RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 ERBINQ96RT1 1412 aa31.79■■■□□ 2.68
C4orf48-201ENST00000409248 KDM5DQ9BY66 1539 aa31.76■■■□□ 2.68
C4orf48-201ENST00000409248 NCOA1Q15788 1441 aa31.75■■■□□ 2.67
C4orf48-201ENST00000409248 RRP7BPQ9NSQ0 103 aa31.74■■■□□ 2.67
C4orf48-201ENST00000409248 CHIC2Q9UKJ5 165 aa31.74■■■□□ 2.67
C4orf48-201ENST00000409248 RRBP1Q9P2E9 1410 aaKnown RBP31.74■■■□□ 2.67
C4orf48-201ENST00000409248 PREX1Q8TCU6 1659 aa31.73■■■□□ 2.67
C4orf48-201ENST00000409248 ZC3H13Q5T200 1668 aaKnown RBP31.71■■■□□ 2.67
C4orf48-201ENST00000409248 CEBPAP49715 358 aaPredicted RBP31.71■■■□□ 2.67
C4orf48-201ENST00000409248 ZMYM3Q14202 1370 aa31.68■■■□□ 2.66
C4orf48-201ENST00000409248 LMTK3Q96Q04 1460 aa31.68■■■□□ 2.66
C4orf48-201ENST00000409248 MROH1Q8NDA8 1641 aa31.67■■■□□ 2.66
C4orf48-201ENST00000409248 PRDM15P57071 1507 aaPredicted RBP31.66■■■□□ 2.66
C4orf48-201ENST00000409248 SETD1BQ9UPS6 1966 aaKnown RBP31.66■■■□□ 2.66
C4orf48-201ENST00000409248 NPATQ14207 1427 aa31.66■■■□□ 2.66
C4orf48-201ENST00000409248 DEPDC5O75140 1603 aa31.65■■■□□ 2.66
C4orf48-201ENST00000409248 ROCK1Q13464 1354 aa31.65■■■□□ 2.66
C4orf48-201ENST00000409248 PTPRKQ15262 1439 aa31.65■■■□□ 2.66
C4orf48-201ENST00000409248 WASHC2CQ9Y4E1 1318 aa31.63■■■□□ 2.65
C4orf48-201ENST00000409248 ABCC3O15438 1527 aa31.62■■■□□ 2.65
C4orf48-201ENST00000409248 UHRF1BP1Q6BDS2 1440 aa31.61■■■□□ 2.65
C4orf48-201ENST00000409248 ANKRD50Q9ULJ7 1429 aa31.58■■■□□ 2.65
C4orf48-201ENST00000409248 CEP152O94986 1710 aa31.58■■■□□ 2.65
C4orf48-201ENST00000409248 ITGAEP38570 1179 aa31.58■■■□□ 2.65
C4orf48-201ENST00000409248 PZPP20742 1482 aa31.58■■■□□ 2.65
C4orf48-201ENST00000409248 CAMSAP1Q5T5Y3 1602 aa31.55■■■□□ 2.64
C4orf48-201ENST00000409248 KANK1Q14678 1352 aa31.54■■■□□ 2.64
C4orf48-201ENST00000409248 MYO3AQ8NEV4 1616 aa31.53■■■□□ 2.64
C4orf48-201ENST00000409248 ZNF142P52746 1687 aaPredicted RBP31.48■■■□□ 2.63
C4orf48-201ENST00000409248 VWDEQ8N2E2 1590 aa31.48■■■□□ 2.63
C4orf48-201ENST00000409248 UNC13BO14795 1591 aa31.47■■■□□ 2.63
C4orf48-201ENST00000409248 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.46■■■□□ 2.63
C4orf48-201ENST00000409248 LMTK2Q8IWU2 1503 aa31.45■■■□□ 2.63
C4orf48-201ENST00000409248 HSPA2P54652 639 aa31.43■■■□□ 2.62
C4orf48-201ENST00000409248 GCC2Q8IWJ2 1684 aa31.43■■■□□ 2.62
C4orf48-201ENST00000409248 CEP170BQ9Y4F5 1589 aaPredicted RBP31.43■■■□□ 2.62
C4orf48-201ENST00000409248 TNRQ92752 1358 aa31.43■■■□□ 2.62
C4orf48-201ENST00000409248 ARHGAP31Q2M1Z3 1444 aa31.41■■■□□ 2.62
C4orf48-201ENST00000409248 SPATA31D1Q6ZQQ2 1576 aa31.41■■■□□ 2.62
C4orf48-201ENST00000409248 ERVK-7P63135 1459 aa31.4■■■□□ 2.62
C4orf48-201ENST00000409248 EFCAB6Q5THR3 1501 aa31.39■■■□□ 2.61
C4orf48-201ENST00000409248 FBXO31Q5XUX0 539 aaPredicted RBP31.37■■■□□ 2.61
C4orf48-201ENST00000409248 A2ML1A8K2U0 1454 aa31.36■■■□□ 2.61
C4orf48-201ENST00000409248 TET3O43151 1660 aa31.35■■■□□ 2.61
C4orf48-201ENST00000409248 NLRP1Q9C000 1473 aa31.35■■■□□ 2.61
C4orf48-201ENST00000409248 IQGAP3Q86VI3 1631 aa31.33■■■□□ 2.61
C4orf48-201ENST00000409248 HFM1A2PYH4 1435 aa31.32■■■□□ 2.61
C4orf48-201ENST00000409248 NAIPQ13075 1403 aa31.32■■■□□ 2.61
C4orf48-201ENST00000409248 CFAP65Q6ZU64 1925 aaKnown RBP31.31■■■□□ 2.6
C4orf48-201ENST00000409248 RPRD2Q5VT52 1461 aaKnown RBP31.28■■■□□ 2.6
C4orf48-201ENST00000409248 STRCQ7RTU9 1775 aa31.27■■■□□ 2.6
C4orf48-201ENST00000409248 PLA2R1Q13018 1463 aa31.26■■■□□ 2.59
C4orf48-201ENST00000409248 NUP155O75694 1391 aa31.23■■■□□ 2.59
C4orf48-201ENST00000409248 UGGT1Q9NYU2 1555 aa31.22■■■□□ 2.59
C4orf48-201ENST00000409248 E9PCH4 1651 aa31.19■■■□□ 2.58
C4orf48-201ENST00000409248 SYNMO15061 1565 aa31.17■■■□□ 2.58
C4orf48-201ENST00000409248 NOS1P29475 1434 aa31.17■■■□□ 2.58
C4orf48-201ENST00000409248 DMRT2Q9Y5R5 561 aa31.17■■■□□ 2.58
C4orf48-201ENST00000409248 UBR1Q8IWV7 1749 aa31.15■■■□□ 2.58
C4orf48-201ENST00000409248 POLR1AO95602 1720 aaPredicted RBP31.15■■■□□ 2.58
C4orf48-201ENST00000409248 TRIM26Q12899 539 aaPredicted RBP31.13■■■□□ 2.57
C4orf48-201ENST00000409248 PIK3C2BO00750 1634 aa31.13■■■□□ 2.57
C4orf48-201ENST00000409248 KDM5AP29375 1690 aaKnown RBP31.13■■■□□ 2.57
C4orf48-201ENST00000409248 THEMISQ8N1K5 641 aaPredicted RBP31.12■■■□□ 2.57
C4orf48-201ENST00000409248 PTPRTO14522 1441 aa31.12■■■□□ 2.57
C4orf48-201ENST00000409248 PKD2Q13563 968 aa31.11■■■□□ 2.57
C4orf48-201ENST00000409248 ADGRB3O60242 1522 aa31.05■■■□□ 2.56
C4orf48-201ENST00000409248 SLC52A1Q9NWF4 448 aa31.05■■■□□ 2.56
C4orf48-201ENST00000409248 NCKAP5LQ9HCH0 1330 aa31.04■■■□□ 2.56
C4orf48-201ENST00000409248 SPHKAPQ2M3C7 1700 aa31.04■■■□□ 2.56
C4orf48-201ENST00000409248 TRIM52Q96A61 297 aa31.03■■■□□ 2.56
C4orf48-201ENST00000409248 NEURL4Q96JN8 1562 aa31.02■■■□□ 2.56
C4orf48-201ENST00000409248 STAG3Q9UJ98 1225 aa31.01■■■□□ 2.55
C4orf48-201ENST00000409248 SETD5Q9C0A6 1442 aa31■■■□□ 2.55
C4orf48-201ENST00000409248 SLIT1O75093 1534 aa31■■■□□ 2.55
C4orf48-201ENST00000409248 IDI1Q13907 227 aa31■■■□□ 2.55
C4orf48-201ENST00000409248 ANKLE2Q86XL3 938 aa31■■■□□ 2.55
C4orf48-201ENST00000409248 ACIN1Q9UKV3 1341 aaKnown RBP30.99■■■□□ 2.55
C4orf48-201ENST00000409248 ARHGAP23Q9P227 1491 aa30.98■■■□□ 2.55
C4orf48-201ENST00000409248 MED14O60244 1454 aa30.95■■■□□ 2.54
C4orf48-201ENST00000409248 SCAF11Q99590 1463 aaKnown RBP30.95■■■□□ 2.54
C4orf48-201ENST00000409248 IQGAP1P46940 1657 aa30.93■■■□□ 2.54
C4orf48-201ENST00000409248 TMEM2Q9UHN6 1383 aa30.92■■■□□ 2.54
C4orf48-201ENST00000409248 TMEM131LA2VDJ0 1609 aa30.92■■■□□ 2.54
C4orf48-201ENST00000409248 SLC4A1APQ9BWU0 796 aaKnown RBP30.92■■■□□ 2.54
C4orf48-201ENST00000409248 TRPM2O94759 1503 aa30.92■■■□□ 2.54
C4orf48-201ENST00000409248 NPHP4O75161 1426 aaPredicted RBP30.91■■■□□ 2.54
C4orf48-201ENST00000409248 MYO5BQ9ULV0 1848 aa30.91■■■□□ 2.54
C4orf48-201ENST00000409248 EID1Q9Y6B2 187 aa30.88■■■□□ 2.53
C4orf48-201ENST00000409248 RAB3GAP2Q9H2M9 1393 aa30.88■■■□□ 2.53
C4orf48-201ENST00000409248 TXNDC2Q86VQ3 553 aa30.84■■■□□ 2.53
C4orf48-201ENST00000409248 CLTCL1P53675 1640 aa30.84■■■□□ 2.53
C4orf48-201ENST00000409248 CHGAP10645 457 aaKnown RBP30.81■■■□□ 2.52
C4orf48-201ENST00000409248 LTBP4Q8N2S1 1624 aa30.8■■■□□ 2.52
C4orf48-201ENST00000409248 LTKP29376 864 aa30.79■■■□□ 2.52
C4orf48-201ENST00000409248 ZFYVE9O95405 1425 aa30.79■■■□□ 2.52
C4orf48-201ENST00000409248 KIF1BO60333 1816 aa30.78■■■□□ 2.52
C4orf48-201ENST00000409248 PCGF6Q9BYE7 350 aa30.78■■■□□ 2.52
C4orf48-201ENST00000409248 MPHOSPH9Q99550 1183 aa30.77■■■□□ 2.52
C4orf48-201ENST00000409248 RIMS2Q9UQ26 1411 aa30.77■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms