RNA–Protein interactions for RNA: ENST00000409022.2

PTPN18-203, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-203ENST00000409022 DUOX2Q9NRD8 1548 aa28.61■■■□□ 2.17
PTPN18-203ENST00000409022 DAPK1P53355 1430 aa28.6■■■□□ 2.17
PTPN18-203ENST00000409022 KIF15Q9NS87 1388 aa28.6■■■□□ 2.17
PTPN18-203ENST00000409022 ILDR1Q86SU0 546 aaPredicted RBP28.58■■■□□ 2.17
PTPN18-203ENST00000409022 EIF2AK4Q9P2K8 1649 aaKnown RBP28.57■■■□□ 2.16
PTPN18-203ENST00000409022 FAM50AQ14320 339 aaKnown RBP28.56■■■□□ 2.16
PTPN18-203ENST00000409022 ANKRD30AQ9BXX3 1397 aa28.56■■■□□ 2.16
PTPN18-203ENST00000409022 RRP7BPQ9NSQ0 103 aa28.56■■■□□ 2.16
PTPN18-203ENST00000409022 DNMT1P26358 1616 aaKnown RBP28.55■■■□□ 2.16
PTPN18-203ENST00000409022 PZPP20742 1482 aa28.54■■■□□ 2.16
PTPN18-203ENST00000409022 ERBINQ96RT1 1412 aa28.54■■■□□ 2.16
PTPN18-203ENST00000409022 RNF17Q9BXT8 1623 aaKnown RBP28.52■■■□□ 2.16
PTPN18-203ENST00000409022 CROCC2H7BZ55 1655 aa28.51■■■□□ 2.16
PTPN18-203ENST00000409022 TNRQ92752 1358 aa28.51■■■□□ 2.16
PTPN18-203ENST00000409022 NCOA1Q15788 1441 aa28.51■■■□□ 2.15
PTPN18-203ENST00000409022 CHIC2Q9UKJ5 165 aa28.5■■■□□ 2.15
PTPN18-203ENST00000409022 PTPRTO14522 1441 aa28.5■■■□□ 2.15
PTPN18-203ENST00000409022 MYO3AQ8NEV4 1616 aa28.5■■■□□ 2.15
PTPN18-203ENST00000409022 FBXO31Q5XUX0 539 aaPredicted RBP28.48■■■□□ 2.15
PTPN18-203ENST00000409022 FBXO41Q8TF61 875 aa28.48■■■□□ 2.15
PTPN18-203ENST00000409022 CEP170BQ9Y4F5 1589 aaPredicted RBP28.48■■■□□ 2.15
PTPN18-203ENST00000409022 CAMSAP1Q5T5Y3 1602 aa28.47■■■□□ 2.15
PTPN18-203ENST00000409022 ZC3H13Q5T200 1668 aaKnown RBP28.46■■■□□ 2.15
PTPN18-203ENST00000409022 PKD2Q13563 968 aa28.46■■■□□ 2.15
PTPN18-203ENST00000409022 ABCC3O15438 1527 aa28.46■■■□□ 2.15
PTPN18-203ENST00000409022 A2ML1A8K2U0 1454 aa28.46■■■□□ 2.15
PTPN18-203ENST00000409022 KANK1Q14678 1352 aa28.45■■■□□ 2.14
PTPN18-203ENST00000409022 PLA2R1Q13018 1463 aa28.45■■■□□ 2.14
PTPN18-203ENST00000409022 ZNF142P52746 1687 aaPredicted RBP28.45■■■□□ 2.14
PTPN18-203ENST00000409022 STRCQ7RTU9 1775 aa28.45■■■□□ 2.14
PTPN18-203ENST00000409022 CERKQ8TCT0 537 aa28.41■■■□□ 2.14
PTPN18-203ENST00000409022 ADGRL2O95490 1459 aa28.4■■■□□ 2.14
PTPN18-203ENST00000409022 NLRP1Q9C000 1473 aa28.4■■■□□ 2.14
PTPN18-203ENST00000409022 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.4■■■□□ 2.142e-8■■■□□ 14.6
PTPN18-203ENST00000409022 THEMISQ8N1K5 641 aaPredicted RBP28.38■■■□□ 2.13
PTPN18-203ENST00000409022 MROH1Q8NDA8 1641 aa28.38■■■□□ 2.13
PTPN18-203ENST00000409022 NCKAP5LQ9HCH0 1330 aa28.38■■■□□ 2.13
PTPN18-203ENST00000409022 PRDM15P57071 1507 aaPredicted RBP28.38■■■□□ 2.13
PTPN18-203ENST00000409022 ARHGAP31Q2M1Z3 1444 aa28.34■■■□□ 2.13
PTPN18-203ENST00000409022 ERVK-7P63135 1459 aa28.33■■■□□ 2.13
PTPN18-203ENST00000409022 SPATA31D1Q6ZQQ2 1576 aa28.32■■■□□ 2.12
PTPN18-203ENST00000409022 PPARGC1BQ86YN6 1023 aaKnown RBP28.31■■■□□ 2.12
PTPN18-203ENST00000409022 ANKRD50Q9ULJ7 1429 aa28.31■■■□□ 2.12
PTPN18-203ENST00000409022 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.3■■■□□ 2.126e-6■□□□□ 11
PTPN18-203ENST00000409022 DEPDC5O75140 1603 aa28.29■■■□□ 2.12
PTPN18-203ENST00000409022 ANKLE2Q86XL3 938 aa28.29■■■□□ 2.12
PTPN18-203ENST00000409022 UGGT1Q9NYU2 1555 aa28.28■■■□□ 2.12
PTPN18-203ENST00000409022 ROCK1Q13464 1354 aa28.27■■■□□ 2.12
PTPN18-203ENST00000409022 CEP152O94986 1710 aa28.26■■■□□ 2.12
PTPN18-203ENST00000409022 LMTK2Q8IWU2 1503 aa28.25■■■□□ 2.11
PTPN18-203ENST00000409022 ITGAEP38570 1179 aa28.22■■■□□ 2.11
PTPN18-203ENST00000409022 VWDEQ8N2E2 1590 aa28.2■■■□□ 2.1
PTPN18-203ENST00000409022 STAG3Q9UJ98 1225 aa28.17■■■□□ 2.1
PTPN18-203ENST00000409022 ZNF335Q9H4Z2 1342 aaPredicted RBP28.16■■■□□ 2.1
PTPN18-203ENST00000409022 LTBP4Q8N2S1 1624 aa28.15■■■□□ 2.1
PTPN18-203ENST00000409022 IQSEC2Q5JU85 1478 aa28.15■■■□□ 2.1
PTPN18-203ENST00000409022 EFCAB6Q5THR3 1501 aa28.13■■■□□ 2.09
PTPN18-203ENST00000409022 NPHP4O75161 1426 aaPredicted RBP28.12■■■□□ 2.09
PTPN18-203ENST00000409022 POLR1AO95602 1720 aaPredicted RBP28.12■■■□□ 2.09
PTPN18-203ENST00000409022 RRBP1Q9P2E9 1410 aaKnown RBP28.11■■■□□ 2.09
PTPN18-203ENST00000409022 MED14O60244 1454 aa28.11■■■□□ 2.09
PTPN18-203ENST00000409022 RPRD2Q5VT52 1461 aaKnown RBP28.11■■■□□ 2.09
PTPN18-203ENST00000409022 SLC52A1Q9NWF4 448 aa28.11■■■□□ 2.09
PTPN18-203ENST00000409022 EID1Q9Y6B2 187 aa28.11■■■□□ 2.09
PTPN18-203ENST00000409022 NEURL4Q96JN8 1562 aa28.09■■■□□ 2.09
PTPN18-203ENST00000409022 NOS1P29475 1434 aa28.08■■■□□ 2.09
PTPN18-203ENST00000409022 CFAP65Q6ZU64 1925 aaKnown RBP28.06■■■□□ 2.08
PTPN18-203ENST00000409022 IDI1Q13907 227 aa28.06■■■□□ 2.08
PTPN18-203ENST00000409022 UNC13BO14795 1591 aa28.05■■■□□ 2.08
PTPN18-203ENST00000409022 TXNDC2Q86VQ3 553 aa28.05■■■□□ 2.08
PTPN18-203ENST00000409022 UBR1Q8IWV7 1749 aa28.04■■■□□ 2.08
PTPN18-203ENST00000409022 SCAF11Q99590 1463 aaKnown RBP28.04■■■□□ 2.08
PTPN18-203ENST00000409022 NUP155O75694 1391 aa28.03■■■□□ 2.08
PTPN18-203ENST00000409022 SLIT1O75093 1534 aa28.02■■■□□ 2.08
PTPN18-203ENST00000409022 TET3O43151 1660 aa28.02■■■□□ 2.08
PTPN18-203ENST00000409022 ARHGAP23Q9P227 1491 aa28.02■■■□□ 2.08
PTPN18-203ENST00000409022 TMEM2Q9UHN6 1383 aa28.01■■■□□ 2.07
PTPN18-203ENST00000409022 CPS1P31327 1500 aa28.01■■■□□ 2.07
PTPN18-203ENST00000409022 PIK3C2BO00750 1634 aa28■■■□□ 2.07
PTPN18-203ENST00000409022 IQGAP1P46940 1657 aa27.99■■■□□ 2.07
PTPN18-203ENST00000409022 SYNMO15061 1565 aa27.98■■■□□ 2.07
PTPN18-203ENST00000409022 KDM5AP29375 1690 aaKnown RBP27.97■■■□□ 2.07
PTPN18-203ENST00000409022 LTKP29376 864 aa27.97■■■□□ 2.07
PTPN18-203ENST00000409022 HDGFP51858 240 aaKnown RBP27.95■■■□□ 2.06
PTPN18-203ENST00000409022 GCC2Q8IWJ2 1684 aa27.94■■■□□ 2.06
PTPN18-203ENST00000409022 IQGAP3Q86VI3 1631 aa27.94■■■□□ 2.06
PTPN18-203ENST00000409022 UBAP1LF5GYI3 381 aa27.94■■■□□ 2.06
PTPN18-203ENST00000409022 ADGRB3O60242 1522 aa27.93■■■□□ 2.06
PTPN18-203ENST00000409022 NAIPQ13075 1403 aa27.88■■■□□ 2.05
PTPN18-203ENST00000409022 TOM1O60784 492 aa27.87■■■□□ 2.05
PTPN18-203ENST00000409022 CHGAP10645 457 aaKnown RBP27.87■■■□□ 2.05
PTPN18-203ENST00000409022 BCANQ96GW7 911 aa27.86■■■□□ 2.05
PTPN18-203ENST00000409022 PPP1R15AO75807 674 aaPredicted RBP27.85■■■□□ 2.05
PTPN18-203ENST00000409022 HFM1A2PYH4 1435 aa27.84■■■□□ 2.05
PTPN18-203ENST00000409022 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.84■■■□□ 2.05
PTPN18-203ENST00000409022 E9PCH4 1651 aa27.84■■■□□ 2.05
PTPN18-203ENST00000409022 TRIM52Q96A61 297 aa27.8■■■□□ 2.04
PTPN18-203ENST00000409022 RIMS2Q9UQ26 1411 aa27.79■■■□□ 2.04
PTPN18-203ENST00000409022 PLEKHG1Q9ULL1 1385 aa27.76■■■□□ 2.03
PTPN18-203ENST00000409022 SCAF1Q9H7N4 1312 aaKnown RBP27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms