RNA–Protein interactions for RNA: ENST00000396542.5

TNFSF13-204, Transcript of TNF superfamily member 13, humanhuman

TSL 3 BASIC

Gene TNFSF13, Length 726 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-204ENST00000396542 C3P01024 1663 aa27.2■■□□□ 1.94
TNFSF13-204ENST00000396542 FAM135AQ9P2D6 1515 aa27.2■■□□□ 1.94
TNFSF13-204ENST00000396542 GGT6Q6P531 493 aa27.19■■□□□ 1.94
TNFSF13-204ENST00000396542 PPP6R1Q9UPN7 881 aa27.19■■□□□ 1.94
TNFSF13-204ENST00000396542 MROH1Q8NDA8 1641 aa27.18■■□□□ 1.94
TNFSF13-204ENST00000396542 ROCK1Q13464 1354 aa27.18■■□□□ 1.94
TNFSF13-204ENST00000396542 ESF1Q9H501 851 aaKnown RBP27.15■■□□□ 1.94
TNFSF13-204ENST00000396542 DEPDC5O75140 1603 aa27.15■■□□□ 1.94
TNFSF13-204ENST00000396542 KDM5DQ9BY66 1539 aa27.14■■□□□ 1.94
TNFSF13-204ENST00000396542 ZC3H13Q5T200 1668 aaKnown RBP27.11■■□□□ 1.93
TNFSF13-204ENST00000396542 PRDM15P57071 1507 aaPredicted RBP27.11■■□□□ 1.93
TNFSF13-204ENST00000396542 ITGAEP38570 1179 aa27.09■■□□□ 1.93
TNFSF13-204ENST00000396542 CEBPAP49715 358 aaPredicted RBP27.09■■□□□ 1.93
TNFSF13-204ENST00000396542 ZMYM3Q14202 1370 aa27.09■■□□□ 1.93
TNFSF13-204ENST00000396542 ANKRD50Q9ULJ7 1429 aa27.08■■□□□ 1.93
TNFSF13-204ENST00000396542 ABCC3O15438 1527 aa27.07■■□□□ 1.92
TNFSF13-204ENST00000396542 PLPPR3Q6T4P5 718 aa27.04■■□□□ 1.92
TNFSF13-204ENST00000396542 WASHC2CQ9Y4E1 1318 aa27.04■■□□□ 1.92
TNFSF13-204ENST00000396542 PREX1Q8TCU6 1659 aa27.04■■□□□ 1.92
TNFSF13-204ENST00000396542 CEP152O94986 1710 aa27.04■■□□□ 1.92
TNFSF13-204ENST00000396542 VWDEQ8N2E2 1590 aa27.03■■□□□ 1.92
TNFSF13-204ENST00000396542 SETD1BQ9UPS6 1966 aaKnown RBP27.02■■□□□ 1.92
TNFSF13-204ENST00000396542 NPATQ14207 1427 aa27.02■■□□□ 1.92
TNFSF13-204ENST00000396542 LMTK3Q96Q04 1460 aa27■■□□□ 1.91
TNFSF13-204ENST00000396542 GCC2Q8IWJ2 1684 aa27■■□□□ 1.91
TNFSF13-204ENST00000396542 CAMSAP1Q5T5Y3 1602 aa27■■□□□ 1.91
TNFSF13-204ENST00000396542 UNC13BO14795 1591 aa27■■□□□ 1.91
TNFSF13-204ENST00000396542 PZPP20742 1482 aa26.99■■□□□ 1.91
TNFSF13-204ENST00000396542 LMTK2Q8IWU2 1503 aa26.97■■□□□ 1.91
TNFSF13-204ENST00000396542 NAIPQ13075 1403 aa26.95■■□□□ 1.9
TNFSF13-204ENST00000396542 KANK1Q14678 1352 aa26.95■■□□□ 1.9
TNFSF13-204ENST00000396542 HFM1A2PYH4 1435 aa26.93■■□□□ 1.9
TNFSF13-204ENST00000396542 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.92■■□□□ 1.9
TNFSF13-204ENST00000396542 ARHGAP31Q2M1Z3 1444 aa26.91■■□□□ 1.9
TNFSF13-204ENST00000396542 UHRF1BP1Q6BDS2 1440 aa26.9■■□□□ 1.9
TNFSF13-204ENST00000396542 MYO3AQ8NEV4 1616 aa26.9■■□□□ 1.9
TNFSF13-204ENST00000396542 SPATA31D1Q6ZQQ2 1576 aa26.88■■□□□ 1.89
TNFSF13-204ENST00000396542 IQGAP3Q86VI3 1631 aa26.88■■□□□ 1.89
TNFSF13-204ENST00000396542 EFCAB6Q5THR3 1501 aa26.88■■□□□ 1.89
TNFSF13-204ENST00000396542 ZNF142P52746 1687 aaPredicted RBP26.88■■□□□ 1.89
TNFSF13-204ENST00000396542 TET3O43151 1660 aa26.86■■□□□ 1.89
TNFSF13-204ENST00000396542 FBXO31Q5XUX0 539 aaPredicted RBP26.86■■□□□ 1.89
TNFSF13-204ENST00000396542 ERVK-7P63135 1459 aa26.85■■□□□ 1.89
TNFSF13-204ENST00000396542 TNRQ92752 1358 aa26.83■■□□□ 1.88
TNFSF13-204ENST00000396542 CEP170BQ9Y4F5 1589 aaPredicted RBP26.82■■□□□ 1.88
TNFSF13-204ENST00000396542 CFAP65Q6ZU64 1925 aaKnown RBP26.81■■□□□ 1.88
TNFSF13-204ENST00000396542 HSPA2P54652 639 aa26.78■■□□□ 1.88
TNFSF13-204ENST00000396542 NUP155O75694 1391 aa26.78■■□□□ 1.88
TNFSF13-204ENST00000396542 RPRD2Q5VT52 1461 aaKnown RBP26.78■■□□□ 1.88
TNFSF13-204ENST00000396542 A2ML1A8K2U0 1454 aa26.77■■□□□ 1.88
TNFSF13-204ENST00000396542 NLRP1Q9C000 1473 aa26.77■■□□□ 1.88
TNFSF13-204ENST00000396542 E9PCH4 1651 aa26.76■■□□□ 1.87
TNFSF13-204ENST00000396542 NOS1P29475 1434 aa26.73■■□□□ 1.87
TNFSF13-204ENST00000396542 SYNMO15061 1565 aa26.72■■□□□ 1.87
TNFSF13-204ENST00000396542 STRCQ7RTU9 1775 aa26.71■■□□□ 1.87
TNFSF13-204ENST00000396542 SETD5Q9C0A6 1442 aa26.67■■□□□ 1.86
TNFSF13-204ENST00000396542 UGGT1Q9NYU2 1555 aa26.67■■□□□ 1.86
TNFSF13-204ENST00000396542 UBR1Q8IWV7 1749 aa26.66■■□□□ 1.86
TNFSF13-204ENST00000396542 PLA2R1Q13018 1463 aa26.66■■□□□ 1.86
TNFSF13-204ENST00000396542 KDM5AP29375 1690 aaKnown RBP26.64■■□□□ 1.86
TNFSF13-204ENST00000396542 PIK3C2BO00750 1634 aa26.64■■□□□ 1.85
TNFSF13-204ENST00000396542 SPHKAPQ2M3C7 1700 aa26.6■■□□□ 1.85
TNFSF13-204ENST00000396542 TRIM52Q96A61 297 aa26.6■■□□□ 1.85
TNFSF13-204ENST00000396542 ACIN1Q9UKV3 1341 aaKnown RBP26.59■■□□□ 1.85
TNFSF13-204ENST00000396542 RAB3GAP2Q9H2M9 1393 aa26.58■■□□□ 1.84
TNFSF13-204ENST00000396542 POLR1AO95602 1720 aaPredicted RBP26.57■■□□□ 1.84
TNFSF13-204ENST00000396542 THEMISQ8N1K5 641 aaPredicted RBP26.57■■□□□ 1.84
TNFSF13-204ENST00000396542 SLC52A1Q9NWF4 448 aa26.57■■□□□ 1.84
TNFSF13-204ENST00000396542 PTPRTO14522 1441 aa26.56■■□□□ 1.84
TNFSF13-204ENST00000396542 IDI1Q13907 227 aa26.56■■□□□ 1.84
TNFSF13-204ENST00000396542 ADGRB3O60242 1522 aa26.55■■□□□ 1.84
TNFSF13-204ENST00000396542 SLIT1O75093 1534 aa26.52■■□□□ 1.84
TNFSF13-204ENST00000396542 PKD2Q13563 968 aa26.52■■□□□ 1.84
TNFSF13-204ENST00000396542 SLC4A1APQ9BWU0 796 aaKnown RBP26.52■■□□□ 1.84
TNFSF13-204ENST00000396542 NEURL4Q96JN8 1562 aa26.51■■□□□ 1.83
TNFSF13-204ENST00000396542 TRPM2O94759 1503 aa26.51■■□□□ 1.83
TNFSF13-204ENST00000396542 ARHGAP23Q9P227 1491 aa26.51■■□□□ 1.83
TNFSF13-204ENST00000396542 TMEM131LA2VDJ0 1609 aa26.5■■□□□ 1.83
TNFSF13-204ENST00000396542 DMRT2Q9Y5R5 561 aa26.5■■□□□ 1.83
TNFSF13-204ENST00000396542 MYO5BQ9ULV0 1848 aa26.49■■□□□ 1.83
TNFSF13-204ENST00000396542 NCKAP5LQ9HCH0 1330 aa26.49■■□□□ 1.83
TNFSF13-204ENST00000396542 HRCP23327 699 aa26.49■■□□□ 1.83
TNFSF13-204ENST00000396542 MPHOSPH9Q99550 1183 aa26.47■■□□□ 1.83
TNFSF13-204ENST00000396542 CLTCL1P53675 1640 aa26.46■■□□□ 1.83
TNFSF13-204ENST00000396542 MED14O60244 1454 aa26.45■■□□□ 1.82
TNFSF13-204ENST00000396542 TMEM2Q9UHN6 1383 aa26.45■■□□□ 1.82
TNFSF13-204ENST00000396542 ANKLE2Q86XL3 938 aa26.44■■□□□ 1.82
TNFSF13-204ENST00000396542 STAG3Q9UJ98 1225 aa26.43■■□□□ 1.82
TNFSF13-204ENST00000396542 SCAF11Q99590 1463 aaKnown RBP26.41■■□□□ 1.82
TNFSF13-204ENST00000396542 IQGAP1P46940 1657 aa26.4■■□□□ 1.82
TNFSF13-204ENST00000396542 KIF1BO60333 1816 aa26.38■■□□□ 1.81
TNFSF13-204ENST00000396542 NPHP4O75161 1426 aaPredicted RBP26.38■■□□□ 1.81
TNFSF13-204ENST00000396542 ZFYVE9O95405 1425 aa26.38■■□□□ 1.81
TNFSF13-204ENST00000396542 LTKP29376 864 aa26.37■■□□□ 1.81
TNFSF13-204ENST00000396542 TRIM26Q12899 539 aaPredicted RBP26.37■■□□□ 1.81
TNFSF13-204ENST00000396542 FOXD1Q16676 465 aa26.37■■□□□ 1.81
TNFSF13-204ENST00000396542 TXNDC2Q86VQ3 553 aa26.34■■□□□ 1.81
TNFSF13-204ENST00000396542 EID1Q9Y6B2 187 aa26.34■■□□□ 1.81
TNFSF13-204ENST00000396542 RIMS2Q9UQ26 1411 aa26.32■■□□□ 1.8
TNFSF13-204ENST00000396542 CHGAP10645 457 aaKnown RBP26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms