RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 ROCK2O75116 1388 aaKnown RBP17.48■□□□□ 0.39
NFKB1-202ENST00000394820 CHGAP10645 457 aaKnown RBP17.48■□□□□ 0.39
NFKB1-202ENST00000394820 NUDCQ9Y266 331 aa17.46■□□□□ 0.39
NFKB1-202ENST00000394820 SPRYD3Q8NCJ5 442 aa17.45■□□□□ 0.38
NFKB1-202ENST00000394820 PZPP20742 1482 aa17.43■□□□□ 0.38
NFKB1-202ENST00000394820 KDM5BQ9UGL1 1544 aa17.43■□□□□ 0.38
NFKB1-202ENST00000394820 RCAN3Q9UKA8 241 aa17.43■□□□□ 0.38
NFKB1-202ENST00000394820 AFAP1Q8N556 730 aa17.43■□□□□ 0.38
NFKB1-202ENST00000394820 TNNT2P45379 298 aaPredicted RBP17.41■□□□□ 0.38
NFKB1-202ENST00000394820 DNMT1P26358 1616 aaKnown RBP17.41■□□□□ 0.38
NFKB1-202ENST00000394820 WDR43Q15061 677 aaKnown RBP eCLIP17.4■□□□□ 0.38
NFKB1-202ENST00000394820 ZBED9Q6R2W3 1325 aa17.39■□□□□ 0.37
NFKB1-202ENST00000394820 GCC2Q8IWJ2 1684 aa17.39■□□□□ 0.37
NFKB1-202ENST00000394820 EFCAB2Q5VUJ9 269 aa17.39■□□□□ 0.37
NFKB1-202ENST00000394820 CDCA7LQ96GN5 454 aa17.39■□□□□ 0.37
NFKB1-202ENST00000394820 PDE4AP27815 886 aa17.38■□□□□ 0.37
NFKB1-202ENST00000394820 CCDC144AA2RUR9 1427 aa17.38■□□□□ 0.37
NFKB1-202ENST00000394820 TEX14Q8IWB6 1497 aa17.38■□□□□ 0.37
NFKB1-202ENST00000394820 NUP160Q12769 1436 aa17.37■□□□□ 0.37
NFKB1-202ENST00000394820 ARHGAP5Q13017 1502 aa17.36■□□□□ 0.37
NFKB1-202ENST00000394820 FRAT1Q92837 279 aaPredicted RBP17.35■□□□□ 0.37
NFKB1-202ENST00000394820 SLKQ9H2G2 1235 aaPredicted RBP17.34■□□□□ 0.37
NFKB1-202ENST00000394820 ARID4BQ4LE39 1312 aaPredicted RBP17.34■□□□□ 0.37
NFKB1-202ENST00000394820 KIF3BO15066 747 aa17.33■□□□□ 0.37
NFKB1-202ENST00000394820 SPAG9O60271 1321 aaKnown RBP17.33■□□□□ 0.36
NFKB1-202ENST00000394820 PANK3Q9H999 370 aa17.32■□□□□ 0.36
NFKB1-202ENST00000394820 ERICH6BQ5W0A0 696 aa17.31■□□□□ 0.36
NFKB1-202ENST00000394820 BRPF3Q9ULD4 1205 aa17.31■□□□□ 0.36
NFKB1-202ENST00000394820 RSPH4AQ5TD94 716 aa17.31■□□□□ 0.36
NFKB1-202ENST00000394820 CCDC146Q8IYE0 955 aa17.31■□□□□ 0.36
NFKB1-202ENST00000394820 CRBNQ96SW2 442 aa17.29■□□□□ 0.36
NFKB1-202ENST00000394820 PPM1GO15355 546 aaPredicted RBP17.29■□□□□ 0.36
NFKB1-202ENST00000394820 PLEKHH2Q8IVE3 1493 aa17.28■□□□□ 0.36
NFKB1-202ENST00000394820 GZF1Q9H116 711 aaPredicted RBP17.28■□□□□ 0.36
NFKB1-202ENST00000394820 PNISRQ8TF01 805 aaKnown RBP17.27■□□□□ 0.36
NFKB1-202ENST00000394820 RRP1P56182 461 aaKnown RBP17.27■□□□□ 0.36
NFKB1-202ENST00000394820 SPATA31E1Q6ZUB1 1445 aa17.27■□□□□ 0.35
NFKB1-202ENST00000394820 NPM1P06748 294 aaKnown RBP eCLIP17.27■□□□□ 0.35
NFKB1-202ENST00000394820 TMF1P82094 1093 aa17.27■□□□□ 0.35
NFKB1-202ENST00000394820 NUTM2DQ5VT03 806 aaPredicted RBP17.27■□□□□ 0.35
NFKB1-202ENST00000394820 GGT6Q6P531 493 aa17.26■□□□□ 0.35
NFKB1-202ENST00000394820 CCDC141Q6ZP82 1450 aa17.26■□□□□ 0.35
NFKB1-202ENST00000394820 ITSN2Q9NZM3 1697 aa17.25■□□□□ 0.35
NFKB1-202ENST00000394820 KNSTRNQ9Y448 316 aa17.24■□□□□ 0.35
NFKB1-202ENST00000394820 KTN1Q86UP2 1357 aaKnown RBP17.24■□□□□ 0.35
NFKB1-202ENST00000394820 ABCC10Q5T3U5 1492 aa17.24■□□□□ 0.35
NFKB1-202ENST00000394820 MYBBP1AQ9BQG0 1328 aaKnown RBP17.24■□□□□ 0.35
NFKB1-202ENST00000394820 SYCP2Q9BX26 1530 aa17.24■□□□□ 0.35
NFKB1-202ENST00000394820 DHX29Q7Z478 1369 aaKnown RBP17.23■□□□□ 0.35
NFKB1-202ENST00000394820 TCERG1O14776 1098 aaKnown RBP17.23■□□□□ 0.35
NFKB1-202ENST00000394820 DDRGK1Q96HY6 314 aa17.22■□□□□ 0.35
NFKB1-202ENST00000394820 RALBP1Q15311 655 aa17.22■□□□□ 0.35
NFKB1-202ENST00000394820 NLRP13Q86W25 1043 aa17.2■□□□□ 0.34
NFKB1-202ENST00000394820 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.2■□□□□ 0.34
NFKB1-202ENST00000394820 ERCC6L2Q5T890 1561 aa17.2■□□□□ 0.34
NFKB1-202ENST00000394820 ADGRL2O95490 1459 aa17.2■□□□□ 0.34
NFKB1-202ENST00000394820 ABCA8O94911 1581 aa17.2■□□□□ 0.34
NFKB1-202ENST00000394820 CLUAP1Q96AJ1 413 aa17.19■□□□□ 0.34
NFKB1-202ENST00000394820 MBD5Q9P267 1494 aa17.18■□□□□ 0.34
NFKB1-202ENST00000394820 BCL2L13Q9BXK5 485 aa17.18■□□□□ 0.34
NFKB1-202ENST00000394820 HSP90AA1P07900 732 aaKnown RBP17.18■□□□□ 0.34
NFKB1-202ENST00000394820 SAFB2Q14151 953 aaKnown RBP eCLIP17.18■□□□□ 0.34
NFKB1-202ENST00000394820 PRKCSHP14314 528 aaPredicted RBP17.16■□□□□ 0.34
NFKB1-202ENST00000394820 UPF2Q9HAU5 1272 aaKnown RBP17.16■□□□□ 0.34
NFKB1-202ENST00000394820 FAM135AQ9P2D6 1515 aa17.16■□□□□ 0.34
NFKB1-202ENST00000394820 DISP3Q9P2K9 1392 aa17.15■□□□□ 0.34
NFKB1-202ENST00000394820 CFAP70Q5T0N1 1121 aa17.15■□□□□ 0.34
NFKB1-202ENST00000394820 CDC42BPAQ5VT25 1732 aa17.15■□□□□ 0.34
NFKB1-202ENST00000394820 TRAPPC8Q9Y2L5 1435 aa17.15■□□□□ 0.34
NFKB1-202ENST00000394820 RRP7AQ9Y3A4 280 aaKnown RBP17.14■□□□□ 0.33
NFKB1-202ENST00000394820 SCAPERQ9BY12 1400 aa17.14■□□□□ 0.33
NFKB1-202ENST00000394820 C20orf194Q5TEA3 1177 aa17.14■□□□□ 0.33
NFKB1-202ENST00000394820 TPRNQ4KMQ1 711 aa17.13■□□□□ 0.33
NFKB1-202ENST00000394820 NFKBIBQ15653 356 aa17.13■□□□□ 0.33
NFKB1-202ENST00000394820 TRAK1Q9UPV9 953 aa17.12■□□□□ 0.33
NFKB1-202ENST00000394820 BCORL1Q5H9F3 1711 aa17.12■□□□□ 0.33
NFKB1-202ENST00000394820 RALGAPBQ86X10 1494 aa17.12■□□□□ 0.33
NFKB1-202ENST00000394820 NAP1L5Q96NT1 182 aaPredicted RBP17.12■□□□□ 0.33
NFKB1-202ENST00000394820 FRAT2O75474 233 aaPredicted RBP17.11■□□□□ 0.33
NFKB1-202ENST00000394820 GSE1Q14687 1217 aa17.11■□□□□ 0.33
NFKB1-202ENST00000394820 ADGBQ8N7X0 1667 aa17.11■□□□□ 0.33
NFKB1-202ENST00000394820 SAMD9LQ8IVG5 1584 aa17.11■□□□□ 0.33
NFKB1-202ENST00000394820 ADAMTS8Q9UP79 889 aa17.1■□□□□ 0.33
NFKB1-202ENST00000394820 KANK1Q14678 1352 aa17.1■□□□□ 0.33
NFKB1-202ENST00000394820 TESK2Q96S53 571 aa17.09■□□□□ 0.33
NFKB1-202ENST00000394820 PRAG1Q86YV5 1406 aa17.09■□□□□ 0.33
NFKB1-202ENST00000394820 SHANK2Q9UPX8 1470 aa17.09■□□□□ 0.33
NFKB1-202ENST00000394820 TMEM132EQ6IEE7 984 aa17.08■□□□□ 0.33
NFKB1-202ENST00000394820 TTC37Q6PGP7 1564 aa17.08■□□□□ 0.32
NFKB1-202ENST00000394820 ZBTB7CA1YPR0 619 aa17.08■□□□□ 0.32
NFKB1-202ENST00000394820 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.07■□□□□ 0.32
NFKB1-202ENST00000394820 BRD4O60885 1362 aaPredicted RBP17.07■□□□□ 0.32
NFKB1-202ENST00000394820 BACH2Q9BYV9 841 aa17.07■□□□□ 0.32
NFKB1-202ENST00000394820 STK26Q9P289 416 aa17.06■□□□□ 0.32
NFKB1-202ENST00000394820 SLC24A1O60721 1099 aa17.06■□□□□ 0.32
NFKB1-202ENST00000394820 COG6Q9Y2V7 657 aa17.06■□□□□ 0.32
NFKB1-202ENST00000394820 ERBINQ96RT1 1412 aa17.06■□□□□ 0.32
NFKB1-202ENST00000394820 CHD1O14646 1710 aa17.06■□□□□ 0.32
NFKB1-202ENST00000394820 FOXD4L1Q9NU39 408 aa17.05■□□□□ 0.32
NFKB1-202ENST00000394820 ARHGEF12Q9NZN5 1544 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms