RNA–Protein interactions for RNA: ENST00000397932.6

TRPM2-204, Transcript of transient receptor potential cation channel subfamily M member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM2, Length 5,216 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM2-204ENST00000397932 KIF7Q2M1P5 1343 aa17.45■□□□□ 0.38
TRPM2-204ENST00000397932 WASHC2AQ641Q2 1341 aa17.45■□□□□ 0.38
TRPM2-204ENST00000397932 SENP3Q9H4L4 574 aaPredicted RBP17.45■□□□□ 0.38
TRPM2-204ENST00000397932 DDX11L8A8MPP1 907 aa17.44■□□□□ 0.38
TRPM2-204ENST00000397932 EXOC6Q8TAG9 804 aa17.44■□□□□ 0.38
TRPM2-204ENST00000397932 NCOA2Q15596 1464 aa17.44■□□□□ 0.38
TRPM2-204ENST00000397932 CENPQQ7L2Z9 268 aaPredicted RBP17.44■□□□□ 0.38
TRPM2-204ENST00000397932 TIAM1Q13009 1591 aa17.44■□□□□ 0.38
TRPM2-204ENST00000397932 HNRNPMP52272 730 aaKnown RBP eCLIP17.43■□□□□ 0.38
TRPM2-204ENST00000397932 BRPF3Q9ULD4 1205 aa17.43■□□□□ 0.38
TRPM2-204ENST00000397932 CCDC144AA2RUR9 1427 aa17.42■□□□□ 0.38
TRPM2-204ENST00000397932 SLC4A3P48751 1232 aa17.41■□□□□ 0.38
TRPM2-204ENST00000397932 IPO8O15397 1037 aaKnown RBP17.41■□□□□ 0.38
TRPM2-204ENST00000397932 MCCP23508 829 aa17.41■□□□□ 0.38
TRPM2-204ENST00000397932 TPM2P07951 284 aa17.41■□□□□ 0.38
TRPM2-204ENST00000397932 CSPP1Q1MSJ5 1256 aa17.41■□□□□ 0.38
TRPM2-204ENST00000397932 EFCAB5A4FU69 1503 aa17.4■□□□□ 0.38
TRPM2-204ENST00000397932 RAD54L2Q9Y4B4 1467 aa17.4■□□□□ 0.38
TRPM2-204ENST00000397932 GAPVD1Q14C86 1478 aa17.4■□□□□ 0.38
TRPM2-204ENST00000397932 RRP9O43818 475 aaKnown RBP17.39■□□□□ 0.38
TRPM2-204ENST00000397932 NOC3LQ8WTT2 800 aaKnown RBP17.39■□□□□ 0.38
TRPM2-204ENST00000397932 PANK3Q9H999 370 aa17.39■□□□□ 0.38
TRPM2-204ENST00000397932 HTATSF1O43719 755 aaKnown RBP17.39■□□□□ 0.37
TRPM2-204ENST00000397932 HAP1P54257 671 aaPredicted RBP17.39■□□□□ 0.37
TRPM2-204ENST00000397932 FGD1P98174 961 aa17.39■□□□□ 0.37
TRPM2-204ENST00000397932 FAM161AQ3B820 660 aa17.39■□□□□ 0.37
TRPM2-204ENST00000397932 KCNJ4P48050 445 aa17.39■□□□□ 0.37
TRPM2-204ENST00000397932 EFCAB2Q5VUJ9 269 aa17.39■□□□□ 0.37
TRPM2-204ENST00000397932 CFTRP13569 1480 aa17.39■□□□□ 0.37
TRPM2-204ENST00000397932 CENPJQ9HC77 1338 aaPredicted RBP17.38■□□□□ 0.37
TRPM2-204ENST00000397932 OS9Q13438 667 aaPredicted RBP17.38■□□□□ 0.37
TRPM2-204ENST00000397932 WDR97A6NE52 1622 aa17.38■□□□□ 0.37
TRPM2-204ENST00000397932 CRBNQ96SW2 442 aa17.36■□□□□ 0.37
TRPM2-204ENST00000397932 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.36■□□□□ 0.37
TRPM2-204ENST00000397932 HFM1A2PYH4 1435 aa17.36■□□□□ 0.37
TRPM2-204ENST00000397932 CCDC146Q8IYE0 955 aa17.35■□□□□ 0.37
TRPM2-204ENST00000397932 SRPK2P78362 688 aaKnown RBP17.35■□□□□ 0.37
TRPM2-204ENST00000397932 TEX35Q5T0J7 233 aa17.35■□□□□ 0.37
TRPM2-204ENST00000397932 CCDC66A2RUB6 948 aa17.35■□□□□ 0.37
TRPM2-204ENST00000397932 U2AF1L5P0DN76 240 aaPredicted RBP17.34■□□□□ 0.37
TRPM2-204ENST00000397932 U2AF1Q01081 240 aaKnown RBP eCLIP17.34■□□□□ 0.37
TRPM2-204ENST00000397932 SKOR2Q2VWA4 1001 aaPredicted RBP17.34■□□□□ 0.37
TRPM2-204ENST00000397932 PLIN1O60240 522 aa17.34■□□□□ 0.37
TRPM2-204ENST00000397932 PDE4CQ08493 712 aa17.34■□□□□ 0.37
TRPM2-204ENST00000397932 MIA2Q96PC5 1412 aa17.34■□□□□ 0.37
TRPM2-204ENST00000397932 ITPRIPQ8IWB1 547 aa17.33■□□□□ 0.37
TRPM2-204ENST00000397932 NOM1Q5C9Z4 860 aaKnown RBP17.32■□□□□ 0.36
TRPM2-204ENST00000397932 BRD4O60885 1362 aaPredicted RBP17.32■□□□□ 0.36
TRPM2-204ENST00000397932 A0A0G2JS52 829 aa17.32■□□□□ 0.36
TRPM2-204ENST00000397932 R3HCC1Q9Y3T6 440 aaKnown RBP17.31■□□□□ 0.36
TRPM2-204ENST00000397932 EHBP1L1Q8N3D4 1523 aa17.31■□□□□ 0.36
TRPM2-204ENST00000397932 DDX49Q9Y6V7 483 aaKnown RBP17.31■□□□□ 0.36
TRPM2-204ENST00000397932 E9PSI1 815 aa17.31■□□□□ 0.36
TRPM2-204ENST00000397932 PHF14O94880 888 aa17.31■□□□□ 0.36
TRPM2-204ENST00000397932 MFAP1P55081 439 aaKnown RBP17.31■□□□□ 0.36
TRPM2-204ENST00000397932 NFKBIBQ15653 356 aa17.31■□□□□ 0.36
TRPM2-204ENST00000397932 JPH4Q96JJ6 628 aa17.31■□□□□ 0.36
TRPM2-204ENST00000397932 GPS2Q13227 327 aa17.3■□□□□ 0.36
TRPM2-204ENST00000397932 PLEKHG5O94827 1062 aa17.3■□□□□ 0.36
TRPM2-204ENST00000397932 HDGFL2Q7Z4V5 671 aaPredicted RBP17.29■□□□□ 0.36
TRPM2-204ENST00000397932 CGNL1Q0VF96 1302 aa17.28■□□□□ 0.36
TRPM2-204ENST00000397932 SMC4Q9NTJ3 1288 aa17.28■□□□□ 0.36
TRPM2-204ENST00000397932 HMGXB3Q12766 1538 aa17.27■□□□□ 0.36
TRPM2-204ENST00000397932 MAP3K1Q13233 1512 aa17.27■□□□□ 0.36
TRPM2-204ENST00000397932 NGEFQ8N5V2 710 aa17.27■□□□□ 0.36
TRPM2-204ENST00000397932 FOXD4L1Q9NU39 408 aa17.25■□□□□ 0.35
TRPM2-204ENST00000397932 NAP1L2Q9ULW6 460 aaPredicted RBP17.25■□□□□ 0.35
TRPM2-204ENST00000397932 RBM10P98175 930 aaKnown RBP17.25■□□□□ 0.35
TRPM2-204ENST00000397932 ZMYND15Q9H091 742 aa17.25■□□□□ 0.35
TRPM2-204ENST00000397932 ZNF644Q9H582 1327 aaPredicted RBP17.25■□□□□ 0.35
TRPM2-204ENST00000397932 SAFB2Q14151 953 aaKnown RBP eCLIP17.25■□□□□ 0.35
TRPM2-204ENST00000397932 TAOK2Q9UL54 1235 aa17.25■□□□□ 0.35
TRPM2-204ENST00000397932 SPAG9O60271 1321 aaKnown RBP17.25■□□□□ 0.35
TRPM2-204ENST00000397932 TPM4P67936 248 aa17.24■□□□□ 0.35
TRPM2-204ENST00000397932 CLUAP1Q96AJ1 413 aa17.24■□□□□ 0.35
TRPM2-204ENST00000397932 ANKRD50Q9ULJ7 1429 aa17.23■□□□□ 0.35
TRPM2-204ENST00000397932 MRE11P49959 708 aa17.23■□□□□ 0.35
TRPM2-204ENST00000397932 SMG6Q86US8 1419 aaKnown RBP17.23■□□□□ 0.35
TRPM2-204ENST00000397932 KIF3BO15066 747 aa17.23■□□□□ 0.35
TRPM2-204ENST00000397932 KIAA1211Q6ZU35 1233 aa17.23■□□□□ 0.35
TRPM2-204ENST00000397932 GGT6Q6P531 493 aa17.22■□□□□ 0.35
TRPM2-204ENST00000397932 ZNF592Q92610 1267 aa17.2■□□□□ 0.34
TRPM2-204ENST00000397932 STK26Q9P289 416 aa17.2■□□□□ 0.34
TRPM2-204ENST00000397932 SUPT6HQ7KZ85 1726 aaKnown RBP17.19■□□□□ 0.34
TRPM2-204ENST00000397932 TERF2IPQ9NYB0 399 aa17.19■□□□□ 0.34
TRPM2-204ENST00000397932 CWC15Q9P013 229 aaKnown RBP17.19■□□□□ 0.34
TRPM2-204ENST00000397932 APAF1O14727 1248 aa17.18■□□□□ 0.34
TRPM2-204ENST00000397932 NBPF8Q3BBV2 869 aa17.18■□□□□ 0.34
TRPM2-204ENST00000397932 RTF1Q92541 710 aaKnown RBP17.18■□□□□ 0.34
TRPM2-204ENST00000397932 NAIPQ13075 1403 aa17.17■□□□□ 0.34
TRPM2-204ENST00000397932 PRDM2Q13029 1718 aa17.17■□□□□ 0.34
TRPM2-204ENST00000397932 AKNAQ7Z591 1439 aa17.17■□□□□ 0.34
TRPM2-204ENST00000397932 AQRO60306 1485 aaKnown RBP eCLIP17.17■□□□□ 0.34
TRPM2-204ENST00000397932 GNL2Q13823 731 aaKnown RBP17.16■□□□□ 0.34
TRPM2-204ENST00000397932 CCAR2Q8N163 923 aaKnown RBP17.16■□□□□ 0.34
TRPM2-204ENST00000397932 DIAPH3Q9NSV4 1193 aa17.16■□□□□ 0.34
TRPM2-204ENST00000397932 COG6Q9Y2V7 657 aa17.16■□□□□ 0.34
TRPM2-204ENST00000397932 PCF11O94913 1555 aaKnown RBP17.16■□□□□ 0.34
TRPM2-204ENST00000397932 ZKSCAN2Q63HK3 967 aa17.16■□□□□ 0.34
TRPM2-204ENST00000397932 KIAA1107Q9UPP5 1409 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms