RNA–Protein interactions for RNA: ENST00000398844.6

SEC24A-202, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SEC24A, Length 6,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-202ENST00000398844 ARHGEF11O15085 1522 aa11.81□□□□□ -0.52
SEC24A-202ENST00000398844 CFAP43Q8NDM7 1665 aa11.8□□□□□ -0.52
SEC24A-202ENST00000398844 CAMSAP2Q08AD1 1489 aa11.8□□□□□ -0.52
SEC24A-202ENST00000398844 WASHC2CQ9Y4E1 1318 aa11.79□□□□□ -0.52
SEC24A-202ENST00000398844 C9orf84Q5VXU9 1444 aa11.79□□□□□ -0.52
SEC24A-202ENST00000398844 NUTM2FA1L443 756 aa11.78□□□□□ -0.52
SEC24A-202ENST00000398844 DDRGK1Q96HY6 314 aa11.78□□□□□ -0.52
SEC24A-202ENST00000398844 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.78□□□□□ -0.52
SEC24A-202ENST00000398844 ZBED9Q6R2W3 1325 aa11.78□□□□□ -0.52
SEC24A-202ENST00000398844 U2AF1L5P0DN76 240 aaPredicted RBP11.77□□□□□ -0.53
SEC24A-202ENST00000398844 U2AF1Q01081 240 aaKnown RBP eCLIP11.77□□□□□ -0.53
SEC24A-202ENST00000398844 AFAP1Q8N556 730 aa11.77□□□□□ -0.53
SEC24A-202ENST00000398844 CRBNQ96SW2 442 aa11.77□□□□□ -0.53
SEC24A-202ENST00000398844 BCL2L13Q9BXK5 485 aa11.76□□□□□ -0.53
SEC24A-202ENST00000398844 AKNAQ7Z591 1439 aa11.76□□□□□ -0.53
SEC24A-202ENST00000398844 CLUAP1Q96AJ1 413 aa11.76□□□□□ -0.53
SEC24A-202ENST00000398844 MYH16Q9H6N6 1097 aa11.76□□□□□ -0.53
SEC24A-202ENST00000398844 ABCC5O15440 1437 aa11.76□□□□□ -0.53
SEC24A-202ENST00000398844 NLRP13Q86W25 1043 aa11.76□□□□□ -0.53
SEC24A-202ENST00000398844 EIF3AQ14152 1382 aaKnown RBP11.75□□□□□ -0.53
SEC24A-202ENST00000398844 LMOD2Q6P5Q4 547 aa11.74□□□□□ -0.53
SEC24A-202ENST00000398844 SYNJ2O15056 1496 aa11.74□□□□□ -0.53
SEC24A-202ENST00000398844 RRP1P56182 461 aaKnown RBP11.74□□□□□ -0.53
SEC24A-202ENST00000398844 SLC4A3P48751 1232 aa11.74□□□□□ -0.53
SEC24A-202ENST00000398844 CDCA7LQ96GN5 454 aa11.74□□□□□ -0.53
SEC24A-202ENST00000398844 EIF5BO60841 1220 aaKnown RBP11.74□□□□□ -0.53
SEC24A-202ENST00000398844 PBRM1Q86U86 1689 aa11.74□□□□□ -0.53
SEC24A-202ENST00000398844 KIAA1107Q9UPP5 1409 aa11.74□□□□□ -0.53
SEC24A-202ENST00000398844 TROQ12816 1431 aaPredicted RBP11.73□□□□□ -0.53
SEC24A-202ENST00000398844 TMEM132EQ6IEE7 984 aa11.73□□□□□ -0.53
SEC24A-202ENST00000398844 DEKP35659 375 aaKnown RBP11.73□□□□□ -0.53
SEC24A-202ENST00000398844 APBB1O00213 710 aa11.73□□□□□ -0.53
SEC24A-202ENST00000398844 GRIN2AQ12879 1464 aa11.73□□□□□ -0.53
SEC24A-202ENST00000398844 MIA2Q96PC5 1412 aa11.72□□□□□ -0.53
SEC24A-202ENST00000398844 RSPH4AQ5TD94 716 aa11.72□□□□□ -0.53
SEC24A-202ENST00000398844 MAP3K1Q13233 1512 aa11.72□□□□□ -0.53
SEC24A-202ENST00000398844 A0A0G2JS52 829 aa11.72□□□□□ -0.53
SEC24A-202ENST00000398844 GOLGA2Q08379 1002 aa11.72□□□□□ -0.53
SEC24A-202ENST00000398844 ITPRIPQ8IWB1 547 aa11.71□□□□□ -0.53
SEC24A-202ENST00000398844 CYB5RLQ6IPT4 315 aa11.71□□□□□ -0.53
SEC24A-202ENST00000398844 TRHP20396 242 aaPredicted RBP11.71□□□□□ -0.54
SEC24A-202ENST00000398844 KIF14Q15058 1648 aa11.71□□□□□ -0.54
SEC24A-202ENST00000398844 KIAA0586Q9BVV6 1533 aa11.7□□□□□ -0.54
SEC24A-202ENST00000398844 MINK1Q8N4C8 1332 aaPredicted RBP11.7□□□□□ -0.54
SEC24A-202ENST00000398844 UGGT2Q9NYU1 1516 aa11.7□□□□□ -0.54
SEC24A-202ENST00000398844 RAPGEF6Q8TEU7 1601 aa11.7□□□□□ -0.54
SEC24A-202ENST00000398844 BECN1Q14457 450 aa11.69□□□□□ -0.54
SEC24A-202ENST00000398844 APAF1O14727 1248 aa11.69□□□□□ -0.54
SEC24A-202ENST00000398844 HDGFL2Q7Z4V5 671 aaPredicted RBP11.68□□□□□ -0.54
SEC24A-202ENST00000398844 CABP2Q9NPB3 220 aa11.68□□□□□ -0.54
SEC24A-202ENST00000398844 ADAMTS8Q9UP79 889 aa11.67□□□□□ -0.54
SEC24A-202ENST00000398844 MAGI1Q96QZ7 1491 aaPredicted RBP11.67□□□□□ -0.54
SEC24A-202ENST00000398844 PAK3O75914 559 aaPredicted RBP11.67□□□□□ -0.54
SEC24A-202ENST00000398844 CFAP70Q5T0N1 1121 aa11.67□□□□□ -0.54
SEC24A-202ENST00000398844 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.66□□□□□ -0.54
SEC24A-202ENST00000398844 NCLP19338 710 aaKnown RBP11.66□□□□□ -0.54
SEC24A-202ENST00000398844 ANKRD30BQ9BXX2 1392 aa11.66□□□□□ -0.54
SEC24A-202ENST00000398844 SMC4Q9NTJ3 1288 aa11.65□□□□□ -0.54
SEC24A-202ENST00000398844 ADAMTS12P58397 1594 aa11.65□□□□□ -0.54
SEC24A-202ENST00000398844 CENPJQ9HC77 1338 aaPredicted RBP11.65□□□□□ -0.54
SEC24A-202ENST00000398844 SKAP1Q86WV1 359 aa11.64□□□□□ -0.55
SEC24A-202ENST00000398844 ELL2O00472 640 aaPredicted RBP11.64□□□□□ -0.55
SEC24A-202ENST00000398844 IPO9Q96P70 1041 aaKnown RBP11.64□□□□□ -0.55
SEC24A-202ENST00000398844 SLKQ9H2G2 1235 aaPredicted RBP11.64□□□□□ -0.55
SEC24A-202ENST00000398844 TCERG1O14776 1098 aaKnown RBP11.64□□□□□ -0.55
SEC24A-202ENST00000398844 ERICH6BQ5W0A0 696 aa11.64□□□□□ -0.55
SEC24A-202ENST00000398844 COG6Q9Y2V7 657 aa11.63□□□□□ -0.55
SEC24A-202ENST00000398844 MFAP1P55081 439 aaKnown RBP11.62□□□□□ -0.55
SEC24A-202ENST00000398844 FOXD4L1Q9NU39 408 aa11.62□□□□□ -0.55
SEC24A-202ENST00000398844 PDE4AP27815 886 aa11.62□□□□□ -0.55
SEC24A-202ENST00000398844 KIAA0556O60303 1618 aa11.62□□□□□ -0.55
SEC24A-202ENST00000398844 SCAPERQ9BY12 1400 aa11.62□□□□□ -0.55
SEC24A-202ENST00000398844 TAOK2Q9UL54 1235 aa11.62□□□□□ -0.55
SEC24A-202ENST00000398844 WDR62O43379 1518 aa11.61□□□□□ -0.55
SEC24A-202ENST00000398844 ROCK1Q13464 1354 aa11.61□□□□□ -0.55
SEC24A-202ENST00000398844 NUP153P49790 1475 aaKnown RBP11.61□□□□□ -0.55
SEC24A-202ENST00000398844 HSP90AB1P08238 724 aaKnown RBP11.61□□□□□ -0.55
SEC24A-202ENST00000398844 ERBINQ96RT1 1412 aa11.61□□□□□ -0.55
SEC24A-202ENST00000398844 PPP2R1AP30153 589 aa11.61□□□□□ -0.55
SEC24A-202ENST00000398844 OSCARQ8IYS5 282 aa11.61□□□□□ -0.55
SEC24A-202ENST00000398844 EIF4G3O43432 1585 aaKnown RBP11.6□□□□□ -0.55
SEC24A-202ENST00000398844 MAGI3Q5TCQ9 1506 aa11.6□□□□□ -0.55
SEC24A-202ENST00000398844 LTV1Q96GA3 475 aaPredicted RBP11.6□□□□□ -0.55
SEC24A-202ENST00000398844 GGNBP2Q9H3C7 697 aa11.59□□□□□ -0.55
SEC24A-202ENST00000398844 KDM6BO15054 1643 aa11.59□□□□□ -0.55
SEC24A-202ENST00000398844 PANK1Q8TE04 598 aa11.59□□□□□ -0.55
SEC24A-202ENST00000398844 PDE3BQ13370 1112 aa11.59□□□□□ -0.55
SEC24A-202ENST00000398844 ABCA5Q8WWZ7 1642 aa11.59□□□□□ -0.55
SEC24A-202ENST00000398844 GPATCH8Q9UKJ3 1502 aaKnown RBP11.58□□□□□ -0.56
SEC24A-202ENST00000398844 GZF1Q9H116 711 aaPredicted RBP11.58□□□□□ -0.56
SEC24A-202ENST00000398844 CCDC141Q6ZP82 1450 aa11.58□□□□□ -0.56
SEC24A-202ENST00000398844 HMOX1P09601 288 aa11.58□□□□□ -0.56
SEC24A-202ENST00000398844 PNNQ9H307 717 aaKnown RBP11.58□□□□□ -0.56
SEC24A-202ENST00000398844 FAM69CQ0P6D2 419 aa11.58□□□□□ -0.56
SEC24A-202ENST00000398844 EVC2Q86UK5 1308 aa11.57□□□□□ -0.56
SEC24A-202ENST00000398844 PNISRQ8TF01 805 aaKnown RBP11.57□□□□□ -0.56
SEC24A-202ENST00000398844 ANP32BQ92688 251 aaKnown RBP11.57□□□□□ -0.56
SEC24A-202ENST00000398844 BRD4O60885 1362 aaPredicted RBP11.57□□□□□ -0.56
SEC24A-202ENST00000398844 TERF2IPQ9NYB0 399 aa11.57□□□□□ -0.56
SEC24A-202ENST00000398844 CGNL1Q0VF96 1302 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms