RNA–Protein interactions for RNA: ENST00000399916.5

RUNX3-203, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RUNX3, Length 4,340 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-203ENST00000399916 PDIA4P13667 645 aaKnown RBP17.49■□□□□ 0.39
RUNX3-203ENST00000399916 MYOM3Q5VTT5 1437 aa17.48■□□□□ 0.39
RUNX3-203ENST00000399916 MAP3K1Q13233 1512 aa17.48■□□□□ 0.39
RUNX3-203ENST00000399916 ESPNB1AK53 854 aa17.48■□□□□ 0.39
RUNX3-203ENST00000399916 FAM161AQ3B820 660 aa17.48■□□□□ 0.39
RUNX3-203ENST00000399916 NCOA2Q15596 1464 aa17.48■□□□□ 0.39
RUNX3-203ENST00000399916 HSCBQ8IWL3 235 aa17.47■□□□□ 0.39
RUNX3-203ENST00000399916 RRP1P56182 461 aaKnown RBP17.46■□□□□ 0.39
RUNX3-203ENST00000399916 DCAF11Q8TEB1 546 aa17.46■□□□□ 0.39
RUNX3-203ENST00000399916 CRBNQ96SW2 442 aa17.46■□□□□ 0.39
RUNX3-203ENST00000399916 FYCO1Q9BQS8 1478 aa17.46■□□□□ 0.39
RUNX3-203ENST00000399916 MS4A1P11836 297 aa17.45■□□□□ 0.38
RUNX3-203ENST00000399916 TPM2P07951 284 aa17.45■□□□□ 0.38
RUNX3-203ENST00000399916 PLEKHD1A6NEE1 506 aa17.44■□□□□ 0.38
RUNX3-203ENST00000399916 CHMP4BQ9H444 224 aaKnown RBP17.44■□□□□ 0.38
RUNX3-203ENST00000399916 RGL3Q3MIN7 710 aa17.43■□□□□ 0.38
RUNX3-203ENST00000399916 PDCL3Q9H2J4 239 aa17.43■□□□□ 0.38
RUNX3-203ENST00000399916 PKD2Q13563 968 aa17.43■□□□□ 0.38
RUNX3-203ENST00000399916 ZNF644Q9H582 1327 aaPredicted RBP17.42■□□□□ 0.38
RUNX3-203ENST00000399916 WASHC2CQ9Y4E1 1318 aa17.42■□□□□ 0.38
RUNX3-203ENST00000399916 CC2D1BQ5T0F9 858 aaKnown RBP17.42■□□□□ 0.38
RUNX3-203ENST00000399916 MFAP1P55081 439 aaKnown RBP17.42■□□□□ 0.38
RUNX3-203ENST00000399916 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.42■□□□□ 0.38
RUNX3-203ENST00000399916 NEUROD2Q15784 382 aa17.41■□□□□ 0.38
RUNX3-203ENST00000399916 PANK2Q9BZ23 570 aa17.41■□□□□ 0.38
RUNX3-203ENST00000399916 PAXIP1Q6ZW49 1069 aaPredicted RBP17.41■□□□□ 0.38
RUNX3-203ENST00000399916 CYB5RLQ6IPT4 315 aa17.4■□□□□ 0.38
RUNX3-203ENST00000399916 CFDP1Q9UEE9 299 aaPredicted RBP17.4■□□□□ 0.38
RUNX3-203ENST00000399916 AEBP1Q8IUX7 1158 aa17.39■□□□□ 0.37
RUNX3-203ENST00000399916 SYNJ2O15056 1496 aa17.39■□□□□ 0.37
RUNX3-203ENST00000399916 MAGI1Q96QZ7 1491 aaPredicted RBP17.39■□□□□ 0.37
RUNX3-203ENST00000399916 E9PSI1 815 aa17.38■□□□□ 0.37
RUNX3-203ENST00000399916 MRE11P49959 708 aa17.38■□□□□ 0.37
RUNX3-203ENST00000399916 CHMP4AQ9BY43 222 aa17.38■□□□□ 0.37
RUNX3-203ENST00000399916 CHAF1AQ13111 956 aaPredicted RBP17.38■□□□□ 0.37
RUNX3-203ENST00000399916 USP47Q96K76 1375 aa17.38■□□□□ 0.37
RUNX3-203ENST00000399916 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.38■□□□□ 0.37
RUNX3-203ENST00000399916 VGLL3A8MV65 326 aa17.37■□□□□ 0.37
RUNX3-203ENST00000399916 GBP4Q96PP9 640 aa17.37■□□□□ 0.37
RUNX3-203ENST00000399916 PTPN23Q9H3S7 1636 aa17.37■□□□□ 0.37
RUNX3-203ENST00000399916 ST20-MTHFSA0A0A6YYL1 179 aa17.37■□□□□ 0.37
RUNX3-203ENST00000399916 TRAK2O60296 914 aa17.37■□□□□ 0.37
RUNX3-203ENST00000399916 MPNDQ8N594 471 aa17.36■□□□□ 0.37
RUNX3-203ENST00000399916 FGD1P98174 961 aa17.36■□□□□ 0.37
RUNX3-203ENST00000399916 PNISRQ8TF01 805 aaKnown RBP17.35■□□□□ 0.37
RUNX3-203ENST00000399916 SMG6Q86US8 1419 aaKnown RBP17.35■□□□□ 0.37
RUNX3-203ENST00000399916 PTPRGP23470 1445 aa17.35■□□□□ 0.37
RUNX3-203ENST00000399916 NCOA1Q15788 1441 aa17.35■□□□□ 0.37
RUNX3-203ENST00000399916 KIAA2012Q0VF49 1180 aa17.34■□□□□ 0.37
RUNX3-203ENST00000399916 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.34■□□□□ 0.37
RUNX3-203ENST00000399916 THOC2Q8NI27 1593 aaKnown RBP17.34■□□□□ 0.37
RUNX3-203ENST00000399916 GRIN2AQ12879 1464 aa17.34■□□□□ 0.37
RUNX3-203ENST00000399916 DDX49Q9Y6V7 483 aaKnown RBP17.34■□□□□ 0.37
RUNX3-203ENST00000399916 CDCA7LQ96GN5 454 aa17.33■□□□□ 0.37
RUNX3-203ENST00000399916 AAMPQ13685 434 aa17.33■□□□□ 0.36
RUNX3-203ENST00000399916 MAP7D2Q96T17 732 aa17.33■□□□□ 0.36
RUNX3-203ENST00000399916 CBX1P83916 185 aa17.33■□□□□ 0.36
RUNX3-203ENST00000399916 UQCRHLA0A096LP55 91 aa17.32■□□□□ 0.36
RUNX3-203ENST00000399916 UQCRHP07919 91 aa17.32■□□□□ 0.36
RUNX3-203ENST00000399916 EIF4G3O43432 1585 aaKnown RBP17.32■□□□□ 0.36
RUNX3-203ENST00000399916 NAP1L2Q9ULW6 460 aaPredicted RBP17.32■□□□□ 0.36
RUNX3-203ENST00000399916 PRG4Q92954 1404 aaPredicted RBP17.31■□□□□ 0.36
RUNX3-203ENST00000399916 APPP05067 770 aa17.3■□□□□ 0.36
RUNX3-203ENST00000399916 FOXD4L5Q5VV16 416 aaPredicted RBP17.3■□□□□ 0.36
RUNX3-203ENST00000399916 FOXD4L4Q8WXT5 416 aaPredicted RBP17.3■□□□□ 0.36
RUNX3-203ENST00000399916 GRPEL1Q9HAV7 217 aa17.3■□□□□ 0.36
RUNX3-203ENST00000399916 CGNQ9P2M7 1197 aaKnown RBP17.3■□□□□ 0.36
RUNX3-203ENST00000399916 CALD1Q05682 793 aaKnown RBP17.29■□□□□ 0.36
RUNX3-203ENST00000399916 CUL7Q14999 1698 aa17.29■□□□□ 0.36
RUNX3-203ENST00000399916 CLCN1P35523 988 aa17.29■□□□□ 0.36
RUNX3-203ENST00000399916 IGSF3O75054 1194 aa17.28■□□□□ 0.36
RUNX3-203ENST00000399916 XRCC6P12956 609 aaKnown RBP eCLIP17.28■□□□□ 0.36
RUNX3-203ENST00000399916 TSPY4P0CV99 314 aa17.28■□□□□ 0.36
RUNX3-203ENST00000399916 TSPY10P0CW01 314 aa17.28■□□□□ 0.36
RUNX3-203ENST00000399916 AEBP2Q6ZN18 517 aaPredicted RBP17.28■□□□□ 0.36
RUNX3-203ENST00000399916 TARBP1Q13395 1621 aaKnown RBP17.28■□□□□ 0.36
RUNX3-203ENST00000399916 KIAA0586Q9BVV6 1533 aa17.27■□□□□ 0.36
RUNX3-203ENST00000399916 MYBBP1AQ9BQG0 1328 aaKnown RBP17.27■□□□□ 0.36
RUNX3-203ENST00000399916 DDX11L8A8MPP1 907 aa17.27■□□□□ 0.36
RUNX3-203ENST00000399916 NASPP49321 788 aaPredicted RBP17.27■□□□□ 0.36
RUNX3-203ENST00000399916 EFCAB5A4FU69 1503 aa17.27■□□□□ 0.35
RUNX3-203ENST00000399916 RALBP1Q15311 655 aa17.26■□□□□ 0.35
RUNX3-203ENST00000399916 CENPQQ7L2Z9 268 aaPredicted RBP17.26■□□□□ 0.35
RUNX3-203ENST00000399916 NLRP13Q86W25 1043 aa17.25■□□□□ 0.35
RUNX3-203ENST00000399916 TRERF1Q96PN7 1200 aa17.25■□□□□ 0.35
RUNX3-203ENST00000399916 KIF15Q9NS87 1388 aa17.25■□□□□ 0.35
RUNX3-203ENST00000399916 CFAP43Q8NDM7 1665 aa17.25■□□□□ 0.35
RUNX3-203ENST00000399916 ANKRD30BQ9BXX2 1392 aa17.24■□□□□ 0.35
RUNX3-203ENST00000399916 FOXD4L6Q3SYB3 417 aaPredicted RBP17.23■□□□□ 0.35
RUNX3-203ENST00000399916 FOXD4L3Q6VB84 417 aaPredicted RBP17.23■□□□□ 0.35
RUNX3-203ENST00000399916 CLUAP1Q96AJ1 413 aa17.23■□□□□ 0.35
RUNX3-203ENST00000399916 NUP155O75694 1391 aa17.23■□□□□ 0.35
RUNX3-203ENST00000399916 TRHP20396 242 aaPredicted RBP17.23■□□□□ 0.35
RUNX3-203ENST00000399916 PTMSP20962 102 aa17.23■□□□□ 0.35
RUNX3-203ENST00000399916 KTN1Q86UP2 1357 aaKnown RBP17.22■□□□□ 0.35
RUNX3-203ENST00000399916 XPCQ01831 940 aaPredicted RBP17.22■□□□□ 0.35
RUNX3-203ENST00000399916 CHMP5Q9NZZ3 219 aa17.22■□□□□ 0.35
RUNX3-203ENST00000399916 RNF214Q8ND24 703 aa17.22■□□□□ 0.35
RUNX3-203ENST00000399916 FTSJ3Q8IY81 847 aaKnown RBP17.2■□□□□ 0.34
RUNX3-203ENST00000399916 ROCK2O75116 1388 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms