RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 NUDCQ9Y266 331 aa21.5■■□□□ 1.03
CHMP1A-201ENST00000397901 ANKRD50Q9ULJ7 1429 aa21.5■■□□□ 1.03
CHMP1A-201ENST00000397901 SAMD9LQ8IVG5 1584 aa21.49■■□□□ 1.03
CHMP1A-201ENST00000397901 ANP32AP39687 249 aaKnown RBP21.49■■□□□ 1.03
CHMP1A-201ENST00000397901 TTC37Q6PGP7 1564 aa21.46■■□□□ 1.03
CHMP1A-201ENST00000397901 ZBTB47Q9UFB7 747 aaPredicted RBP21.46■■□□□ 1.03
CHMP1A-201ENST00000397901 KDM5CP41229 1560 aa21.44■■□□□ 1.02
CHMP1A-201ENST00000397901 HNRNPMP52272 730 aaKnown RBP eCLIP21.44■■□□□ 1.02
CHMP1A-201ENST00000397901 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.44■■□□□ 1.02
CHMP1A-201ENST00000397901 TSPY4P0CV99 314 aa21.43■■□□□ 1.02
CHMP1A-201ENST00000397901 TSPY10P0CW01 314 aa21.43■■□□□ 1.02
CHMP1A-201ENST00000397901 TMC1Q8TDI8 760 aa21.43■■□□□ 1.02
CHMP1A-201ENST00000397901 RTN4Q9NQC3 1192 aaKnown RBP21.43■■□□□ 1.02
CHMP1A-201ENST00000397901 CCDC141Q6ZP82 1450 aa21.42■■□□□ 1.02
CHMP1A-201ENST00000397901 PNISRQ8TF01 805 aaKnown RBP21.42■■□□□ 1.02
CHMP1A-201ENST00000397901 CARD11Q9BXL7 1154 aa21.41■■□□□ 1.02
CHMP1A-201ENST00000397901 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.41■■□□□ 1.02
CHMP1A-201ENST00000397901 KDM5DQ9BY66 1539 aa21.41■■□□□ 1.02
CHMP1A-201ENST00000397901 RNF123Q5XPI4 1314 aa21.4■■□□□ 1.02
CHMP1A-201ENST00000397901 KIF15Q9NS87 1388 aa21.4■■□□□ 1.02
CHMP1A-201ENST00000397901 KDM2AQ9Y2K7 1162 aa21.39■■□□□ 1.02
CHMP1A-201ENST00000397901 UHRF1BP1LA0JNW5 1464 aa21.39■■□□□ 1.02
CHMP1A-201ENST00000397901 ARID4BQ4LE39 1312 aaPredicted RBP21.39■■□□□ 1.01
CHMP1A-201ENST00000397901 NUP155O75694 1391 aa21.39■■□□□ 1.01
CHMP1A-201ENST00000397901 MYO5CQ9NQX4 1742 aa21.38■■□□□ 1.01
CHMP1A-201ENST00000397901 ZCCHC11Q5TAX3 1644 aaKnown RBP21.37■■□□□ 1.01
CHMP1A-201ENST00000397901 RSPH4AQ5TD94 716 aa21.37■■□□□ 1.01
CHMP1A-201ENST00000397901 ARHGAP5Q13017 1502 aa21.37■■□□□ 1.01
CHMP1A-201ENST00000397901 SYCP2Q9BX26 1530 aa21.37■■□□□ 1.01
CHMP1A-201ENST00000397901 RALGAPBQ86X10 1494 aa21.37■■□□□ 1.01
CHMP1A-201ENST00000397901 ROCK2O75116 1388 aaKnown RBP21.36■■□□□ 1.01
CHMP1A-201ENST00000397901 MAST1Q9Y2H9 1570 aa21.36■■□□□ 1.01
CHMP1A-201ENST00000397901 ST20-MTHFSA0A0A6YYL1 179 aa21.35■■□□□ 1.01
CHMP1A-201ENST00000397901 UHRF1BP1Q6BDS2 1440 aa21.35■■□□□ 1.01
CHMP1A-201ENST00000397901 USP35Q9P2H5 1018 aa21.33■■□□□ 1.01
CHMP1A-201ENST00000397901 DCAF11Q8TEB1 546 aa21.31■■□□□ 1
CHMP1A-201ENST00000397901 PLEKHH2Q8IVE3 1493 aa21.3■■□□□ 1
CHMP1A-201ENST00000397901 WASHC2CQ9Y4E1 1318 aa21.3■■□□□ 1
CHMP1A-201ENST00000397901 MYBBP1AQ9BQG0 1328 aaKnown RBP21.29■■□□□ 1
CHMP1A-201ENST00000397901 PLXNC1O60486 1568 aa21.27■■□□□ 1
CHMP1A-201ENST00000397901 PLCH2O75038 1416 aa21.27■■□□□ 1
CHMP1A-201ENST00000397901 LRPPRCP42704 1394 aaKnown RBP21.27■■□□□ 1
CHMP1A-201ENST00000397901 ARHGEF12Q9NZN5 1544 aa21.27■■□□□ 1
CHMP1A-201ENST00000397901 BRD4O60885 1362 aaPredicted RBP21.26■□□□□ 0.99
CHMP1A-201ENST00000397901 FAM135AQ9P2D6 1515 aa21.25■□□□□ 0.99
CHMP1A-201ENST00000397901 RALBP1Q15311 655 aa21.24■□□□□ 0.99
CHMP1A-201ENST00000397901 UNC13BO14795 1591 aa21.24■□□□□ 0.99
CHMP1A-201ENST00000397901 RRP1P56182 461 aaKnown RBP21.22■□□□□ 0.99
CHMP1A-201ENST00000397901 NEFMP07197 916 aa21.21■□□□□ 0.99
CHMP1A-201ENST00000397901 EXOC6Q8TAG9 804 aa21.21■□□□□ 0.99
CHMP1A-201ENST00000397901 ABCC1P33527 1531 aa21.2■□□□□ 0.98
CHMP1A-201ENST00000397901 KTN1Q86UP2 1357 aaKnown RBP21.19■□□□□ 0.98
CHMP1A-201ENST00000397901 EFCAB2Q5VUJ9 269 aa21.18■□□□□ 0.98
CHMP1A-201ENST00000397901 RCAN3Q9UKA8 241 aa21.18■□□□□ 0.98
CHMP1A-201ENST00000397901 DUOX2Q9NRD8 1548 aa21.17■□□□□ 0.98
CHMP1A-201ENST00000397901 E9PCH4 1651 aa21.17■□□□□ 0.98
CHMP1A-201ENST00000397901 ARAP3Q8WWN8 1544 aa21.17■□□□□ 0.98
CHMP1A-201ENST00000397901 PPM1GO15355 546 aaPredicted RBP21.16■□□□□ 0.98
CHMP1A-201ENST00000397901 RGL3Q3MIN7 710 aa21.16■□□□□ 0.98
CHMP1A-201ENST00000397901 NLRP13Q86W25 1043 aa21.16■□□□□ 0.98
CHMP1A-201ENST00000397901 IQGAP3Q86VI3 1631 aa21.16■□□□□ 0.98
CHMP1A-201ENST00000397901 NPM2Q86SE8 214 aaKnown RBP21.14■□□□□ 0.98
CHMP1A-201ENST00000397901 MAGI2Q86UL8 1455 aa21.14■□□□□ 0.97
CHMP1A-201ENST00000397901 NBPF1Q3BBV0 1214 aa21.14■□□□□ 0.97
CHMP1A-201ENST00000397901 ERBINQ96RT1 1412 aa21.13■□□□□ 0.97
CHMP1A-201ENST00000397901 TRAPPC8Q9Y2L5 1435 aa21.13■□□□□ 0.97
CHMP1A-201ENST00000397901 PARD3Q8TEW0 1356 aa21.13■□□□□ 0.97
CHMP1A-201ENST00000397901 EIF5BO60841 1220 aaKnown RBP21.13■□□□□ 0.97
CHMP1A-201ENST00000397901 WDR7Q9Y4E6 1490 aa21.13■□□□□ 0.97
CHMP1A-201ENST00000397901 CDCA7LQ96GN5 454 aa21.12■□□□□ 0.97
CHMP1A-201ENST00000397901 LAS1LQ9Y4W2 734 aaKnown RBP21.11■□□□□ 0.97
CHMP1A-201ENST00000397901 PRAG1Q86YV5 1406 aa21.11■□□□□ 0.97
CHMP1A-201ENST00000397901 CC2D1BQ5T0F9 858 aaKnown RBP21.11■□□□□ 0.97
CHMP1A-201ENST00000397901 PLA2R1Q13018 1463 aa21.1■□□□□ 0.97
CHMP1A-201ENST00000397901 CCDC144AA2RUR9 1427 aa21.1■□□□□ 0.97
CHMP1A-201ENST00000397901 BRPF3Q9ULD4 1205 aa21.09■□□□□ 0.97
CHMP1A-201ENST00000397901 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.09■□□□□ 0.972e-6■■□□□ 11.4
CHMP1A-201ENST00000397901 PER1O15534 1290 aaPredicted RBP21.08■□□□□ 0.97
CHMP1A-201ENST00000397901 TRPM1Q7Z4N2 1603 aa21.08■□□□□ 0.96
CHMP1A-201ENST00000397901 ABCA9Q8IUA7 1624 aa21.07■□□□□ 0.96
CHMP1A-201ENST00000397901 PDE3BQ13370 1112 aa21.07■□□□□ 0.96
CHMP1A-201ENST00000397901 TCERG1O14776 1098 aaKnown RBP21.06■□□□□ 0.96
CHMP1A-201ENST00000397901 PLIN1O60240 522 aa21.06■□□□□ 0.96
CHMP1A-201ENST00000397901 RTEL1-TNFRSF6BF6WH68 1400 aa21.06■□□□□ 0.96
CHMP1A-201ENST00000397901 ZFYVE16Q7Z3T8 1539 aa21.05■□□□□ 0.96
CHMP1A-201ENST00000397901 GSE1Q14687 1217 aa21.05■□□□□ 0.96
CHMP1A-201ENST00000397901 DISP3Q9P2K9 1392 aa21.05■□□□□ 0.96
CHMP1A-201ENST00000397901 PDE4AP27815 886 aa21.04■□□□□ 0.96
CHMP1A-201ENST00000397901 ATP10AO60312 1499 aa21.04■□□□□ 0.96
CHMP1A-201ENST00000397901 RSPH6AQ9H0K4 717 aa21.03■□□□□ 0.96
CHMP1A-201ENST00000397901 PANK3Q9H999 370 aa21.02■□□□□ 0.96
CHMP1A-201ENST00000397901 A2MP01023 1474 aa21.02■□□□□ 0.96
CHMP1A-201ENST00000397901 SPAG9O60271 1321 aaKnown RBP21.02■□□□□ 0.96
CHMP1A-201ENST00000397901 COL17A1Q9UMD9 1497 aaPredicted RBP21.02■□□□□ 0.96
CHMP1A-201ENST00000397901 FANCAO15360 1455 aa21.01■□□□□ 0.95
CHMP1A-201ENST00000397901 AFAP1Q8N556 730 aa21.01■□□□□ 0.95
CHMP1A-201ENST00000397901 TESK2Q96S53 571 aa21.01■□□□□ 0.95
CHMP1A-201ENST00000397901 ASXL2Q76L83 1435 aa21■□□□□ 0.95
CHMP1A-201ENST00000397901 GPRASP1Q5JY77 1395 aa20.99■□□□□ 0.95
CHMP1A-201ENST00000397901 SKAP1Q86WV1 359 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms