-204ENST00000409683 RSPH4AQ5TD94 716 aa16.29■□□□□ 0.2
PTMA-204ENST00000409683 PLEKHH2Q8IVE3 1493 aa16.29■□□□□ 0.2
PTMA-204ENST00000409683 TIE1P35590 1138 aa16.28■□□□□ 0.2
PTMA-204ENST00000409683 FAM50AQ14320 339 aaKnown RBP16.28■□□□□ 0.2
PTMA-204ENST00000409683 ARHGEF5Q12774 1597 aa16.28■□□□□ 0.2
PTMA-204ENST00000409683 ARHGAP5Q13017 1502 aa16.27■□□□□ 0.2
PTMA-204ENST00000409683 ARHGEF12Q9NZN5 1544 aa16.26■□□□□ 0.19
PTMA-204ENST00000409683 TTLL13PA6NNM8 815 aa16.26■□□□□ 0.19
PTMA-204ENST00000409683 DAPK1P53355 1430 aa16.26■□□□□ 0.19
PTMA-204ENST00000409683 DNMT1P26358 1616 aaKnown RBP16.26■□□□□ 0.19
PTMA-204ENST00000409683 FANCAO15360 1455 aa16.25■□□□□ 0.19
PTMA-204ENST00000409683 FAM69CQ0P6D2 419 aa16.25■□□□□ 0.19
PTMA-204ENST00000409683 NEO1Q92859 1461 aa16.24■□□□□ 0.19
PTMA-204ENST00000409683 ZNF467Q7Z7K2 595 aaPredicted RBP16.24■□□□□ 0.19
PTMA-204ENST00000409683 AKNAQ7Z591 1439 aa16.24■□□□□ 0.19
PTMA-204ENST00000409683 ROCK1Q13464 1354 aa16.24■□□□□ 0.19
PTMA-204ENST00000409683 ABCC1P33527 1531 aa16.24■□□□□ 0.19
PTMA-204ENST00000409683 TMEM106CQ9BVX2 250 aa16.23■□□□□ 0.19
PTMA-204ENST00000409683 KIF13AQ9H1H9 1805 aa16.23■□□□□ 0.19
PTMA-204ENST00000409683 SHANK2Q9UPX8 1470 aa16.22■□□□□ 0.19
PTMA-204ENST00000409683 HRCP23327 699 aa16.22■□□□□ 0.19
PTMA-204ENST00000409683 ZNF777Q9ULD5 760 aaPredicted RBP16.22■□□□□ 0.19
PTMA-204ENST00000409683 HNRNPMP52272 730 aaKnown RBP eCLIP16.21■□□□□ 0.199e-8■■■■■ 73
PTMA-204ENST00000409683 ADGRL2O95490 1459 aa16.21■□□□□ 0.19
PTMA-204ENST00000409683 PPRC1Q5VV67 1664 aaKnown RBP16.21■□□□□ 0.18
PTMA-204ENST00000409683 HFM1A2PYH4 1435 aa16.19■□□□□ 0.18
PTMA-204ENST00000409683 CCDC141Q6ZP82 1450 aa16.19■□□□□ 0.18
PTMA-204ENST00000409683 SYCP2Q9BX26 1530 aa16.19■□□□□ 0.18
PTMA-204ENST00000409683 NCOA1Q15788 1441 aa16.19■□□□□ 0.18
PTMA-204ENST00000409683 TRAPPC8Q9Y2L5 1435 aa16.19■□□□□ 0.18
PTMA-204ENST00000409683 CFAP74Q9C0B2 1584 aa16.18■□□□□ 0.18
PTMA-204ENST00000409683 MAST1Q9Y2H9 1570 aa16.18■□□□□ 0.18
PTMA-204ENST00000409683 PKD2Q13563 968 aa16.18■□□□□ 0.18
PTMA-204ENST00000409683 TRIM35Q9UPQ4 493 aa16.17■□□□□ 0.18
PTMA-204ENST00000409683 NAIPQ13075 1403 aa16.17■□□□□ 0.18
PTMA-204ENST00000409683 CROCC2H7BZ55 1655 aa16.17■□□□□ 0.18
PTMA-204ENST00000409683 ADGRL1O94910 1474 aa16.16■□□□□ 0.18
PTMA-204ENST00000409683 RNF25Q96BH1 459 aaPredicted RBP16.16■□□□□ 0.18
PTMA-204ENST00000409683 RTEL1-TNFRSF6BF6WH68 1400 aa16.16■□□□□ 0.18
PTMA-204ENST00000409683 SCAPERQ9BY12 1400 aa16.16■□□□□ 0.18
PTMA-204ENST00000409683 ECM2O94769 699 aaPredicted RBP16.15■□□□□ 0.18
PTMA-204ENST00000409683 C9orf84Q5VXU9 1444 aa16.14■□□□□ 0.17
PTMA-204ENST00000409683 SETD5Q9C0A6 1442 aa16.14■□□□□ 0.17
PTMA-204ENST00000409683 ITGAEP38570 1179 aa16.14■□□□□ 0.17
PTMA-204ENST00000409683 METRNQ9UJH8 293 aa16.14■□□□□ 0.17
PTMA-204ENST00000409683 TEX14Q8IWB6 1497 aa16.14■□□□□ 0.17
PTMA-204ENST00000409683 TSPY4P0CV99 314 aa16.13■□□□□ 0.17
PTMA-204ENST00000409683 TSPY10P0CW01 314 aa16.13■□□□□ 0.17
PTMA-204ENST00000409683 PSEN1P49768 467 aa16.13■□□□□ 0.17
PTMA-204ENST00000409683 POGZQ7Z3K3 1410 aa16.12■□□□□ 0.17
PTMA-204ENST00000409683 AFAP1Q8N556 730 aa16.12■□□□□ 0.17
PTMA-204ENST00000409683 SLC39A7Q92504 469 aa16.12■□□□□ 0.17
PTMA-204ENST00000409683 KDM5CP41229 1560 aa16.12■□□□□ 0.17
PTMA-204ENST00000409683 ANKRD30AQ9BXX3 1397 aa16.11■□□□□ 0.17
PTMA-204ENST00000409683 ZNF518AQ6AHZ1 1483 aa16.1■□□□□ 0.17
PTMA-204ENST00000409683 CHIC2Q9UKJ5 165 aa16.1■□□□□ 0.17
PTMA-204ENST00000409683 MLH3Q9UHC1 1453 aa16.1■□□□□ 0.17
PTMA-204ENST00000409683 PDAP1Q13442 181 aaKnown RBP16.09■□□□□ 0.17
PTMA-204ENST00000409683 RAB3GAP2Q9H2M9 1393 aa16.09■□□□□ 0.17
PTMA-204ENST00000409683 DENND4BO75064 1496 aaPredicted RBP16.09■□□□□ 0.17
PTMA-204ENST00000409683 ADGBQ8N7X0 1667 aa16.08■□□□□ 0.17
PTMA-204ENST00000409683 PLXNC1O60486 1568 aa16.08■□□□□ 0.16
PTMA-204ENST00000409683 GCC2Q8IWJ2 1684 aa16.08■□□□□ 0.16
PTMA-204ENST00000409683 RIOK3O14730 519 aaKnown RBP16.07■□□□□ 0.16
PTMA-204ENST00000409683 C7P10643 843 aa16.07■□□□□ 0.16
PTMA-204ENST00000409683 LHX8Q68G74 356 aa16.07■□□□□ 0.16
PTMA-204ENST00000409683 RRP7BPQ9NSQ0 103 aa16.07■□□□□ 0.16
PTMA-204ENST00000409683 ACIN1Q9UKV3 1341 aaKnown RBP16.07■□□□□ 0.16
PTMA-204ENST00000409683 COL17A1Q9UMD9 1497 aaPredicted RBP16.07■□□□□ 0.16
PTMA-204ENST00000409683 INO80Q9ULG1 1556 aaPredicted RBP16.07■□□□□ 0.16
PTMA-204ENST00000409683 RICTORQ6R327 1708 aa16.06■□□□□ 0.16
PTMA-204ENST00000409683 ZFYVE16Q7Z3T8 1539 aa16.06■□□□□ 0.16
PTMA-204ENST00000409683 SPAG9O60271 1321 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms