RNA–Protein interactions for RNA: ENST00000397854.7

ITGB2-207, Transcript of integrin subunit beta 2, humanhuman

TSL 1 (best) BASIC

Gene ITGB2, Length 2,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB2-207ENST00000397854 NAP1L5Q96NT1 182 aaPredicted RBP20.88■□□□□ 0.93
ITGB2-207ENST00000397854 NUP160Q12769 1436 aa20.88■□□□□ 0.93
ITGB2-207ENST00000397854 SLC4A3P48751 1232 aa20.87■□□□□ 0.93
ITGB2-207ENST00000397854 L1TD1Q5T7N2 865 aaKnown RBP20.86■□□□□ 0.93
ITGB2-207ENST00000397854 PNNQ9H307 717 aaKnown RBP20.84■□□□□ 0.93
ITGB2-207ENST00000397854 CARMIL2Q6F5E8 1435 aa20.84■□□□□ 0.93
ITGB2-207ENST00000397854 RPRD2Q5VT52 1461 aaKnown RBP20.83■□□□□ 0.93
ITGB2-207ENST00000397854 PZPP20742 1482 aa20.83■□□□□ 0.92
ITGB2-207ENST00000397854 POLR1AO95602 1720 aaPredicted RBP20.82■□□□□ 0.92
ITGB2-207ENST00000397854 TEX14Q8IWB6 1497 aa20.82■□□□□ 0.92
ITGB2-207ENST00000397854 KIF7Q2M1P5 1343 aa20.8■□□□□ 0.92
ITGB2-207ENST00000397854 ITSN2Q9NZM3 1697 aa20.8■□□□□ 0.92
ITGB2-207ENST00000397854 CLCN1P35523 988 aa20.8■□□□□ 0.92
ITGB2-207ENST00000397854 ATP10BO94823 1461 aa20.79■□□□□ 0.92
ITGB2-207ENST00000397854 ADCY10Q96PN6 1610 aa20.78■□□□□ 0.92
ITGB2-207ENST00000397854 PLEKHD1A6NEE1 506 aa20.78■□□□□ 0.92
ITGB2-207ENST00000397854 CDC42BPAQ5VT25 1732 aa20.77■□□□□ 0.92
ITGB2-207ENST00000397854 RCAN3Q9UKA8 241 aa20.77■□□□□ 0.92
ITGB2-207ENST00000397854 ABCA8O94911 1581 aa20.77■□□□□ 0.92
ITGB2-207ENST00000397854 DHX29Q7Z478 1369 aaKnown RBP20.76■□□□□ 0.91
ITGB2-207ENST00000397854 ADGBQ8N7X0 1667 aa20.76■□□□□ 0.91
ITGB2-207ENST00000397854 CROCC2H7BZ55 1655 aa20.75■□□□□ 0.91
ITGB2-207ENST00000397854 PKD2Q13563 968 aa20.75■□□□□ 0.91
ITGB2-207ENST00000397854 ZNF326Q5BKZ1 582 aaKnown RBP20.75■□□□□ 0.91
ITGB2-207ENST00000397854 PNISRQ8TF01 805 aaKnown RBP20.74■□□□□ 0.91
ITGB2-207ENST00000397854 HNRNPMP52272 730 aaKnown RBP eCLIP20.73■□□□□ 0.91
ITGB2-207ENST00000397854 POGKQ9P215 609 aa20.73■□□□□ 0.91
ITGB2-207ENST00000397854 ABCC10Q5T3U5 1492 aa20.72■□□□□ 0.91
ITGB2-207ENST00000397854 SPATA31E1Q6ZUB1 1445 aa20.71■□□□□ 0.91
ITGB2-207ENST00000397854 ADGRL2O95490 1459 aa20.7■□□□□ 0.9
ITGB2-207ENST00000397854 ANKRD50Q9ULJ7 1429 aa20.7■□□□□ 0.9
ITGB2-207ENST00000397854 ANKRD30AQ9BXX3 1397 aa20.7■□□□□ 0.9
ITGB2-207ENST00000397854 FAM161AQ3B820 660 aa20.69■□□□□ 0.9
ITGB2-207ENST00000397854 CNGB1Q14028 1251 aaPredicted RBP20.69■□□□□ 0.9
ITGB2-207ENST00000397854 LRPPRCP42704 1394 aaKnown RBP20.68■□□□□ 0.9
ITGB2-207ENST00000397854 CENPJQ9HC77 1338 aaPredicted RBP20.68■□□□□ 0.9
ITGB2-207ENST00000397854 KIAA1107Q9UPP5 1409 aa20.68■□□□□ 0.9
ITGB2-207ENST00000397854 C9orf84Q5VXU9 1444 aa20.66■□□□□ 0.9
ITGB2-207ENST00000397854 PTPRGP23470 1445 aa20.66■□□□□ 0.9
ITGB2-207ENST00000397854 NUP155O75694 1391 aa20.65■□□□□ 0.9
ITGB2-207ENST00000397854 KTN1Q86UP2 1357 aaKnown RBP20.65■□□□□ 0.9
ITGB2-207ENST00000397854 SKAP1Q86WV1 359 aa20.65■□□□□ 0.9
ITGB2-207ENST00000397854 PDE3BQ13370 1112 aa20.64■□□□□ 0.9
ITGB2-207ENST00000397854 TMC1Q8TDI8 760 aa20.64■□□□□ 0.9
ITGB2-207ENST00000397854 C8orf34Q49A92 452 aa20.64■□□□□ 0.89
ITGB2-207ENST00000397854 SENP3-EIF4A1A0A087X0R7 540 aa20.63■□□□□ 0.89
ITGB2-207ENST00000397854 CALD1Q05682 793 aaKnown RBP20.63■□□□□ 0.89
ITGB2-207ENST00000397854 POLR3GLQ9BT43 218 aa20.63■□□□□ 0.89
ITGB2-207ENST00000397854 CHD1O14646 1710 aa20.63■□□□□ 0.89
ITGB2-207ENST00000397854 RBM10P98175 930 aaKnown RBP20.61■□□□□ 0.89
ITGB2-207ENST00000397854 MBD5Q9P267 1494 aa20.61■□□□□ 0.89
ITGB2-207ENST00000397854 PDCL3Q9H2J4 239 aa20.61■□□□□ 0.89
ITGB2-207ENST00000397854 TSPY4P0CV99 314 aa20.6■□□□□ 0.89
ITGB2-207ENST00000397854 TSPY10P0CW01 314 aa20.6■□□□□ 0.89
ITGB2-207ENST00000397854 KDM2BQ8NHM5 1336 aa20.6■□□□□ 0.89
ITGB2-207ENST00000397854 TPM2P07951 284 aa20.59■□□□□ 0.89
ITGB2-207ENST00000397854 ERCC6L2Q5T890 1561 aa20.59■□□□□ 0.89
ITGB2-207ENST00000397854 BCORL1Q5H9F3 1711 aa20.59■□□□□ 0.89
ITGB2-207ENST00000397854 XRCC6P12956 609 aaKnown RBP eCLIP20.59■□□□□ 0.89
ITGB2-207ENST00000397854 CRBNQ96SW2 442 aa20.59■□□□□ 0.89
ITGB2-207ENST00000397854 KIF15Q9NS87 1388 aa20.59■□□□□ 0.89
ITGB2-207ENST00000397854 GOLGA6L3A6NEY3 463 aa20.58■□□□□ 0.89
ITGB2-207ENST00000397854 KDM2AQ9Y2K7 1162 aa20.58■□□□□ 0.89
ITGB2-207ENST00000397854 CDC42BPBQ9Y5S2 1711 aa20.58■□□□□ 0.88
ITGB2-207ENST00000397854 FSD2A1L4K1 749 aa20.57■□□□□ 0.88
ITGB2-207ENST00000397854 CENPQQ7L2Z9 268 aaPredicted RBP20.57■□□□□ 0.88
ITGB2-207ENST00000397854 BRD4O60885 1362 aaPredicted RBP20.57■□□□□ 0.88
ITGB2-207ENST00000397854 AAMPQ13685 434 aa20.56■□□□□ 0.88
ITGB2-207ENST00000397854 SAMD9LQ8IVG5 1584 aa20.56■□□□□ 0.88
ITGB2-207ENST00000397854 USP47Q96K76 1375 aa20.56■□□□□ 0.88
ITGB2-207ENST00000397854 SHANK2Q9UPX8 1470 aa20.55■□□□□ 0.88
ITGB2-207ENST00000397854 PRDM4Q9UKN5 801 aa20.54■□□□□ 0.88
ITGB2-207ENST00000397854 ARID4BQ4LE39 1312 aaPredicted RBP20.53■□□□□ 0.88
ITGB2-207ENST00000397854 A0A0U1RQG5 324 aaPredicted RBP20.53■□□□□ 0.88
ITGB2-207ENST00000397854 TTC37Q6PGP7 1564 aa20.51■□□□□ 0.87
ITGB2-207ENST00000397854 ROCK2O75116 1388 aaKnown RBP20.5■□□□□ 0.87
ITGB2-207ENST00000397854 PLIN1O60240 522 aa20.5■□□□□ 0.87
ITGB2-207ENST00000397854 BECN1Q14457 450 aa20.5■□□□□ 0.87
ITGB2-207ENST00000397854 PREX2Q70Z35 1606 aa20.49■□□□□ 0.87
ITGB2-207ENST00000397854 SYCP2Q9BX26 1530 aa20.49■□□□□ 0.87
ITGB2-207ENST00000397854 KDM5CP41229 1560 aa20.49■□□□□ 0.87
ITGB2-207ENST00000397854 FGD1P98174 961 aa20.48■□□□□ 0.87
ITGB2-207ENST00000397854 PANK2Q9BZ23 570 aa20.48■□□□□ 0.87
ITGB2-207ENST00000397854 MYBBP1AQ9BQG0 1328 aaKnown RBP20.48■□□□□ 0.87
ITGB2-207ENST00000397854 ESPNB1AK53 854 aa20.48■□□□□ 0.87
ITGB2-207ENST00000397854 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.48■□□□□ 0.87
ITGB2-207ENST00000397854 ARHGEF5Q12774 1597 aa20.48■□□□□ 0.87
ITGB2-207ENST00000397854 CCDC141Q6ZP82 1450 aa20.47■□□□□ 0.87
ITGB2-207ENST00000397854 CARD11Q9BXL7 1154 aa20.46■□□□□ 0.87
ITGB2-207ENST00000397854 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.45■□□□□ 0.86
ITGB2-207ENST00000397854 ARHGAP5Q13017 1502 aa20.45■□□□□ 0.86
ITGB2-207ENST00000397854 MRE11P49959 708 aa20.45■□□□□ 0.86
ITGB2-207ENST00000397854 KDM5DQ9BY66 1539 aa20.45■□□□□ 0.86
ITGB2-207ENST00000397854 ARXQ96QS3 562 aa20.44■□□□□ 0.86
ITGB2-207ENST00000397854 RALBP1Q15311 655 aa20.44■□□□□ 0.86
ITGB2-207ENST00000397854 FAM135AQ9P2D6 1515 aa20.43■□□□□ 0.86
ITGB2-207ENST00000397854 ST20-MTHFSA0A0A6YYL1 179 aa20.43■□□□□ 0.86
ITGB2-207ENST00000397854 RGL3Q3MIN7 710 aa20.43■□□□□ 0.86
ITGB2-207ENST00000397854 SHROOM2Q13796 1616 aa20.43■□□□□ 0.86
ITGB2-207ENST00000397854 ANTXR1Q9H6X2 564 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms