RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 USP47Q96K76 1375 aa21.95■■□□□ 1.1
CDC42-203ENST00000400259 CCDC144AA2RUR9 1427 aa21.94■■□□□ 1.1
CDC42-203ENST00000400259 DEPDC5O75140 1603 aa21.94■■□□□ 1.1
CDC42-203ENST00000400259 FANCAO15360 1455 aa21.94■■□□□ 1.1
CDC42-203ENST00000400259 ASXL2Q76L83 1435 aa21.92■■□□□ 1.1
CDC42-203ENST00000400259 KIF7Q2M1P5 1343 aa21.92■■□□□ 1.1
CDC42-203ENST00000400259 TRPM1Q7Z4N2 1603 aa21.92■■□□□ 1.1
CDC42-203ENST00000400259 OSCARQ8IYS5 282 aa21.9■■□□□ 1.1
CDC42-203ENST00000400259 ATP7AQ04656 1500 aa21.9■■□□□ 1.1
CDC42-203ENST00000400259 SPAG9O60271 1321 aaKnown RBP21.9■■□□□ 1.1
CDC42-203ENST00000400259 ARID4BQ4LE39 1312 aaPredicted RBP21.89■■□□□ 1.09
CDC42-203ENST00000400259 EIF2AK4Q9P2K8 1649 aaKnown RBP21.88■■□□□ 1.09
CDC42-203ENST00000400259 LAMC1P11047 1609 aa21.87■■□□□ 1.09
CDC42-203ENST00000400259 E9PCH4 1651 aa21.87■■□□□ 1.09
CDC42-203ENST00000400259 ZNF326Q5BKZ1 582 aaKnown RBP21.86■■□□□ 1.09
CDC42-203ENST00000400259 PRAG1Q86YV5 1406 aa21.85■■□□□ 1.09
CDC42-203ENST00000400259 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.85■■□□□ 1.099e-6■■■□□ 18.9
CDC42-203ENST00000400259 ADGRL1O94910 1474 aa21.85■■□□□ 1.09
CDC42-203ENST00000400259 A2MP01023 1474 aa21.84■■□□□ 1.09
CDC42-203ENST00000400259 TET3O43151 1660 aa21.84■■□□□ 1.09
CDC42-203ENST00000400259 VWDEQ8N2E2 1590 aa21.84■■□□□ 1.09
CDC42-203ENST00000400259 DCAF11Q8TEB1 546 aa21.83■■□□□ 1.09
CDC42-203ENST00000400259 CFAP74Q9C0B2 1584 aa21.83■■□□□ 1.09
CDC42-203ENST00000400259 AFAP1Q8N556 730 aa21.83■■□□□ 1.09
CDC42-203ENST00000400259 SPHKAPQ2M3C7 1700 aa21.82■■□□□ 1.08
CDC42-203ENST00000400259 CARD11Q9BXL7 1154 aa21.81■■□□□ 1.08
CDC42-203ENST00000400259 CEP152O94986 1710 aa21.81■■□□□ 1.08
CDC42-203ENST00000400259 TRPM2O94759 1503 aa21.8■■□□□ 1.08
CDC42-203ENST00000400259 PRKRIP1Q9H875 184 aaPredicted RBP21.8■■□□□ 1.08
CDC42-203ENST00000400259 SCAPERQ9BY12 1400 aa21.8■■□□□ 1.08
CDC42-203ENST00000400259 KIDINS220Q9ULH0 1771 aa21.79■■□□□ 1.08
CDC42-203ENST00000400259 GPRASP1Q5JY77 1395 aa21.79■■□□□ 1.08
CDC42-203ENST00000400259 KDM2AQ9Y2K7 1162 aa21.78■■□□□ 1.08
CDC42-203ENST00000400259 PRDM15P57071 1507 aaPredicted RBP21.78■■□□□ 1.08
CDC42-203ENST00000400259 ROCK2O75116 1388 aaKnown RBP21.78■■□□□ 1.08
CDC42-203ENST00000400259 SUPT16HQ9Y5B9 1047 aaKnown RBP21.77■■□□□ 1.08
CDC42-203ENST00000400259 MROH1Q8NDA8 1641 aa21.77■■□□□ 1.08
CDC42-203ENST00000400259 DHX29Q7Z478 1369 aaKnown RBP21.76■■□□□ 1.07
CDC42-203ENST00000400259 PTPRTO14522 1441 aa21.76■■□□□ 1.07
CDC42-203ENST00000400259 RNF17Q9BXT8 1623 aaKnown RBP21.75■■□□□ 1.07
CDC42-203ENST00000400259 NPM1P06748 294 aaKnown RBP eCLIP21.74■■□□□ 1.07
CDC42-203ENST00000400259 ZNF518AQ6AHZ1 1483 aa21.74■■□□□ 1.07
CDC42-203ENST00000400259 NEURL4Q96JN8 1562 aa21.73■■□□□ 1.07
CDC42-203ENST00000400259 CLTCL1P53675 1640 aa21.72■■□□□ 1.07
CDC42-203ENST00000400259 KANK1Q14678 1352 aa21.7■■□□□ 1.06
CDC42-203ENST00000400259 ST20-MTHFSA0A0A6YYL1 179 aa21.69■■□□□ 1.06
CDC42-203ENST00000400259 MADDQ8WXG6 1647 aa21.69■■□□□ 1.06
CDC42-203ENST00000400259 RGL3Q3MIN7 710 aa21.69■■□□□ 1.06
CDC42-203ENST00000400259 CD109Q6YHK3 1445 aa21.68■■□□□ 1.06
CDC42-203ENST00000400259 POGZQ7Z3K3 1410 aa21.67■■□□□ 1.06
CDC42-203ENST00000400259 LMTK2Q8IWU2 1503 aa21.66■■□□□ 1.06
CDC42-203ENST00000400259 CCDC184Q52MB2 194 aa21.66■■□□□ 1.06
CDC42-203ENST00000400259 EFCAB6Q5THR3 1501 aa21.65■■□□□ 1.06
CDC42-203ENST00000400259 HECW2Q9P2P5 1572 aa21.65■■□□□ 1.06
CDC42-203ENST00000400259 MLH3Q9UHC1 1453 aa21.65■■□□□ 1.06
CDC42-203ENST00000400259 STAC3Q96MF2 364 aa21.64■■□□□ 1.05
CDC42-203ENST00000400259 IQGAP1P46940 1657 aa21.63■■□□□ 1.05
CDC42-203ENST00000400259 KIAA1210Q9ULL0 1709 aa21.62■■□□□ 1.05
CDC42-203ENST00000400259 KIF3BO15066 747 aa21.62■■□□□ 1.05
CDC42-203ENST00000400259 HNRNPUQ00839 825 aaKnown RBP eCLIP21.62■■□□□ 1.05
CDC42-203ENST00000400259 NBPF1Q3BBV0 1214 aa21.62■■□□□ 1.05
CDC42-203ENST00000400259 MRS2Q9HD23 443 aa21.62■■□□□ 1.05
CDC42-203ENST00000400259 NEO1Q92859 1461 aa21.62■■□□□ 1.05
CDC42-203ENST00000400259 COL17A1Q9UMD9 1497 aaPredicted RBP21.62■■□□□ 1.05
CDC42-203ENST00000400259 PPRC1Q5VV67 1664 aaKnown RBP21.62■■□□□ 1.05
CDC42-203ENST00000400259 KIF1BO60333 1816 aa21.61■■□□□ 1.05
CDC42-203ENST00000400259 FRMPD1Q5SYB0 1578 aa21.6■■□□□ 1.05
CDC42-203ENST00000400259 KTN1Q86UP2 1357 aaKnown RBP21.59■■□□□ 1.05
CDC42-203ENST00000400259 IFT172Q9UG01 1749 aa21.58■■□□□ 1.05
CDC42-203ENST00000400259 POLR3GLQ9BT43 218 aa21.58■■□□□ 1.04
CDC42-203ENST00000400259 ABCA6Q8N139 1617 aa21.57■■□□□ 1.04
CDC42-203ENST00000400259 MAP3K4Q9Y6R4 1608 aa21.57■■□□□ 1.04
CDC42-203ENST00000400259 MYT1LQ9UL68 1186 aa21.57■■□□□ 1.04
CDC42-203ENST00000400259 TESK2Q96S53 571 aa21.54■■□□□ 1.04
CDC42-203ENST00000400259 RICTORQ6R327 1708 aa21.53■■□□□ 1.04
CDC42-203ENST00000400259 MYOM2P54296 1465 aa21.53■■□□□ 1.04
CDC42-203ENST00000400259 GLI2P10070 1586 aa21.52■■□□□ 1.04
CDC42-203ENST00000400259 MROH2AA6NES4 1674 aa21.51■■□□□ 1.03
CDC42-203ENST00000400259 ZBED9Q6R2W3 1325 aa21.51■■□□□ 1.03
CDC42-203ENST00000400259 FAM9BQ8IZU0 186 aa21.5■■□□□ 1.03
CDC42-203ENST00000400259 UGGT1Q9NYU2 1555 aa21.5■■□□□ 1.03
CDC42-203ENST00000400259 DISP3Q9P2K9 1392 aa21.49■■□□□ 1.03
CDC42-203ENST00000400259 BCANQ96GW7 911 aa21.49■■□□□ 1.03
CDC42-203ENST00000400259 NEFLP07196 543 aa21.48■■□□□ 1.03
CDC42-203ENST00000400259 FKBP8Q14318 412 aa21.48■■□□□ 1.03
CDC42-203ENST00000400259 SCAF11Q99590 1463 aaKnown RBP21.48■■□□□ 1.03
CDC42-203ENST00000400259 DIP2CQ9Y2E4 1556 aa21.48■■□□□ 1.03
CDC42-203ENST00000400259 RALBP1Q15311 655 aa21.48■■□□□ 1.03
CDC42-203ENST00000400259 ADGRB3O60242 1522 aa21.47■■□□□ 1.03
CDC42-203ENST00000400259 ABCC3O15438 1527 aa21.46■■□□□ 1.03
CDC42-203ENST00000400259 CAMSAP1Q5T5Y3 1602 aa21.45■■□□□ 1.03
CDC42-203ENST00000400259 BRD4O60885 1362 aaPredicted RBP21.45■■□□□ 1.02
CDC42-203ENST00000400259 TMF1P82094 1093 aa21.45■■□□□ 1.02
CDC42-203ENST00000400259 NRXN1Q9ULB1 1477 aa21.45■■□□□ 1.02
CDC42-203ENST00000400259 RIMBP3CA6NJZ7 1639 aa21.45■■□□□ 1.02
CDC42-203ENST00000400259 RIMBP3BA6NNM3 1639 aa21.45■■□□□ 1.02
CDC42-203ENST00000400259 RIMBP3Q9UFD9 1639 aa21.45■■□□□ 1.02
CDC42-203ENST00000400259 MYBBP1AQ9BQG0 1328 aaKnown RBP21.44■■□□□ 1.02
CDC42-203ENST00000400259 WASHC2CQ9Y4E1 1318 aa21.44■■□□□ 1.02
CDC42-203ENST00000400259 PARD3Q8TEW0 1356 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms