RNA–Protein interactions for RNA: ENST00000403276.7

CSNK1D-205, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-205ENST00000403276 PPARGC1BQ86YN6 1023 aaKnown RBP26.05■■□□□ 1.76
CSNK1D-205ENST00000403276 WASHC2CQ9Y4E1 1318 aa26.05■■□□□ 1.76
CSNK1D-205ENST00000403276 RRP7BPQ9NSQ0 103 aa26.04■■□□□ 1.76
CSNK1D-205ENST00000403276 CHIC2Q9UKJ5 165 aa26.04■■□□□ 1.76
CSNK1D-205ENST00000403276 SHANK2Q9UPX8 1470 aa26.04■■□□□ 1.76
CSNK1D-205ENST00000403276 KDM5DQ9BY66 1539 aa26.04■■□□□ 1.76
CSNK1D-205ENST00000403276 FAM50AQ14320 339 aaKnown RBP26.03■■□□□ 1.76
CSNK1D-205ENST00000403276 DUOX2Q9NRD8 1548 aa26.02■■□□□ 1.76
CSNK1D-205ENST00000403276 RNF17Q9BXT8 1623 aaKnown RBP26.02■■□□□ 1.76
CSNK1D-205ENST00000403276 EIF2AK4Q9P2K8 1649 aaKnown RBP26.02■■□□□ 1.76
CSNK1D-205ENST00000403276 KIF15Q9NS87 1388 aa26.01■■□□□ 1.75
CSNK1D-205ENST00000403276 FBXO31Q5XUX0 539 aaPredicted RBP26■■□□□ 1.75
CSNK1D-205ENST00000403276 MYO3AQ8NEV4 1616 aa25.99■■□□□ 1.75
CSNK1D-205ENST00000403276 FAM135AQ9P2D6 1515 aa25.97■■□□□ 1.75
CSNK1D-205ENST00000403276 CFAP65Q6ZU64 1925 aaKnown RBP25.96■■□□□ 1.75
CSNK1D-205ENST00000403276 MROH1Q8NDA8 1641 aa25.96■■□□□ 1.75
CSNK1D-205ENST00000403276 CEP152O94986 1710 aa25.95■■□□□ 1.74
CSNK1D-205ENST00000403276 ZNF142P52746 1687 aaPredicted RBP25.95■■□□□ 1.74
CSNK1D-205ENST00000403276 PZPP20742 1482 aa25.94■■□□□ 1.74
CSNK1D-205ENST00000403276 CAMSAP1Q5T5Y3 1602 aa25.94■■□□□ 1.74
CSNK1D-205ENST00000403276 ABCC3O15438 1527 aa25.93■■□□□ 1.74
CSNK1D-205ENST00000403276 CEP170BQ9Y4F5 1589 aaPredicted RBP25.93■■□□□ 1.74
CSNK1D-205ENST00000403276 ANKRD30AQ9BXX3 1397 aa25.93■■□□□ 1.74
CSNK1D-205ENST00000403276 ERBINQ96RT1 1412 aa25.91■■□□□ 1.74
CSNK1D-205ENST00000403276 ZC3H13Q5T200 1668 aaKnown RBP25.91■■□□□ 1.74
CSNK1D-205ENST00000403276 DMRT2Q9Y5R5 561 aa25.91■■□□□ 1.74
CSNK1D-205ENST00000403276 TNRQ92752 1358 aa25.91■■□□□ 1.74
CSNK1D-205ENST00000403276 NCOA1Q15788 1441 aa25.9■■□□□ 1.74
CSNK1D-205ENST00000403276 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.89■■□□□ 1.745e-7■□□□□ 9.7
CSNK1D-205ENST00000403276 NCKAP5LQ9HCH0 1330 aa25.88■■□□□ 1.73
CSNK1D-205ENST00000403276 A2ML1A8K2U0 1454 aa25.86■■□□□ 1.73
CSNK1D-205ENST00000403276 ADGRL2O95490 1459 aa25.85■■□□□ 1.73
CSNK1D-205ENST00000403276 PRDM15P57071 1507 aaPredicted RBP25.84■■□□□ 1.73
CSNK1D-205ENST00000403276 PTPRTO14522 1441 aa25.84■■□□□ 1.73
CSNK1D-205ENST00000403276 DEPDC5O75140 1603 aa25.84■■□□□ 1.73
CSNK1D-205ENST00000403276 SPATA31D1Q6ZQQ2 1576 aa25.79■■□□□ 1.72
CSNK1D-205ENST00000403276 ITGAEP38570 1179 aa25.79■■□□□ 1.72
CSNK1D-205ENST00000403276 CERKQ8TCT0 537 aa25.79■■□□□ 1.72
CSNK1D-205ENST00000403276 FBXO41Q8TF61 875 aa25.79■■□□□ 1.72
CSNK1D-205ENST00000403276 PLA2R1Q13018 1463 aa25.79■■□□□ 1.72
CSNK1D-205ENST00000403276 KANK1Q14678 1352 aa25.78■■□□□ 1.72
CSNK1D-205ENST00000403276 ERVK-7P63135 1459 aa25.78■■□□□ 1.72
CSNK1D-205ENST00000403276 PKD2Q13563 968 aa25.77■■□□□ 1.72
CSNK1D-205ENST00000403276 NLRP1Q9C000 1473 aa25.76■■□□□ 1.71
CSNK1D-205ENST00000403276 ANKRD50Q9ULJ7 1429 aa25.75■■□□□ 1.71
CSNK1D-205ENST00000403276 UGGT1Q9NYU2 1555 aa25.73■■□□□ 1.71
CSNK1D-205ENST00000403276 VWDEQ8N2E2 1590 aa25.73■■□□□ 1.71
CSNK1D-205ENST00000403276 ARHGAP31Q2M1Z3 1444 aa25.72■■□□□ 1.71
CSNK1D-205ENST00000403276 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.72■■□□□ 1.712e-11■■■■■ 32.8
CSNK1D-205ENST00000403276 THEMISQ8N1K5 641 aaPredicted RBP25.72■■□□□ 1.71
CSNK1D-205ENST00000403276 POLR1AO95602 1720 aaPredicted RBP25.71■■□□□ 1.71
CSNK1D-205ENST00000403276 LMTK2Q8IWU2 1503 aa25.68■■□□□ 1.7
CSNK1D-205ENST00000403276 ROCK1Q13464 1354 aa25.68■■□□□ 1.7
CSNK1D-205ENST00000403276 LTBP4Q8N2S1 1624 aa25.66■■□□□ 1.7
CSNK1D-205ENST00000403276 UBR1Q8IWV7 1749 aa25.66■■□□□ 1.7
CSNK1D-205ENST00000403276 NEURL4Q96JN8 1562 aa25.65■■□□□ 1.7
CSNK1D-205ENST00000403276 ANKLE2Q86XL3 938 aa25.65■■□□□ 1.7
CSNK1D-205ENST00000403276 ZNF335Q9H4Z2 1342 aaPredicted RBP25.64■■□□□ 1.7
CSNK1D-205ENST00000403276 EFCAB6Q5THR3 1501 aa25.63■■□□□ 1.69
CSNK1D-205ENST00000403276 RRBP1Q9P2E9 1410 aaKnown RBP25.63■■□□□ 1.69
CSNK1D-205ENST00000403276 UNC13BO14795 1591 aa25.61■■□□□ 1.69
CSNK1D-205ENST00000403276 PIK3C2BO00750 1634 aa25.6■■□□□ 1.69
CSNK1D-205ENST00000403276 SYNMO15061 1565 aa25.58■■□□□ 1.69
CSNK1D-205ENST00000403276 TET3O43151 1660 aa25.58■■□□□ 1.68
CSNK1D-205ENST00000403276 IDI1Q13907 227 aa25.57■■□□□ 1.68
CSNK1D-205ENST00000403276 NPHP4O75161 1426 aaPredicted RBP25.55■■□□□ 1.68
CSNK1D-205ENST00000403276 NOS1P29475 1434 aa25.55■■□□□ 1.68
CSNK1D-205ENST00000403276 GCC2Q8IWJ2 1684 aa25.55■■□□□ 1.68
CSNK1D-205ENST00000403276 STAG3Q9UJ98 1225 aa25.54■■□□□ 1.68
CSNK1D-205ENST00000403276 MED14O60244 1454 aa25.53■■□□□ 1.68
CSNK1D-205ENST00000403276 IQGAP1P46940 1657 aa25.53■■□□□ 1.68
CSNK1D-205ENST00000403276 LTKP29376 864 aa25.52■■□□□ 1.68
CSNK1D-205ENST00000403276 NUP155O75694 1391 aa25.51■■□□□ 1.67
CSNK1D-205ENST00000403276 IQGAP3Q86VI3 1631 aa25.51■■□□□ 1.67
CSNK1D-205ENST00000403276 E9PCH4 1651 aa25.51■■□□□ 1.67
CSNK1D-205ENST00000403276 RPRD2Q5VT52 1461 aaKnown RBP25.5■■□□□ 1.67
CSNK1D-205ENST00000403276 TXNDC2Q86VQ3 553 aa25.5■■□□□ 1.67
CSNK1D-205ENST00000403276 SLIT1O75093 1534 aa25.49■■□□□ 1.67
CSNK1D-205ENST00000403276 ARHGAP23Q9P227 1491 aa25.49■■□□□ 1.67
CSNK1D-205ENST00000403276 SCAF11Q99590 1463 aaKnown RBP25.47■■□□□ 1.67
CSNK1D-205ENST00000403276 MYO5BQ9ULV0 1848 aa25.47■■□□□ 1.67
CSNK1D-205ENST00000403276 KDM5AP29375 1690 aaKnown RBP25.47■■□□□ 1.67
CSNK1D-205ENST00000403276 SLC52A1Q9NWF4 448 aa25.46■■□□□ 1.67
CSNK1D-205ENST00000403276 IQSEC2Q5JU85 1478 aa25.46■■□□□ 1.67
CSNK1D-205ENST00000403276 TMEM2Q9UHN6 1383 aa25.45■■□□□ 1.67
CSNK1D-205ENST00000403276 EID1Q9Y6B2 187 aa25.45■■□□□ 1.66
CSNK1D-205ENST00000403276 NAIPQ13075 1403 aa25.44■■□□□ 1.66
CSNK1D-205ENST00000403276 ADGRB3O60242 1522 aa25.43■■□□□ 1.66
CSNK1D-205ENST00000403276 STRCP1A6NGW2 1772 aa25.42■■□□□ 1.66
CSNK1D-205ENST00000403276 CPS1P31327 1500 aa25.39■■□□□ 1.66
CSNK1D-205ENST00000403276 UBAP1LF5GYI3 381 aa25.37■■□□□ 1.65
CSNK1D-205ENST00000403276 CHGAP10645 457 aaKnown RBP25.37■■□□□ 1.65
CSNK1D-205ENST00000403276 TMEM131LA2VDJ0 1609 aa25.37■■□□□ 1.65
CSNK1D-205ENST00000403276 SENP3Q9H4L4 574 aaPredicted RBP25.36■■□□□ 1.65
CSNK1D-205ENST00000403276 HFM1A2PYH4 1435 aa25.34■■□□□ 1.65
CSNK1D-205ENST00000403276 SPHKAPQ2M3C7 1700 aa25.32■■□□□ 1.64
CSNK1D-205ENST00000403276 TRIM52Q96A61 297 aa25.32■■□□□ 1.64
CSNK1D-205ENST00000403276 SLC26A8Q96RN1 970 aa25.31■■□□□ 1.64
CSNK1D-205ENST00000403276 RIMS2Q9UQ26 1411 aa25.29■■□□□ 1.64
CSNK1D-205ENST00000403276 BCANQ96GW7 911 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms