RNA–Protein interactions for RNA: ENST00000394987.4

C15orf39-202, Transcript of chromosome 15 open reading frame 39, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene C15orf39, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C15orf39-202ENST00000394987 HDGFL2Q7Z4V5 671 aaPredicted RBP17.52■□□□□ 0.39
C15orf39-202ENST00000394987 SPRYD3Q8NCJ5 442 aa17.52■□□□□ 0.39
C15orf39-202ENST00000394987 ARID3AQ99856 593 aa17.51■□□□□ 0.39
C15orf39-202ENST00000394987 KTN1Q86UP2 1357 aaKnown RBP17.5■□□□□ 0.39
C15orf39-202ENST00000394987 HFM1A2PYH4 1435 aa17.49■□□□□ 0.39
C15orf39-202ENST00000394987 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.49■□□□□ 0.39
C15orf39-202ENST00000394987 CCDC146Q8IYE0 955 aa17.49■□□□□ 0.39
C15orf39-202ENST00000394987 DDRGK1Q96HY6 314 aa17.47■□□□□ 0.39
C15orf39-202ENST00000394987 SUPT6HQ7KZ85 1726 aaKnown RBP17.47■□□□□ 0.39
C15orf39-202ENST00000394987 NCLP19338 710 aaKnown RBP17.47■□□□□ 0.39
C15orf39-202ENST00000394987 AMER1Q5JTC6 1135 aaPredicted RBP17.46■□□□□ 0.39
C15orf39-202ENST00000394987 TAOK2Q9UL54 1235 aa17.46■□□□□ 0.39
C15orf39-202ENST00000394987 ARHGEF11O15085 1522 aa17.46■□□□□ 0.39
C15orf39-202ENST00000394987 C9orf84Q5VXU9 1444 aa17.46■□□□□ 0.39
C15orf39-202ENST00000394987 APBB1O00213 710 aa17.46■□□□□ 0.39
C15orf39-202ENST00000394987 DAPK1P53355 1430 aa17.45■□□□□ 0.38
C15orf39-202ENST00000394987 NAIPQ13075 1403 aa17.45■□□□□ 0.38
C15orf39-202ENST00000394987 LTV1Q96GA3 475 aaPredicted RBP17.44■□□□□ 0.38
C15orf39-202ENST00000394987 ANO8Q9HCE9 1232 aaPredicted RBP17.44■□□□□ 0.38
C15orf39-202ENST00000394987 MAP3K1Q13233 1512 aa17.44■□□□□ 0.38
C15orf39-202ENST00000394987 NGDNQ8NEJ9 315 aaKnown RBP17.43■□□□□ 0.38
C15orf39-202ENST00000394987 PANK3Q9H999 370 aa17.43■□□□□ 0.38
C15orf39-202ENST00000394987 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.43■□□□□ 0.38
C15orf39-202ENST00000394987 USP47Q96K76 1375 aa17.42■□□□□ 0.38
C15orf39-202ENST00000394987 CSB-PGBD3P0DP91 1061 aa17.41■□□□□ 0.38
C15orf39-202ENST00000394987 OS9Q13438 667 aaPredicted RBP17.41■□□□□ 0.38
C15orf39-202ENST00000394987 RTF1Q92541 710 aaKnown RBP17.41■□□□□ 0.38
C15orf39-202ENST00000394987 GZF1Q9H116 711 aaPredicted RBP17.41■□□□□ 0.38
C15orf39-202ENST00000394987 SCAPERQ9BY12 1400 aa17.41■□□□□ 0.38
C15orf39-202ENST00000394987 CLUAP1Q96AJ1 413 aa17.41■□□□□ 0.38
C15orf39-202ENST00000394987 ZNF330Q9Y3S2 320 aaPredicted RBP17.41■□□□□ 0.38
C15orf39-202ENST00000394987 EID1Q9Y6B2 187 aa17.41■□□□□ 0.38
C15orf39-202ENST00000394987 NPHP1O15259 732 aa17.41■□□□□ 0.38
C15orf39-202ENST00000394987 RRP7AQ9Y3A4 280 aaKnown RBP17.41■□□□□ 0.38
C15orf39-202ENST00000394987 RAPGEF3O95398 923 aa17.4■□□□□ 0.38
C15orf39-202ENST00000394987 SLC4A3P48751 1232 aa17.4■□□□□ 0.38
C15orf39-202ENST00000394987 PRKRIP1Q9H875 184 aaPredicted RBP17.39■□□□□ 0.38
C15orf39-202ENST00000394987 WDR97A6NE52 1622 aa17.39■□□□□ 0.37
C15orf39-202ENST00000394987 MINK1Q8N4C8 1332 aaPredicted RBP17.39■□□□□ 0.37
C15orf39-202ENST00000394987 RALBP1Q15311 655 aa17.39■□□□□ 0.37
C15orf39-202ENST00000394987 PNNQ9H307 717 aaKnown RBP17.38■□□□□ 0.37
C15orf39-202ENST00000394987 BECN1Q14457 450 aa17.38■□□□□ 0.37
C15orf39-202ENST00000394987 RCAN3Q9UKA8 241 aa17.38■□□□□ 0.37
C15orf39-202ENST00000394987 PRKCSHP14314 528 aaPredicted RBP17.37■□□□□ 0.37
C15orf39-202ENST00000394987 NLRP13Q86W25 1043 aa17.37■□□□□ 0.37
C15orf39-202ENST00000394987 SLKQ9H2G2 1235 aaPredicted RBP17.37■□□□□ 0.37
C15orf39-202ENST00000394987 TERF2IPQ9NYB0 399 aa17.37■□□□□ 0.37
C15orf39-202ENST00000394987 FANCIQ9NVI1 1328 aa17.37■□□□□ 0.37
C15orf39-202ENST00000394987 THOC2Q8NI27 1593 aaKnown RBP17.36■□□□□ 0.37
C15orf39-202ENST00000394987 ABCC5O15440 1437 aa17.35■□□□□ 0.37
C15orf39-202ENST00000394987 NBPF8Q3BBV2 869 aa17.35■□□□□ 0.37
C15orf39-202ENST00000394987 ADAMTS12P58397 1594 aa17.34■□□□□ 0.37
C15orf39-202ENST00000394987 ELL2O00472 640 aaPredicted RBP17.34■□□□□ 0.37
C15orf39-202ENST00000394987 PTPN23Q9H3S7 1636 aa17.33■□□□□ 0.37
C15orf39-202ENST00000394987 EIF3AQ14152 1382 aaKnown RBP17.32■□□□□ 0.36
C15orf39-202ENST00000394987 WASHC2AQ641Q2 1341 aa17.32■□□□□ 0.36
C15orf39-202ENST00000394987 CAMSAP2Q08AD1 1489 aa17.32■□□□□ 0.36
C15orf39-202ENST00000394987 VGFO15240 615 aaPredicted RBP17.32■□□□□ 0.36
C15orf39-202ENST00000394987 DNTTIP2Q5QJE6 756 aaKnown RBP17.32■□□□□ 0.36
C15orf39-202ENST00000394987 EIF4G3O43432 1585 aaKnown RBP17.32■□□□□ 0.36
C15orf39-202ENST00000394987 WDR62O43379 1518 aa17.32■□□□□ 0.36
C15orf39-202ENST00000394987 IPO9Q96P70 1041 aaKnown RBP17.31■□□□□ 0.36
C15orf39-202ENST00000394987 NUP153P49790 1475 aaKnown RBP17.31■□□□□ 0.36
C15orf39-202ENST00000394987 TMEM132EQ6IEE7 984 aa17.31■□□□□ 0.36
C15orf39-202ENST00000394987 BCL2L13Q9BXK5 485 aa17.31■□□□□ 0.36
C15orf39-202ENST00000394987 AMPHP49418 695 aa17.31■□□□□ 0.36
C15orf39-202ENST00000394987 KIAA1107Q9UPP5 1409 aa17.3■□□□□ 0.36
C15orf39-202ENST00000394987 ZBED9Q6R2W3 1325 aa17.3■□□□□ 0.36
C15orf39-202ENST00000394987 PLEKHH2Q8IVE3 1493 aa17.29■□□□□ 0.36
C15orf39-202ENST00000394987 ROCK1Q13464 1354 aa17.29■□□□□ 0.36
C15orf39-202ENST00000394987 MS4A1P11836 297 aa17.29■□□□□ 0.36
C15orf39-202ENST00000394987 NBPF1Q3BBV0 1214 aa17.29■□□□□ 0.36
C15orf39-202ENST00000394987 ATP10BO94823 1461 aa17.29■□□□□ 0.36
C15orf39-202ENST00000394987 KIF7Q2M1P5 1343 aa17.29■□□□□ 0.36
C15orf39-202ENST00000394987 ITPRIPQ8IWB1 547 aa17.29■□□□□ 0.36
C15orf39-202ENST00000394987 CTTNBP2Q8WZ74 1663 aa17.29■□□□□ 0.36
C15orf39-202ENST00000394987 GOLGA2Q08379 1002 aa17.28■□□□□ 0.36
C15orf39-202ENST00000394987 PTPRKQ15262 1439 aa17.28■□□□□ 0.36
C15orf39-202ENST00000394987 KCNJ4P48050 445 aa17.27■□□□□ 0.36
C15orf39-202ENST00000394987 CCDC9Q9Y3X0 531 aaKnown RBP17.27■□□□□ 0.36
C15orf39-202ENST00000394987 PTMAP06454 111 aaKnown RBP17.27■□□□□ 0.35
C15orf39-202ENST00000394987 PLCB2Q00722 1185 aa17.27■□□□□ 0.35
C15orf39-202ENST00000394987 NCOA1Q15788 1441 aa17.26■□□□□ 0.35
C15orf39-202ENST00000394987 CASC1Q6TDU7 716 aa17.26■□□□□ 0.35
C15orf39-202ENST00000394987 SMC4Q9NTJ3 1288 aa17.26■□□□□ 0.35
C15orf39-202ENST00000394987 ABCA5Q8WWZ7 1642 aa17.26■□□□□ 0.35
C15orf39-202ENST00000394987 UGGT2Q9NYU1 1516 aa17.25■□□□□ 0.35
C15orf39-202ENST00000394987 PLIN1O60240 522 aa17.25■□□□□ 0.35
C15orf39-202ENST00000394987 CFAP70Q5T0N1 1121 aa17.25■□□□□ 0.35
C15orf39-202ENST00000394987 IL27Q8NEV9 243 aa17.25■□□□□ 0.35
C15orf39-202ENST00000394987 CCDC141Q6ZP82 1450 aa17.25■□□□□ 0.35
C15orf39-202ENST00000394987 GPATCH8Q9UKJ3 1502 aaKnown RBP17.25■□□□□ 0.35
C15orf39-202ENST00000394987 SLC4A10Q6U841 1118 aa17.24■□□□□ 0.35
C15orf39-202ENST00000394987 CCDC7Q96M83 1385 aa17.24■□□□□ 0.35
C15orf39-202ENST00000394987 NAP1L2Q9ULW6 460 aaPredicted RBP17.24■□□□□ 0.35
C15orf39-202ENST00000394987 KIF14Q15058 1648 aa17.24■□□□□ 0.35
C15orf39-202ENST00000394987 VSIG10Q8N0Z9 540 aa17.24■□□□□ 0.35
C15orf39-202ENST00000394987 RAPGEF6Q8TEU7 1601 aa17.23■□□□□ 0.35
C15orf39-202ENST00000394987 FGD1P98174 961 aa17.23■□□□□ 0.35
C15orf39-202ENST00000394987 CCDC184Q52MB2 194 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms